BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018159
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]               59   2e-11
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    59   2e-11
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...    55   1e-10
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-10
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...    43   2e-07

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 58.5 bits (140), Expect(2) = 2e-11
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 578 NNINSSTQYQPISQMHAHAIPLAGQLWLSSGSQSAPVVPATQLMGQQPSV 727
           + IN+S Q+QPISQMHA   P+ GQ WLSSGSQS  +V      GQQPSV
Sbjct: 157 STINASAQFQPISQMHA---PVGGQPWLSSGSQSGALVTPVHQAGQQPSV 203



 Score = 36.6 bits (83), Expect(2) = 2e-11
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +1

Query: 802 RRYYFNKKTERFSWEKPRDIM 864
           RRYY+NKKT   SWEKP ++M
Sbjct: 232 RRYYYNKKTRLSSWEKPLELM 252


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 58.5 bits (140), Expect(2) = 2e-11
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 578 NNINSSTQYQPISQMHAHAIPLAGQLWLSSGSQSAPVVPATQLMGQQPSV 727
           + IN+S Q+QPISQMHA   P+ GQ WLSSGSQS  +V      GQQPSV
Sbjct: 159 STINASAQFQPISQMHA---PVGGQPWLSSGSQSGALVTPVHQAGQQPSV 205



 Score = 36.6 bits (83), Expect(2) = 2e-11
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +1

Query: 802 RRYYFNKKTERFSWEKPRDIM 864
           RRYY+NKKT   SWEKP ++M
Sbjct: 236 RRYYYNKKTRLSSWEKPLELM 256


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
           gi|223550756|gb|EEF52242.1| protein binding protein,
           putative [Ricinus communis]
          Length = 970

 Score = 55.5 bits (132), Expect(2) = 1e-10
 Identities = 27/54 (50%), Positives = 32/54 (59%)
 Frame = +2

Query: 578 NNINSSTQYQPISQMHAHAIPLAGQLWLSSGSQSAPVVPATQLMGQQPSVVVSA 739
           NN  SS+Q+QP+ QMH   +P  GQ WL SGS    V    Q  GQQPSV  S+
Sbjct: 111 NNAISSSQFQPMPQMHTPVVPAGGQHWLPSGSNGVAVATPVQPTGQQPSVSSSS 164



 Score = 37.0 bits (84), Expect(2) = 1e-10
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +1

Query: 802 RRYYFNKKTERFSWEKPRDIM 864
           RRYY+NK+T++ SWEKP ++M
Sbjct: 188 RRYYYNKRTKQSSWEKPLELM 208


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score = 57.8 bits (138), Expect(2) = 2e-10
 Identities = 26/56 (46%), Positives = 37/56 (66%)
 Frame = +2

Query: 572 SSNNINSSTQYQPISQMHAHAIPLAGQLWLSSGSQSAPVVPATQLMGQQPSVVVSA 739
           + N+ ++  Q+ P+SQMHAH +P+ GQ WLSSGS  A +VP  Q    QPS+  S+
Sbjct: 129 TQNSASALPQFPPMSQMHAHVVPMGGQPWLSSGSHGASLVPPVQPTVVQPSISSSS 184



 Score = 34.3 bits (77), Expect(2) = 2e-10
 Identities = 11/21 (52%), Positives = 19/21 (90%)
 Frame = +1

Query: 802 RRYYFNKKTERFSWEKPRDIM 864
           RRYY+N++T++ SW+KP ++M
Sbjct: 210 RRYYYNRRTKQSSWDKPFELM 230


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
           gi|223538712|gb|EEF40313.1| protein binding protein,
           putative [Ricinus communis]
          Length = 956

 Score = 42.7 bits (99), Expect(3) = 2e-07
 Identities = 25/62 (40%), Positives = 33/62 (53%)
 Frame = +2

Query: 587 NSSTQYQPISQMHAHAIPLAGQLWLSSGSQSAPVVPATQLMGQQPSVVVSAIPSTVTRDL 766
           N+ +QYQPISQM   +IP  G    SS +QS   V   QL G+Q SV     P+    + 
Sbjct: 140 NTVSQYQPISQMRPPSIPAGGLAGSSSVNQSITPVTPMQLNGEQSSVTNDLHPTKPNEET 199

Query: 767 TI 772
           T+
Sbjct: 200 TM 201



 Score = 36.2 bits (82), Expect(3) = 2e-07
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +1

Query: 802 RRYYFNKKTERFSWEKPRDIM 864
           RRYY+NK+T + SWEKP ++M
Sbjct: 212 RRYYYNKRTRQSSWEKPFELM 232



 Score = 21.6 bits (44), Expect(3) = 2e-07
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 549 FAPSSYGKAPI 581
           F PSSYG+ P+
Sbjct: 127 FVPSSYGQPPV 137