BLASTX nr result

ID: Coptis25_contig00018140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018140
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236790.1| uncharacterized protein LOC100305795 [Glycin...   229   5e-58
ref|XP_002277907.1| PREDICTED: UPF0133 protein Synpcc7942_0464 [...   229   7e-58
ref|XP_003540114.1| PREDICTED: UPF0133 protein Synpcc7942_0464-l...   228   1e-57
gb|AAM62959.1| unknown [Arabidopsis thaliana] gi|32892213|gb|AAP...   227   3e-57
ref|NP_194791.1| uncharacterized protein [Arabidopsis thaliana] ...   226   5e-57

>ref|NP_001236790.1| uncharacterized protein LOC100305795 [Glycine max]
           gi|255626621|gb|ACU13655.1| unknown [Glycine max]
          Length = 195

 Score =  229 bits (584), Expect = 5e-58
 Identities = 120/137 (87%), Positives = 127/137 (92%), Gaps = 1/137 (0%)
 Frame = +3

Query: 162 RVYCLFGGKKDNNNEKSDDGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEF 341
           R+Y LFGGKKDNN  KSDD  SKAGILGNMQNLYETVKKAQMVVQVEA RVQKELA AEF
Sbjct: 60  RLYALFGGKKDNNG-KSDDVPSKAGILGNMQNLYETVKKAQMVVQVEAARVQKELAAAEF 118

Query: 342 DGYCEGELIKVTLSGNQQPIRTEITEAAMELGSEKLSLLVTEAYRDAHQKSVLAMKERMS 521
           DGYCEGEL+KVTLSGNQQP+RTEITEAAMELGSEKLSLL+TEAY+DAHQKSV AMKERM+
Sbjct: 119 DGYCEGELVKVTLSGNQQPVRTEITEAAMELGSEKLSLLITEAYKDAHQKSVQAMKERMN 178

Query: 522 NLAQSLGMPQGL-EGLK 569
           +LAQSLGMP GL EGLK
Sbjct: 179 DLAQSLGMPPGLSEGLK 195


>ref|XP_002277907.1| PREDICTED: UPF0133 protein Synpcc7942_0464 [Vitis vinifera]
           gi|297743656|emb|CBI36539.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  229 bits (583), Expect = 7e-58
 Identities = 138/198 (69%), Positives = 151/198 (76%), Gaps = 22/198 (11%)
 Frame = +3

Query: 42  MASTTAFTLQISPL-------NARTTSLRG-KLKPIGLSLTYPRV-------------RY 158
           MAST+A T QIS L       N  ++SL   KL P   +L   R+             R 
Sbjct: 1   MASTSALTTQISNLCGFTDCKNTTSSSLFFCKLSP-NTNLVSTRMFCQYADSRMGNNRRS 59

Query: 159 PRVYCLFGGKKDNNNEKSDDGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAE 338
            RVY LFGG K+N+ EK DD +SKAG LGNMQNLYETVKKAQMVVQVEAV+VQKELA AE
Sbjct: 60  VRVYGLFGGNKENS-EKGDDARSKAGFLGNMQNLYETVKKAQMVVQVEAVKVQKELAEAE 118

Query: 339 FDGYCEGELIKVTLSGNQQPIRTEITEAAMELGSEKLSLLVTEAYRDAHQKSVLAMKERM 518
           FDGYCEGELIKVTLSGNQQP+RTEITEAAMELG EKLSLLVTEAY+DAHQKSV AMKERM
Sbjct: 119 FDGYCEGELIKVTLSGNQQPVRTEITEAAMELGPEKLSLLVTEAYKDAHQKSVQAMKERM 178

Query: 519 SNLAQSLGMPQGL-EGLK 569
           ++LAQSLGMPQGL EGLK
Sbjct: 179 NDLAQSLGMPQGLSEGLK 196


>ref|XP_003540114.1| PREDICTED: UPF0133 protein Synpcc7942_0464-like [Glycine max]
          Length = 196

 Score =  228 bits (581), Expect = 1e-57
 Identities = 119/137 (86%), Positives = 127/137 (92%), Gaps = 1/137 (0%)
 Frame = +3

Query: 162 RVYCLFGGKKDNNNEKSDDGQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEF 341
           R+Y LFGGKKDN+  KSDD  SKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELA AEF
Sbjct: 61  RLYALFGGKKDNSG-KSDDAPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEF 119

Query: 342 DGYCEGELIKVTLSGNQQPIRTEITEAAMELGSEKLSLLVTEAYRDAHQKSVLAMKERMS 521
           DGYCEGEL+KVTLSGNQQP+RTEITEAAMELG EKLSLL+TEAY+DAHQKSV AMKERM+
Sbjct: 120 DGYCEGELVKVTLSGNQQPVRTEITEAAMELGPEKLSLLITEAYKDAHQKSVQAMKERMN 179

Query: 522 NLAQSLGMPQGL-EGLK 569
           +LAQSLGMP GL EGLK
Sbjct: 180 DLAQSLGMPPGLSEGLK 196


>gb|AAM62959.1| unknown [Arabidopsis thaliana] gi|32892213|gb|AAP89016.1| complex
           interacting protein 9 [Arabidopsis thaliana]
          Length = 180

 Score =  227 bits (578), Expect = 3e-57
 Identities = 127/177 (71%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
 Frame = +3

Query: 48  STTAFTLQISPL---NARTTSLRGKLKPIGLSLTYPRVRYPRVYCLFGGKKDNNNEKSDD 218
           +T  F   +SP    NA   S R  +  +    +    R  RV  LFGG K +N E   D
Sbjct: 7   NTDFFKTLLSPFSNGNAAQRSSRQNIVWLNRKQSGNNNRSLRVNVLFGGGKKDNKE---D 63

Query: 219 GQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYCEGELIKVTLSGNQQP 398
           GQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYC+GEL+KVTLSGNQQP
Sbjct: 64  GQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQP 123

Query: 399 IRTEITEAAMELGSEKLSLLVTEAYRDAHQKSVLAMKERMSNLAQSLGMPQGLEGLK 569
           IRT+IT+AAMELGSEKLSLLVTEAY+DAH KSVLAMKERMS+LAQSLGMP GL+GLK
Sbjct: 124 IRTDITDAAMELGSEKLSLLVTEAYKDAHSKSVLAMKERMSDLAQSLGMPPGLDGLK 180


>ref|NP_194791.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7269963|emb|CAB79780.1| putative protein [Arabidopsis
           thaliana] gi|18650641|gb|AAL75890.1| AT4g30620/F17I23_40
           [Arabidopsis thaliana] gi|56236132|gb|AAV84522.1|
           At4g30620 [Arabidopsis thaliana]
           gi|98960937|gb|ABF58952.1| At4g30620 [Arabidopsis
           thaliana] gi|332660387|gb|AEE85787.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 180

 Score =  226 bits (576), Expect = 5e-57
 Identities = 127/177 (71%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
 Frame = +3

Query: 48  STTAFTLQISPL---NARTTSLRGKLKPIGLSLTYPRVRYPRVYCLFGGKKDNNNEKSDD 218
           +T  F   +SP    NA   S R  +  +    +    R  RV  LFGG K +N E   D
Sbjct: 7   NTDFFKTLLSPFSNGNAAQRSSRQNIVWLNRKQSGNNNRSLRVNGLFGGGKKDNKE---D 63

Query: 219 GQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYCEGELIKVTLSGNQQP 398
           GQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYC+GEL+KVTLSGNQQP
Sbjct: 64  GQSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQP 123

Query: 399 IRTEITEAAMELGSEKLSLLVTEAYRDAHQKSVLAMKERMSNLAQSLGMPQGLEGLK 569
           IRT+IT+AAMELGSEKLSLLVTEAY+DAH KSVLAMKERMS+LAQSLGMP GL+GLK
Sbjct: 124 IRTDITDAAMELGSEKLSLLVTEAYKDAHSKSVLAMKERMSDLAQSLGMPPGLDGLK 180


Top