BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018130
         (1753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   569   e-160
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   509   e-142
ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   503   e-140
ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis ...   503   e-140
ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arab...   501   e-139

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
            gi|296084279|emb|CBI24667.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  569 bits (1467), Expect = e-160
 Identities = 300/441 (68%), Positives = 344/441 (78%), Gaps = 1/441 (0%)
 Frame = +2

Query: 194  MACLRTLYPHIH-CWTSLQCFRGTMPTTQAVRCNMVYNQLRKRFFTCPSSILFRKNFSEV 370
            MAC R+ + HI   W +L C+R +   TQ +  N     L++R      SIL RK    +
Sbjct: 1    MACYRSSHHHIRFLWGNLNCWRSSFSRTQKIGNNSCC--LQRRNLIHSPSILSRKGCCTL 58

Query: 371  SYGLNXXXXXXXXXXXXQCTTGISSEVEGVILQDKVVDLAQCEVKDANPNASNGRVMLID 550
            S  L+              TT ISS+ E  + Q   VD    + +  + ++SNGRVMLID
Sbjct: 59   SNSLDSSIHEVAHTISYGNTT-ISSKSERKLCQGAFVDSVDHKERKMDISSSNGRVMLID 117

Query: 551  GTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPSHAAVVFDHDG 730
            GTSIIYRAYYKLL+KLHHGYL  ADGNGDWVLTIF ALSL+ DVL+F PSH AVVFDH+G
Sbjct: 118  GTSIIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFAALSLIVDVLDFIPSHVAVVFDHNG 177

Query: 731  VPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKASIKAMSVKVIE 910
            +PFG T + S  S  AKGLNFRHTLYP YKS R PTPDT+VQGLQYLKASIKAMS+KVIE
Sbjct: 178  IPFGHTSISSKESIMAKGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIE 237

Query: 911  VPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRGSDMVSFGLED 1090
            VPGVEADDVIGTL+  SV  G+KVRVVSPDKDFFQILSPSLRLLRIA RG +M SFG+ED
Sbjct: 238  VPGVEADDVIGTLSVRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGMED 297

Query: 1091 FAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVENLLQCVDQVEE 1270
            FA RYG LEP+QFVD+I+L GDK+DNIPGVEGIG+VHA++LITKFGT+ENLLQCVDQV+E
Sbjct: 298  FAKRYGNLEPSQFVDVISLVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLLQCVDQVQE 357

Query: 1271 ERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKPEDDGEKFTSLLRAISA 1450
            ERIRKALI+ ADQA+LSKNLA+LR DLPFYMVPFTT DL+F KPED+GEKFTSLL AISA
Sbjct: 358  ERIRKALISGADQAVLSKNLALLRCDLPFYMVPFTTEDLIFTKPEDNGEKFTSLLNAISA 417

Query: 1451 YAEGYSADRIIRRASTLWKKL 1513
            YAEG+SAD IIRRA  LWKKL
Sbjct: 418  YAEGFSADPIIRRAFYLWKKL 438


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  509 bits (1311), Expect = e-142
 Identities = 255/332 (76%), Positives = 292/332 (87%)
 Frame = +2

Query: 518  NASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAP 697
            N ++ RVMLIDGTSII+RAYYKLL+KLHHG+L  ADGNGDWVLTIFTALSL+ DVLE  P
Sbjct: 127  NPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLEIMP 186

Query: 698  SHAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKA 877
            SH AVVFDHDG P+G T + S  ++ +KG  FRHT+YP YKS R PTPDTVVQGLQYLKA
Sbjct: 187  SHVAVVFDHDGHPYGHTYISSNENFMSKGSTFRHTIYPAYKSNRAPTPDTVVQGLQYLKA 246

Query: 878  SIKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASR 1057
            SIK+MS+KVIEVPGVEADDVIGTLA  SVA G KVRVVSPDKDFFQILSPSLRLLRIASR
Sbjct: 247  SIKSMSIKVIEVPGVEADDVIGTLALRSVAVGCKVRVVSPDKDFFQILSPSLRLLRIASR 306

Query: 1058 GSDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVE 1237
            G +MVSFGLEDFA ++G LEP+QFVD+++L GDK+DNIPGV+GIG+V+A++LIT+FGT+E
Sbjct: 307  GIEMVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFGTLE 366

Query: 1238 NLLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKPEDDGE 1417
            NLLQ VDQVE+ERI+K L+ NA+QAILSK+LA LRSDLPFYMVPFTT DL+FKKPED+GE
Sbjct: 367  NLLQHVDQVEDERIKKMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGE 426

Query: 1418 KFTSLLRAISAYAEGYSADRIIRRASTLWKKL 1513
            KFTSLL AI AYAE +SAD IIRR   LWKKL
Sbjct: 427  KFTSLLTAIGAYAERFSADPIIRRVLYLWKKL 458


>ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
            gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
            thaliana] gi|332645358|gb|AEE78879.1| 5'-3'
            exonuclease-like protein [Arabidopsis thaliana]
            gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 425

 Score =  503 bits (1295), Expect = e-140
 Identities = 247/331 (74%), Positives = 292/331 (88%)
 Frame = +2

Query: 521  ASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPS 700
            +SNGRVMLIDGTSIIYRAYYKLL++L+HG+L  ADGN DWVLTIF++LSL+ DVL+F PS
Sbjct: 91   SSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPS 150

Query: 701  HAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKAS 880
            H AVVFDHDGVP+G T   STG   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKAS
Sbjct: 151  HVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKAS 210

Query: 881  IKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRG 1060
            IKAMS+KVIEVPGVEADDVIGTLA  S++ GFKVRVVSPDKDFFQILSPSLRLLR+  RG
Sbjct: 211  IKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRG 270

Query: 1061 SDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVEN 1240
            S+M SFG+EDFA ++G LEP QFVD+IAL GDK+DNIPGV+GIG+VHA++LI++FGT+EN
Sbjct: 271  SEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLEN 330

Query: 1241 LLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKPEDDGEK 1420
            LLQ VD+++E +I+++LIA+ADQAILSK LA+LRSDLP Y+VPF T DL FKKPED+GEK
Sbjct: 331  LLQSVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEK 390

Query: 1421 FTSLLRAISAYAEGYSADRIIRRASTLWKKL 1513
             +SLL AI+ YAEG+SAD +IRRA  LW+KL
Sbjct: 391  LSSLLIAIADYAEGFSADPVIRRAFRLWEKL 421


>ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 448

 Score =  503 bits (1295), Expect = e-140
 Identities = 247/331 (74%), Positives = 292/331 (88%)
 Frame = +2

Query: 521  ASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPS 700
            +SNGRVMLIDGTSIIYRAYYKLL++L+HG+L  ADGN DWVLTIF++LSL+ DVL+F PS
Sbjct: 114  SSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPS 173

Query: 701  HAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKAS 880
            H AVVFDHDGVP+G T   STG   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKAS
Sbjct: 174  HVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKAS 233

Query: 881  IKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRG 1060
            IKAMS+KVIEVPGVEADDVIGTLA  S++ GFKVRVVSPDKDFFQILSPSLRLLR+  RG
Sbjct: 234  IKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRG 293

Query: 1061 SDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVEN 1240
            S+M SFG+EDFA ++G LEP QFVD+IAL GDK+DNIPGV+GIG+VHA++LI++FGT+EN
Sbjct: 294  SEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLEN 353

Query: 1241 LLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKPEDDGEK 1420
            LLQ VD+++E +I+++LIA+ADQAILSK LA+LRSDLP Y+VPF T DL FKKPED+GEK
Sbjct: 354  LLQSVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEK 413

Query: 1421 FTSLLRAISAYAEGYSADRIIRRASTLWKKL 1513
             +SLL AI+ YAEG+SAD +IRRA  LW+KL
Sbjct: 414  LSSLLIAIADYAEGFSADPVIRRAFRLWEKL 444


>ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
            lyrata] gi|297321959|gb|EFH52380.1| hypothetical protein
            ARALYDRAFT_485561 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  501 bits (1291), Expect = e-139
 Identities = 246/331 (74%), Positives = 292/331 (88%)
 Frame = +2

Query: 521  ASNGRVMLIDGTSIIYRAYYKLLSKLHHGYLPDADGNGDWVLTIFTALSLVFDVLEFAPS 700
            +SNGRVMLIDGTSIIYRAYYKLL++L+HG+L  ADGN DWVLTIF++LSL+ DVL+F PS
Sbjct: 120  SSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPS 179

Query: 701  HAAVVFDHDGVPFGCTPVPSTGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKAS 880
            H AVVFDHDGVP+G T   STG   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKAS
Sbjct: 180  HVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKAS 239

Query: 881  IKAMSVKVIEVPGVEADDVIGTLAASSVADGFKVRVVSPDKDFFQILSPSLRLLRIASRG 1060
            IKAMS+KVIEVPGVEADDVIGTLA  S++ GFKVRVVSPDKDFFQILSPSLRLLR+  RG
Sbjct: 240  IKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRG 299

Query: 1061 SDMVSFGLEDFAGRYGTLEPTQFVDMIALTGDKADNIPGVEGIGDVHALKLITKFGTVEN 1240
            S+M SFG+EDFA ++G LEP QFVD+IAL GDK+DNIPGV+GIG+VHA++LI++FG++EN
Sbjct: 300  SEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGSLEN 359

Query: 1241 LLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKPEDDGEK 1420
            LLQ VD+++E +I+++LIA+ADQAILSK LA+LRSDLP Y+VPF T DL FKKPED+GEK
Sbjct: 360  LLQSVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEK 419

Query: 1421 FTSLLRAISAYAEGYSADRIIRRASTLWKKL 1513
             +SLL AI+ YAEG+SAD +IRRA  LW+KL
Sbjct: 420  LSSLLIAIADYAEGFSADPVIRRAYRLWEKL 450