BLASTX nr result

ID: Coptis25_contig00018141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018141
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284723.1| PREDICTED: CASP-like protein At3g23200 isofo...   217   2e-54
gb|AFK35149.1| unknown [Lotus japonicus]                              202   6e-50
ref|XP_002529297.1| conserved hypothetical protein [Ricinus comm...   199   4e-49
ref|XP_002315710.1| predicted protein [Populus trichocarpa] gi|2...   198   8e-49
ref|XP_003536249.1| PREDICTED: CASP-like protein At3g23200-like ...   196   3e-48

>ref|XP_002284723.1| PREDICTED: CASP-like protein At3g23200 isoform 1 [Vitis vinifera]
           gi|296083617|emb|CBI23606.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  217 bits (553), Expect = 2e-54
 Identities = 107/152 (70%), Positives = 122/152 (80%), Gaps = 2/152 (1%)
 Frame = +2

Query: 158 MKVFPGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGL 337
           MK FPGTPGT+TGL LRI QC+ AAGSIASMATT++FFS TAFCYLIASMGLQV+WSFGL
Sbjct: 1   MKDFPGTPGTWTGLILRISQCMFAAGSIASMATTSSFFSVTAFCYLIASMGLQVIWSFGL 60

Query: 338 AWLDAYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXXGLTVLFFRDLGTCI--GD 511
           A+LDAYAL KK V+HNPV+VSLFVVGDWVTA           G+TVL++ D G C    +
Sbjct: 61  AFLDAYALVKKKVLHNPVLVSLFVVGDWVTATLSLAAASASAGITVLYYSDFGDCDFGKE 120

Query: 512 CSKYQFAVTLAFLSWVMIAVSSLIMFWILATG 607
           C KYQ +V LAFLSW+MIA SSLIMFW+LA G
Sbjct: 121 CQKYQISVALAFLSWIMIATSSLIMFWLLAAG 152


>gb|AFK35149.1| unknown [Lotus japonicus]
          Length = 152

 Score =  202 bits (514), Expect = 6e-50
 Identities = 103/152 (67%), Positives = 119/152 (78%), Gaps = 2/152 (1%)
 Frame = +2

Query: 158 MKVFPGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGL 337
           MK FPGTPGT  GLALR+ Q + AAGSIASM TT +FF++TAFCYLIASMGLQV+WSF L
Sbjct: 1   MKDFPGTPGTGLGLALRMAQFIFAAGSIASMTTTPSFFNFTAFCYLIASMGLQVIWSFML 60

Query: 338 AWLDAYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXXGLTVLFFRDLGTC-IGD- 511
           A LDAYAL KK V+HNP++VSLFVVGDWVTAI          G+TVL+F DLG C  G+ 
Sbjct: 61  ALLDAYALVKKKVLHNPLLVSLFVVGDWVTAILSLAAASSSGGITVLYFHDLGHCRFGEG 120

Query: 512 CSKYQFAVTLAFLSWVMIAVSSLIMFWILATG 607
           C KYQ +V LAFLSW+ I++SSLIM WILA G
Sbjct: 121 CRKYQISVALAFLSWIPISISSLIMLWILAAG 152


>ref|XP_002529297.1| conserved hypothetical protein [Ricinus communis]
           gi|223531221|gb|EEF33066.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score =  199 bits (507), Expect = 4e-49
 Identities = 98/152 (64%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
 Frame = +2

Query: 158 MKVFPGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGL 337
           MK F GTPGT T L LRI QC+ AAGSI +MATT+ FF++TAFCYLIASMGLQV+WS GL
Sbjct: 1   MKDFAGTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAFCYLIASMGLQVIWSLGL 60

Query: 338 AWLDAYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXXGLTVLFFRDLGTC--IGD 511
           A LDAYAL +K V+HN ++VSLFVVGDWVTA           G+TVL F D+G C  + +
Sbjct: 61  ALLDAYALIRKKVLHNSILVSLFVVGDWVTATLSLAAASASAGITVLLFHDVGHCNYLTE 120

Query: 512 CSKYQFAVTLAFLSWVMIAVSSLIMFWILATG 607
           C KYQ +V LAFLSW+ IA+SSLIM WILA G
Sbjct: 121 CQKYQMSVALAFLSWITIAISSLIMLWILAAG 152


>ref|XP_002315710.1| predicted protein [Populus trichocarpa] gi|222864750|gb|EEF01881.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  198 bits (504), Expect = 8e-49
 Identities = 94/152 (61%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
 Frame = +2

Query: 158 MKVFPGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGL 337
           M+ F G PGT TGLALR+ QC+ AAGSIA+M TTTNFF+ T+FCYLIASMGLQ++WSFGL
Sbjct: 1   MRDFAGAPGTLTGLALRLSQCVFAAGSIAAMTTTTNFFNSTSFCYLIASMGLQIIWSFGL 60

Query: 338 AWLDAYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXXGLTVLFFRDLGTC--IGD 511
             LDAYAL +K  +HN V++SLFVVGDWVTAI          G+TVL+F DLG+C  + +
Sbjct: 61  TLLDAYALVRKRTLHNTVLLSLFVVGDWVTAILSLAAASASAGITVLYFHDLGSCGFVRE 120

Query: 512 CSKYQFAVTLAFLSWVMIAVSSLIMFWILATG 607
           C KYQ +V LAF SW+  A+SSLIM W+ A G
Sbjct: 121 CQKYQMSVALAFFSWITTAISSLIMLWLFAAG 152


>ref|XP_003536249.1| PREDICTED: CASP-like protein At3g23200-like [Glycine max]
          Length = 152

 Score =  196 bits (499), Expect = 3e-48
 Identities = 101/152 (66%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
 Frame = +2

Query: 158 MKVFPGTPGTYTGLALRILQCLLAAGSIASMATTTNFFSYTAFCYLIASMGLQVLWSFGL 337
           MK FPGTPGT  GLALRI Q + AAGSIASMATT +FF++TAFCYLIASMGLQV+WSF L
Sbjct: 1   MKDFPGTPGTVLGLALRISQFVFAAGSIASMATTPSFFNFTAFCYLIASMGLQVIWSFVL 60

Query: 338 AWLDAYALAKKTVIHNPVMVSLFVVGDWVTAIXXXXXXXXXXGLTVLFFRDLGTCI--GD 511
           A LDAYAL KK V+HN V+VSLFVVGDWVTA           G+TVL+F DLG C    +
Sbjct: 61  ALLDAYALVKKKVLHNAVLVSLFVVGDWVTATLSLAAASSSAGITVLYFNDLGHCHFGEE 120

Query: 512 CSKYQFAVTLAFLSWVMIAVSSLIMFWILATG 607
           C KY  +V LAFLSW  I++SSLIM W+LA G
Sbjct: 121 CQKYLISVALAFLSWFPISISSLIMLWLLAAG 152


Top