BLASTX nr result

ID: Coptis25_contig00018087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018087
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526725.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_003559733.1| PREDICTED: uncharacterized protein LOC100833...    69   4e-10
ref|XP_003579363.1| PREDICTED: uncharacterized protein LOC100823...    68   9e-10
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002271799.2| PREDICTED: uncharacterized protein LOC100246...    65   6e-09

>ref|XP_002526725.1| conserved hypothetical protein [Ricinus communis]
           gi|223533914|gb|EEF35639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/76 (40%), Positives = 54/76 (71%)
 Frame = -2

Query: 272 AKNPVILTLSLEKRIIPRCNVLEILYSNGLIGRVNAGSVTTALKLKEEKFIEKYVTKYQV 93
           AK+P++++LSLEKR+IPRC+V+++L S GL   V   S+ T+L++ EE F+ K+V  Y+ 
Sbjct: 363 AKHPLLISLSLEKRVIPRCSVIQVLLSKGL---VRLTSLATSLRISEELFLHKFVRPYKE 419

Query: 92  AVPEMVHTYKRQIGLA 45
             P ++  Y+ ++ +A
Sbjct: 420 EAPHLLKLYQEELNIA 435


>ref|XP_003559733.1| PREDICTED: uncharacterized protein LOC100833632 [Brachypodium
           distachyon]
          Length = 390

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/67 (49%), Positives = 49/67 (73%)
 Frame = -2

Query: 266 NPVILTLSLEKRIIPRCNVLEILYSNGLIGRVNAGSVTTALKLKEEKFIEKYVTKYQVAV 87
           +P+IL+LS EKR++PRC VL+IL S G+I R+      + L L E+KF+EKYV+ YQ A+
Sbjct: 317 SPMILSLSYEKRLVPRCEVLDILVSKGVIRRIR----MSHLMLGEKKFMEKYVSNYQEAI 372

Query: 86  PEMVHTY 66
           P+++  Y
Sbjct: 373 PQVLEAY 379


>ref|XP_003579363.1| PREDICTED: uncharacterized protein LOC100823526 [Brachypodium
           distachyon]
          Length = 384

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -2

Query: 266 NPVILTLSLEKRIIPRCNVLEILYSNGL-IGRVNAGSVTTALKLKEEKFIEKYVTKYQVA 90
           NPV+LTLS++KR+ PRC  +E L S G+ IG  N   + T ++L E++F++KY+ KY   
Sbjct: 306 NPVLLTLSIDKRMAPRCRAVEALRSKGIDIGNSN---MVTIVRLTEDRFVKKYILKYAEK 362

Query: 89  VPEMVHTYKRQIGLADL 39
           VPE++  Y R  G A++
Sbjct: 363 VPEILELYPRVQGHAEI 379


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/70 (47%), Positives = 52/70 (74%)
 Frame = -2

Query: 263 PVILTLSLEKRIIPRCNVLEILYSNGLIGRVNAGSVTTALKLKEEKFIEKYVTKYQVAVP 84
           PVIL LSLEKRIIPRC V+++L+S GLI +    S+ T L   E++F+E++VTK++  VP
Sbjct: 328 PVILFLSLEKRIIPRCKVIQVLWSKGLIKK--DISLNTVLLPVEKRFLERFVTKFEEEVP 385

Query: 83  EMVHTYKRQI 54
           +++  Y+ ++
Sbjct: 386 QLLSVYEGKV 395


>ref|XP_002271799.2| PREDICTED: uncharacterized protein LOC100246295 [Vitis vinifera]
          Length = 387

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/81 (38%), Positives = 54/81 (66%)
 Frame = -2

Query: 272 AKNPVILTLSLEKRIIPRCNVLEILYSNGLIGRVNAGSVTTALKLKEEKFIEKYVTKYQV 93
           +++PV + L+ EKR++PRC+V+++L   GL+ +    S  T LKL E  F++KYV K+Q 
Sbjct: 308 SRDPVAICLNFEKRVVPRCSVVKVLLLKGLVKKDMRSS--TFLKLTERDFLDKYVIKHQD 365

Query: 92  AVPEMVHTYKRQIGLADLKEG 30
            VP+++  Y+ ++  A+L  G
Sbjct: 366 NVPQLLDLYQGKVSFAELGFG 386


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