BLASTX nr result

ID: Coptis25_contig00018088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018088
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526507.1| malic enzyme, putative [Ricinus communis] gi...   116   2e-24
ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   111   7e-23
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_004157695.1| PREDICTED: NAD-dependent malic enzyme 1, mit...   107   1e-21

>ref|XP_002526507.1| malic enzyme, putative [Ricinus communis]
           gi|223534182|gb|EEF35898.1| malic enzyme, putative
           [Ricinus communis]
          Length = 626

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/95 (61%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   FSHQLRLTCSSLGK---RLRNQMSMFERRSFTSTEGSRPSIVHKRSIDILHDPWFNKGTA 173
           FS+Q+R + S + +   RL N   + + RSFT+TEG RP+IVHKRS+DILHDPWFNKGTA
Sbjct: 4   FSNQIRASASLIKRLKDRLANPALLNQSRSFTTTEGHRPTIVHKRSLDILHDPWFNKGTA 63

Query: 174 FSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 278
           FSMTE          PPN+MSS+QQIERFM DLKR
Sbjct: 64  FSMTERDRLDLRGLLPPNIMSSEQQIERFMADLKR 98


>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/97 (63%), Positives = 73/97 (75%), Gaps = 5/97 (5%)
 Frame = +3

Query: 3   FSHQLRLTCSSLGKRLRNQMS-----MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNKG 167
           FS+Q+R + SSL KRL+ +M+     M   RSFT+ EG RP+IVHKRS+DILHDPWFNKG
Sbjct: 4   FSNQIRAS-SSLIKRLQQRMTNPAALMQATRSFTTLEGHRPTIVHKRSLDILHDPWFNKG 62

Query: 168 TAFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 278
           TAFSMTE          PPNVMSS+QQI+RFMVDLKR
Sbjct: 63  TAFSMTERDRLDIRGLLPPNVMSSEQQIQRFMVDLKR 99


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
           protein product [Vitis vinifera]
          Length = 625

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
 Frame = +3

Query: 3   FSHQLRLTCSSLGKRLRNQMS---MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNKGTA 173
           F  Q++L  SSL +RL+++ S   +  RRSFT+TEG RPS+VHKRS+DILHDPWFNKGTA
Sbjct: 4   FCRQIKLP-SSLIRRLKHRSSNSMLSGRRSFTTTEGHRPSLVHKRSLDILHDPWFNKGTA 62

Query: 174 FSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 278
           FSMTE          PP VMS + QIERFMVDLKR
Sbjct: 63  FSMTERDRLDLRGLLPPTVMSPEMQIERFMVDLKR 97


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  108 bits (271), Expect = 3e-22
 Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 5/97 (5%)
 Frame = +3

Query: 3   FSHQLRLTCSSLGKRLRNQMS-----MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNKG 167
           FS+Q+R + SSL KRL+ +M+     M   R FT+ EG RP+IVHKRS+DILHDPWFNKG
Sbjct: 4   FSNQIRAS-SSLIKRLKQRMTNPAALMQATRHFTTLEGHRPTIVHKRSLDILHDPWFNKG 62

Query: 168 TAFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 278
           TAFSMTE          PPNVM+S+QQI+RF  DLKR
Sbjct: 63  TAFSMTERDRLDLRGLLPPNVMTSEQQIQRFAADLKR 99


>ref|XP_004157695.1| PREDICTED: NAD-dependent malic enzyme 1, mitochondrial-like
           [Cucumis sativus]
          Length = 350

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 7/90 (7%)
 Frame = +3

Query: 30  SSLGKRLRNQMSMF-------ERRSFTSTEGSRPSIVHKRSIDILHDPWFNKGTAFSMTE 188
           +SL KRL+    M        + RSFT++EG RP+IVHKRS+DILHDPWFNKGTAF++TE
Sbjct: 9   ASLMKRLKLHYQMINGIPALAQARSFTTSEGHRPTIVHKRSLDILHDPWFNKGTAFTITE 68

Query: 189 XXXXXXXXXXPPNVMSSQQQIERFMVDLKR 278
                     PPNVMSS+QQIERFMVDLKR
Sbjct: 69  RDRLDLRGLLPPNVMSSEQQIERFMVDLKR 98


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