BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018131
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...   491   e-140
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...   443   e-127
ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communi...   458   e-126
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123
ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-l...   442   e-122

>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
            gi|302142303|emb|CBI19506.3| unnamed protein product
            [Vitis vinifera]
          Length = 448

 Score =  491 bits (1264), Expect(2) = e-140
 Identities = 240/372 (64%), Positives = 294/372 (79%)
 Frame = -1

Query: 1118 SGSILYWSWNKLHAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWH 939
            SGSI YWSW+K   EV+SFPAEPI PL +NREGTYI GGG  GDIY+W+VASGRLL KWH
Sbjct: 63   SGSIFYWSWSKPQVEVKSFPAEPIKPLAANREGTYIAGGGLSGDIYFWEVASGRLLKKWH 122

Query: 938  AHYRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVT 759
            AHYRAVTCLV SDDESLLISG+EDG VRVWSL+ +F+ +  ++A   YEHSFSEHTLRVT
Sbjct: 123  AHYRAVTCLVFSDDESLLISGAEDGCVRVWSLFMIFDDLRREEAGHLYEHSFSEHTLRVT 182

Query: 758  DVVCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRD 579
            D+V G GG +AI++SASEDRTCKVW +S GRLLR V FPSIIDAIALDPGE  F+AGSRD
Sbjct: 183  DIVTGYGGGNAIIVSASEDRTCKVWSLSTGRLLRNVVFPSIIDAIALDPGEHVFYAGSRD 242

Query: 578  GKIYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTK 399
            GKIYIAAL+   +SS+S+GMHIIG+LS+HSKAV+CLA   DG LLVSG  DG +RVWDTK
Sbjct: 243  GKIYIAALNAVGSSSNSYGMHIIGSLSDHSKAVTCLAFATDGILLVSGSEDGMVRVWDTK 302

Query: 398  TLQIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQASRRHGSSLPPPLDKYTNSKDDDI 219
            T  I R+ KH+KGPV+N+LV+RR    NP+   ++ +S++HGS L PPLDKY NS D++ 
Sbjct: 303  TRNIFRIFKHAKGPVSNILVVRRPNDSNPRN--SQTSSKKHGSFLSPPLDKYLNSSDENE 360

Query: 218  DVNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLEM 39
            D    I   +  +++ D   Y + H++   IKE QQQGSSAA+EMEM RL++DS++S++M
Sbjct: 361  DAKVFIGCQTTFSKSVDAS-YRSCHIIIDQIKELQQQGSSAATEMEMERLKIDSQKSVQM 419

Query: 38   THQWMKMYEDLH 3
              QW KMYE+LH
Sbjct: 420  VQQWKKMYENLH 431



 Score = 34.3 bits (77), Expect(2) = e-140
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = -2

Query: 1195 SPSDGLLSIGGRFLGSSQLRDSSASS 1118
            SP  GL+ +  RF  SSQLRDSS+SS
Sbjct: 36   SPPHGLVCVADRFFASSQLRDSSSSS 61


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score =  443 bits (1139), Expect(2) = e-127
 Identities = 214/373 (57%), Positives = 280/373 (75%), Gaps = 1/373 (0%)
 Frame = -1

Query: 1118 SGSILYWSWNKLHAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIYYWDVASGRLLNKWH 939
            +G +LYWSW+K   EV+SFPAE I P+ +N  GTYI GG   GDIY W+V +GRLL KW 
Sbjct: 58   TGYVLYWSWSKPQVEVKSFPAEQIKPIAANHPGTYIAGGAPSGDIYLWEVETGRLLKKWR 117

Query: 938  AHYRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQPYEHSFSEHTLRVT 759
            AH+RAV+CLV S+D+SLL+SGSEDGSVRVWSL+ +F+ +  Q+A   YE+SFSEHTL VT
Sbjct: 118  AHFRAVSCLVFSEDDSLLVSGSEDGSVRVWSLFMIFDDLRCQQASNLYEYSFSEHTLTVT 177

Query: 758  DVVCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIALDPGEKSFFAGSRD 579
            DVV G+GGC+AI++SAS DRTCKVW +S G LLR + FPSII+ IALDP E  F+AGS D
Sbjct: 178  DVVIGNGGCNAIIVSASNDRTCKVWSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSED 237

Query: 578  GKIYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLVSGLVDGTIRVWDTK 399
            GKI+IAAL+ E  +++++GMHIIG+ S HS  V+CLA     NLL++G  DG +RVW+ +
Sbjct: 238  GKIFIAALNTESITTNNYGMHIIGSFSNHSNQVTCLAYGTSENLLITGSEDGMVRVWNAR 297

Query: 398  TLQIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSSLPPPLDKYTNSKDDD 222
            T  IVRM KH+KGPVNN+LV+RR    +   ++N QA SR+ GS+LPPPL+KY NS DDD
Sbjct: 298  TRNIVRMFKHAKGPVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDD 357

Query: 221  IDVNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEMEMARLRLDSKRSLE 42
            +D+  +ISL            Y +SHV+S++IKE Q QGS+AASEMEM +L+ D ++S++
Sbjct: 358  LDMKTMISLGGGRRSVDPS--YLSSHVISNYIKELQHQGSAAASEMEMEKLKHDYQKSVQ 415

Query: 41   MTHQWMKMYEDLH 3
            M +Q  KM E+LH
Sbjct: 416  MANQLKKMNENLH 428



 Score = 39.3 bits (90), Expect(2) = e-127
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = -2

Query: 1198 TSPSDGLLSIGGRFLGSSQLRDSSASS 1118
            TSPS GL+S+G RF+ SSQLRD  A++
Sbjct: 32   TSPSHGLISVGARFIASSQLRDDPAAT 58


>ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communis]
            gi|223550902|gb|EEF52388.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 452

 Score =  458 bits (1178), Expect = e-126
 Identities = 226/388 (58%), Positives = 291/388 (75%), Gaps = 3/388 (0%)
 Frame = -1

Query: 1157 SRFISAS*L--FRFFSGSILYWSWNKLHAEVRSFPAEPISPLVSNREGTYIIGGGSRGDI 984
            SRF++AS L      SGSI+YWSW+K   EV+ FP EPI PLV+N+EGTYIIGGG  G I
Sbjct: 45   SRFLAASQLRDSHASSGSIVYWSWSKPQVEVKCFPEEPIKPLVANKEGTYIIGGGISGHI 104

Query: 983  YYWDVASGRLLNKWHAHYRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAK 804
            Y W+VA+GRLL KW AHYRAVTCLV ++D+S L+SGSEDGSVRVWSL  +F+  + ++A 
Sbjct: 105  YIWEVATGRLLKKWRAHYRAVTCLVFTEDDSFLVSGSEDGSVRVWSLLMMFDEYQTEQAS 164

Query: 803  QPYEHSFSEHTLRVTDVVCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAI 624
            Q YEHSFSEHTLRVTDVV G GG + I++SAS+DRTCKVW +S+G LLR + FPSIID++
Sbjct: 165  QLYEHSFSEHTLRVTDVVTGYGGGNTIIVSASDDRTCKVWSLSKGNLLRNIVFPSIIDSL 224

Query: 623  ALDPGEKSFFAGSRDGKIYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLL 444
            ALDPGE  F+AG RDG IYIAAL+ + +S+ S  +HIIG+LS HSK V+CLA + +GNLL
Sbjct: 225  ALDPGENVFYAGCRDGNIYIAALNADSSSTKSHWLHIIGSLSSHSKPVTCLAYSANGNLL 284

Query: 443  VSGLVDGTIRVWDTKTLQIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSS 267
            ++G  DG IRVWD ++  IVR  KH+KGPVNN+ +++R    NP+ ++  QA SRRHGSS
Sbjct: 285  LAGSEDGIIRVWDPRSHNIVRTFKHAKGPVNNIQIVKRPHYLNPRASSIVQASSRRHGSS 344

Query: 266  LPPPLDKYTNSKDDDIDVNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASE 87
            LPPPLDKY NS D  I    ++ L   C    D   Y +  V+++ IKE QQQGS+AA+E
Sbjct: 345  LPPPLDKYVNSTDKSIGSTAVVRLQDTCNNPLDVS-YVSYQVIANQIKELQQQGSAAAAE 403

Query: 86   MEMARLRLDSKRSLEMTHQWMKMYEDLH 3
            ME+ RL+LD  + ++M  +W KMY++LH
Sbjct: 404  MEVERLKLDCAQYMQMLQKWKKMYDNLH 431


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/387 (57%), Positives = 293/387 (75%), Gaps = 3/387 (0%)
 Frame = -1

Query: 1154 RFISAS*LF--RFFSGSILYWSWNKLHAEVRSFPAEPISPLVSNREGTYIIGGGSRGDIY 981
            RF+++S L   +  SG+ILYWSW++   EV+ FP EPI PLV+N EGTY++GGG  G+IY
Sbjct: 45   RFLASSQLQDPKASSGAILYWSWSRPQVEVKCFPEEPIKPLVANSEGTYLVGGGLSGNIY 104

Query: 980  YWDVASGRLLNKWHAHYRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAKQ 801
            +W+VA+GRLL KW AHYRAVTCLV ++D+SLL+SGSEDGSVRVW L  +F+  ++++A Q
Sbjct: 105  FWEVATGRLLKKWRAHYRAVTCLVFTEDDSLLVSGSEDGSVRVWPLLMIFDDYQMEQASQ 164

Query: 800  PYEHSFSEHTLRVTDVVCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAIA 621
             YEHSF EHTLRVTD+V G GG +AI+ISASEDRTCKVW +S+G LLR + FPSIID+I 
Sbjct: 165  LYEHSFQEHTLRVTDIVTGYGGGNAIIISASEDRTCKVWSLSKGILLRNIVFPSIIDSIT 224

Query: 620  LDPGEKSFFAGSRDGKIYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLLV 441
            LDPGE  F+AG RDGKI+IAAL  + +S  S  +HIIG+LS HSK V+CLA + +GN+L+
Sbjct: 225  LDPGEHVFYAGGRDGKIHIAALGADSSSIKSHWLHIIGSLSSHSKNVTCLAYSTNGNVLL 284

Query: 440  SGLVDGTIRVWDTKTLQIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSSL 264
            SG  DG IRVWD KT  IVR+ KH+KGPVNN+ V+ R    NP++ +N QA SRRHG SL
Sbjct: 285  SGSEDGMIRVWDPKTHNIVRVFKHAKGPVNNIHVLNRPAYLNPRSLSNVQASSRRHGLSL 344

Query: 263  PPPLDKYTNSKDDDIDVNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASEM 84
            PPPL KY N+ D+ + ++  ++L + C    D     +S V++  IKE QQQGS+AA+EM
Sbjct: 345  PPPLSKYINTMDEKV-ISAAVNLQATCNNPLDASC-ISSQVINCQIKELQQQGSAAAAEM 402

Query: 83   EMARLRLDSKRSLEMTHQWMKMYEDLH 3
            E+ +L+LD  +S++M  +W K Y++LH
Sbjct: 403  EVEKLKLDCTQSMQMLQRWKKTYDNLH 429


>ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score =  442 bits (1137), Expect = e-122
 Identities = 221/388 (56%), Positives = 287/388 (73%), Gaps = 3/388 (0%)
 Frame = -1

Query: 1157 SRFISAS*LFRFFS--GSILYWSWNKLHAEVRSFPAEPISPLVSNREGTYIIGGGSRGDI 984
            +RFI++S L    S  GS+L+WSW+K   EV+SFPAE I PL +N  GT+I  G   GDI
Sbjct: 43   ARFIASSQLREDQSAPGSVLFWSWSKPQVEVKSFPAEQIKPLATNHPGTFIAAGAPSGDI 102

Query: 983  YYWDVASGRLLNKWHAHYRAVTCLVLSDDESLLISGSEDGSVRVWSLYKLFNVIEIQKAK 804
            Y W+V +GRLL KWHAH+RAV+CLV S+D+SLL+SGSEDGSVRVWSL+ +F+ +  Q+A 
Sbjct: 103  YLWEVETGRLLKKWHAHFRAVSCLVFSEDDSLLVSGSEDGSVRVWSLFMIFDDLRNQQAS 162

Query: 803  QPYEHSFSEHTLRVTDVVCGSGGCSAIVISASEDRTCKVWGISEGRLLRTVEFPSIIDAI 624
              YE+SFSEHTL VTDVV G+GGC+AI++SAS+DRTCKVW +S G LLR + FPSII+ I
Sbjct: 163  SLYEYSFSEHTLTVTDVVIGNGGCNAIIVSASKDRTCKVWSLSRGMLLRNIVFPSIINCI 222

Query: 623  ALDPGEKSFFAGSRDGKIYIAALDGERTSSSSFGMHIIGALSEHSKAVSCLALNMDGNLL 444
            ALDP E  F+AGS DGKI+IAAL+ E  +++++GMHII + S HS  V+CLA     NLL
Sbjct: 223  ALDPAEHVFYAGSEDGKIFIAALNTESIATNNYGMHIISSFSNHSNQVTCLAYGSSENLL 282

Query: 443  VSGLVDGTIRVWDTKTLQIVRMLKHSKGPVNNVLVIRRSLSKNPQTAANRQA-SRRHGSS 267
            +SG  DG +RVW+ +T  IVRM KHSKGPVNN+LV+RR    +   ++N QA SR+ GS+
Sbjct: 283  ISGSEDGMVRVWNARTRNIVRMFKHSKGPVNNILVVRRENDSSNHISSNVQASSRKQGSN 342

Query: 266  LPPPLDKYTNSKDDDIDVNPIISLPSHCTETPDGRLYYTSHVMSSHIKEFQQQGSSAASE 87
            LPPPL+KY NS DDD D+  +ISL            Y +SHV+S++IKE Q QGS+AASE
Sbjct: 343  LPPPLEKYANSIDDDSDMKTMISLGGGRKSVDPS--YISSHVISNYIKELQHQGSAAASE 400

Query: 86   MEMARLRLDSKRSLEMTHQWMKMYEDLH 3
            MEM +L+ D ++S++M +Q  KM E LH
Sbjct: 401  MEMEKLKHDYQKSVQMANQLKKMNEKLH 428