BLASTX nr result

ID: Coptis25_contig00018107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018107
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]   107   1e-21
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002870268.1| hypothetical protein ARALYDRAFT_915332 [Arab...    94   1e-17
ref|NP_193233.5| fanconi anemia group D2 protein [Arabidopsis th...    89   5e-16
gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indi...    87   1e-15

>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/71 (66%), Positives = 62/71 (87%)
 Frame = +2

Query: 5   SQKTNCEESLELLRMSLDSCKSCPLPLIMFYDELIALLERKRLQPAIIDWIGRHVGDFES 184
           SQ+ N  E+LELL+ SLDSCK  P+PLI+FYDEL+ +L+ + +QPAI+DWIG+HVG+FES
Sbjct: 479 SQQANSAEALELLKTSLDSCKQFPIPLILFYDELVTMLDCRTVQPAIVDWIGKHVGEFES 538

Query: 185 IFLSDLEGGKL 217
           +FLSDLEGG+L
Sbjct: 539 MFLSDLEGGQL 549


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
           predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/71 (64%), Positives = 60/71 (84%)
 Frame = +2

Query: 5   SQKTNCEESLELLRMSLDSCKSCPLPLIMFYDELIALLERKRLQPAIIDWIGRHVGDFES 184
           SQK+NCEE+LELLR SLDSCK   LPL++FYDEL  ++  K+LQP I++W+G+H G+FES
Sbjct: 606 SQKSNCEEALELLRTSLDSCKQLCLPLVLFYDELTTIMLHKKLQPEIVEWVGKHAGEFES 665

Query: 185 IFLSDLEGGKL 217
            FLSDL+GG+L
Sbjct: 666 KFLSDLQGGQL 676


>ref|XP_002870268.1| hypothetical protein ARALYDRAFT_915332 [Arabidopsis lyrata subsp.
           lyrata] gi|297316104|gb|EFH46527.1| hypothetical protein
           ARALYDRAFT_915332 [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 42/72 (58%), Positives = 57/72 (79%)
 Frame = +2

Query: 2   SSQKTNCEESLELLRMSLDSCKSCPLPLIMFYDELIALLERKRLQPAIIDWIGRHVGDFE 181
           SSQ ++C E LELL+ S+DSC+   L LIMFYDE   +L +K LQP I++WIG+H+G+FE
Sbjct: 542 SSQVSDCGEILELLKTSVDSCRQSNLALIMFYDEFATILSQKLLQPEIMEWIGKHLGEFE 601

Query: 182 SIFLSDLEGGKL 217
           S+FL+DLE GK+
Sbjct: 602 SLFLADLENGKM 613


>ref|NP_193233.5| fanconi anemia group D2 protein [Arabidopsis thaliana]
           gi|332658132|gb|AEE83532.1| fanconi anemia group D2
           protein [Arabidopsis thaliana]
          Length = 1489

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = +2

Query: 2   SSQKTNCEESLELLRMSLDSCKSCPLPLIMFYDELIALLERKRLQPAIIDWIGRHVGDFE 181
           SSQ ++C E LELL+ S++SC+   L LIMFYDE   +L  K LQP I++WIG+H+G+FE
Sbjct: 583 SSQVSDCGEILELLKTSVESCRQSNLALIMFYDEFATILSHKLLQPEIMEWIGKHLGEFE 642

Query: 182 SIFLSDLEGGKL 217
           S+FL+DLE  K+
Sbjct: 643 SLFLADLENEKM 654


>gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indica Group]
           gi|222636453|gb|EEE66585.1| hypothetical protein
           OsJ_23134 [Oryza sativa Japonica Group]
          Length = 1489

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/72 (52%), Positives = 56/72 (77%)
 Frame = +2

Query: 2   SSQKTNCEESLELLRMSLDSCKSCPLPLIMFYDELIALLERKRLQPAIIDWIGRHVGDFE 181
           SSQ+ N +E+LELL+M+++SCK   LPLI+ YDEL  LLE   L  AI++W+G HV +F+
Sbjct: 576 SSQQPNYDEALELLKMAVNSCKFVMLPLILLYDELAVLLENSSLHSAIVEWVGEHVAEFD 635

Query: 182 SIFLSDLEGGKL 217
           ++FL+DL+ G+L
Sbjct: 636 TVFLADLDDGEL 647


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