BLASTX nr result

ID: Coptis25_contig00018142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018142
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16509.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   105   4e-21
ref|XP_002532062.1| Glucan endo-1,3-beta-glucosidase precursor, ...   101   5e-20
gb|AFK45712.1| unknown [Lotus japonicus]                               94   1e-17
ref|XP_002297638.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>emb|CBI16509.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = -3

Query: 439 PCYEPDTLPNHASFAYNDYYHKMQSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXG 260
           PCY P+T  NHAS+AYNDYY KM+S GGTCDF GTA  T  DPS+GSC+F+        G
Sbjct: 252 PCYSPNTYQNHASYAYNDYYQKMRSGGGTCDFRGTATTTTADPSYGSCIFSGSSNSSSSG 311

Query: 259 AITPFSAFGPVSPETARSTTMHVSEVAFLIPAILVL 152
             +P SAF P S  ++RS T+ V  +  LIPA+L++
Sbjct: 312 GTSPSSAFAPES-LSSRSPTLQVPRLGVLIPAMLLI 346


>ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Vitis vinifera]
          Length = 676

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/96 (53%), Positives = 65/96 (67%)
 Frame = -3

Query: 439 PCYEPDTLPNHASFAYNDYYHKMQSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXG 260
           PCY P+T  NHAS+AYNDYY KM+S GGTCDF GTA  T  DPS+GSC+F+        G
Sbjct: 396 PCYSPNTYQNHASYAYNDYYQKMRSGGGTCDFRGTATTTTADPSYGSCIFSGSSNSSSSG 455

Query: 259 AITPFSAFGPVSPETARSTTMHVSEVAFLIPAILVL 152
             +P SAF P S  ++RS T+ V  +  LIPA+L++
Sbjct: 456 GTSPSSAFAPES-LSSRSPTLQVPRLGVLIPAMLLI 490


>ref|XP_002532062.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223528266|gb|EEF30317.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 436

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = -3

Query: 439 PCYEPDTLPNHASFAYNDYYHKMQSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXG 260
           PCY P+ + NHAS+AYNDYY KM SAGGTCDF G+A  T VDPS+GSC+F         G
Sbjct: 336 PCYAPNNIQNHASYAYNDYYQKMHSAGGTCDFDGSATTTTVDPSYGSCIFTGSSNSSTSG 395

Query: 259 AITPFSAFGPVSPE-TARSTTMHVSEVAFLIPAILVLF 149
            I P  AFGP+SP+  + S     S+V  L+ A  + F
Sbjct: 396 GIFPPVAFGPISPQGGSTSLRFQASKVQSLLSAAFLAF 433


>gb|AFK45712.1| unknown [Lotus japonicus]
          Length = 336

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/97 (51%), Positives = 61/97 (62%)
 Frame = -3

Query: 439 PCYEPDTLPNHASFAYNDYYHKMQSAGGTCDFGGTAMFTDVDPSHGSCVFAXXXXXXXXG 260
           PCY P+ L +HAS+AYNDYY K  +AGGTCDF GTA  T  DPSHGSC+F+        G
Sbjct: 238 PCYLPNDLKSHASYAYNDYYQKKNNAGGTCDFDGTAEVTTQDPSHGSCIFS--GSSNPGG 295

Query: 259 AITPFSAFGPVSPETARSTTMHVSEVAFLIPAILVLF 149
              P +A GP SP  A S  + V+ + +LI AI V F
Sbjct: 296 VSLPPTALGPSSPFGA-SMNLQVTSLQYLISAIAVFF 331


>ref|XP_002297638.1| predicted protein [Populus trichocarpa] gi|222844896|gb|EEE82443.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = -3

Query: 439 PCYEPDTLPNHASFAYNDYYHKMQSAGGTCDFGGTAMFTDVDPSHGSCVF--AXXXXXXX 266
           PCY P+T  NHAS+AYNDYY K +S G TCDF GTA  T VDPS+GSC F  +       
Sbjct: 359 PCYLPNTYQNHASYAYNDYYKKKRSVGATCDFDGTAATTTVDPSYGSCKFTGSSTITPNS 418

Query: 265 XGAITPFSAFGPVSPETARST-TMHVSEVAFLIPAILV 155
            G  T   A GPV+P+   +T  + VS++ FLI A+ +
Sbjct: 419 NGGFTTTVAPGPVTPQGGSATVNLPVSKIQFLISAVFL 456


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