BLASTX nr result

ID: Coptis25_contig00018078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018078
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298822.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_002529445.1| esophageal cancer associated protein, putati...    60   8e-07
ref|XP_003590320.1| hypothetical protein MTR_1g056460 [Medicago ...    58   2e-06

>ref|XP_002298822.1| predicted protein [Populus trichocarpa] gi|222846080|gb|EEE83627.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 47/131 (35%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
 Frame = +1

Query: 484 INSAHLSQREREMELEFRVRDYEAEEAAHSLPRIPTHNNHPLLFIIPPSSTNYHNQV--- 654
           +    L  R+    +EFR RDY AEE  H L R  T ++HPLL    P S ++HNQV   
Sbjct: 3   LKDQRLRSRKSVFRMEFRRRDYSAEEQGHVLRRSRT-DHHPLL----PPSPSFHNQVVVE 57

Query: 655 --DSGSFYDPLRGGPTVSLQDYNTVYVEDTP------SDEQWLSFKRSIMQTLXXXXXXX 810
              +  F+DPLRG   V            T       S ++W SFKR +MQ         
Sbjct: 58  KNGNNDFFDPLRGLNAVDSTSAEEKAANTTTNNNSQVSSKEWTSFKRFLMQKFPVSKMIS 117

Query: 811 XXXXXDVIIKS 843
                DVIIKS
Sbjct: 118 IASMPDVIIKS 128


>ref|XP_002529445.1| esophageal cancer associated protein, putative [Ricinus communis]
           gi|223531061|gb|EEF32911.1| esophageal cancer associated
           protein, putative [Ricinus communis]
          Length = 925

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 46/138 (33%), Positives = 60/138 (43%), Gaps = 30/138 (21%)
 Frame = +1

Query: 526 LEFRVRDYEAEEAAHSLPRIPTHNNHPLLFIIPPSSTNYHNQV----------DSGSFYD 675
           +EFR RDY  E+  H+LPR    ++HPL  + P      HNQ+           +  F+D
Sbjct: 1   MEFRSRDYSTEQKVHALPRSRA-DHHPLSTLSPSP----HNQIVVVVANREDNKNNDFFD 55

Query: 676 PLRGGPTVSLQDYNTVYVEDTP--------------------SDEQWLSFKRSIMQTLXX 795
           PLRGG  V+    N    E+TP                    S ++W SFKR +MQ    
Sbjct: 56  PLRGGGDVNAAISN----ENTPDNVDNVTFVVNLSSEASTRTSSKEWNSFKRFLMQKFPV 111

Query: 796 XXXXXXXXXXDVIIKSGK 849
                     DVIIKSGK
Sbjct: 112 SKMISVSYMPDVIIKSGK 129


>ref|XP_003590320.1| hypothetical protein MTR_1g056460 [Medicago truncatula]
           gi|355479368|gb|AES60571.1| hypothetical protein
           MTR_1g056460 [Medicago truncatula]
          Length = 996

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
 Frame = +1

Query: 526 LEFRVRDYEAEEAAHSLPRIPTHNNHPLLFIIPPSSTNYHNQVDSGS--FYDPLRGGPTV 699
           +EFR RDY  E+ +H+LPR+   + HP L   PP     +  VD+G+  F+DPLRGG   
Sbjct: 1   MEFRSRDYRTEKESHALPRLRA-DAHP-LSPPPPLLQQVNVVVDAGNADFFDPLRGGINN 58

Query: 700 SL-----QDYNTVYVEDTPSDEQWLSFKRSIMQTLXXXXXXXXXXXXDVIIKSGK 849
                  +  N   V   P  ++W SF+R +MQ              DV+++SGK
Sbjct: 59  DAEANPPEPGNLNEVAGDPPMKEWTSFRRLLMQRFPVSKMVSLSSMPDVLMRSGK 113


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