BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018075
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis...   222   9e-56
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   221   2e-55
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   220   3e-55
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   216   6e-54

>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  224 bits (570), Expect = 3e-56
 Identities = 109/141 (77%), Positives = 123/141 (87%), Gaps = 4/141 (2%)
 Frame = +3

Query: 531 EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVR 710
           EVTKTALLHDCTLLCAWSLEECGRYLETIK+YENKPAD++QGQMDTDY SRL+HALT VR
Sbjct: 180 EVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVR 239

Query: 711 RVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAVTSQP-- 884
           RVNKTDVVTLGS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+R V+S P  
Sbjct: 240 RVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVV 299

Query: 885 --PPVEENPVINSLDDEKRAE 941
              PV+++   +S+D+    E
Sbjct: 300 PQTPVQKDTEPSSVDEVAEME 320



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = +1

Query: 322 QNRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYLLG 435
           Q+RNAILVSHRQKGNPLLKHIRNVKW FAD++CDYLLG
Sbjct: 92  QSRNAILVSHRQKGNPLLKHIRNVKWAFADVVCDYLLG 129


>ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
           gi|55976606|sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA
           excision repair protein ERCC-1; Short=AtERCC1;
           Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive
           7 gi|6729031|gb|AAF27027.1|AC009177_17 putative
           nucleotide repair protein [Arabidopsis thaliana]
           gi|9800490|gb|AAF99316.1|AF276082_1 ERCC1 [Arabidopsis
           thaliana] gi|15215614|gb|AAK91352.1| AT3g05210/T12H1_18
           [Arabidopsis thaliana] gi|21435979|gb|AAM51569.1|
           AT3g05210/T12H1_18 [Arabidopsis thaliana]
           gi|21618171|gb|AAM67221.1| putative nucleotide repair
           protein [Arabidopsis thaliana]
           gi|332640684|gb|AEE74205.1| DNA excision repair protein
           ERCC-1 [Arabidopsis thaliana]
          Length = 410

 Score =  222 bits (566), Expect = 9e-56
 Identities = 105/142 (73%), Positives = 123/142 (86%), Gaps = 4/142 (2%)
 Frame = +3

Query: 531 EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVR 710
           EVTKTALLHDCTLLCAWS+ EC RYLETIKVYENKPAD++QGQMDTDYLSRLNH+LT++R
Sbjct: 209 EVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIR 268

Query: 711 RVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAVTSQP-- 884
            VNK+DVVTLGS FGSL+ I+D+SMEDLARCPGIGE+KVKRLYDTFHEPF+RA +S P  
Sbjct: 269 HVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPFKRATSSYPSV 328

Query: 885 --PPVEENPVINSLDDEKRAEK 944
             PP+ E PV   ++ E+  E+
Sbjct: 329 VEPPIPEAPVEKDVNSEEPVEE 350



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +1

Query: 322 QNRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYLLG 435
           QNRNAILVSHRQKGNPLLKHIRNVKWVF+DII DY+LG
Sbjct: 121 QNRNAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLG 158


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  221 bits (563), Expect = 2e-55
 Identities = 111/139 (79%), Positives = 118/139 (84%)
 Frame = +3

Query: 531 EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVR 710
           EVT+TALLHDCTLLCAWSLEECGRYLETIKVYENK ADI+QGQ DTDYLSRL HALT VR
Sbjct: 191 EVTRTALLHDCTLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSRLTHALTTVR 250

Query: 711 RVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAVTSQPPP 890
            VNKTDVVTLGS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+R V S  P 
Sbjct: 251 HVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVPS-CPA 309

Query: 891 VEENPVINSLDDEKRAEKV 947
           V ENPV N+ +     E V
Sbjct: 310 VPENPVHNNAEPSSVNEVV 328



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = +1

Query: 322 QNRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYLLG 435
           Q+RNAILVSHRQKGNPLLKHIRNV+W FADI+CDYLLG
Sbjct: 103 QSRNAILVSHRQKGNPLLKHIRNVRWDFADIVCDYLLG 140


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  220 bits (561), Expect = 3e-55
 Identities = 103/118 (87%), Positives = 111/118 (94%)
 Frame = +3

Query: 531 EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVR 710
           EVTKTALLHDCTLLCAWSLEECGRYLETIK+YENKPAD++QGQMDTDYLSRL HALT +R
Sbjct: 186 EVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRLTHALTTIR 245

Query: 711 RVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAVTSQP 884
            VNKTDVVTLGS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+R V+S P
Sbjct: 246 HVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHP 303



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 31/36 (86%), Positives = 35/36 (97%)
 Frame = +1

Query: 328 RNAILVSHRQKGNPLLKHIRNVKWVFADIICDYLLG 435
           RN+ILVSHRQKGNPLLKHIRNV+W FAD++CDYLLG
Sbjct: 100 RNSILVSHRQKGNPLLKHIRNVRWAFADVVCDYLLG 135


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 412

 Score =  216 bits (550), Expect = 6e-54
 Identities = 103/125 (82%), Positives = 113/125 (90%)
 Frame = +3

Query: 531 EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVR 710
           EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPAD++QG MDTDYLSRL H LT+VR
Sbjct: 195 EVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGHMDTDYLSRLTHVLTSVR 254

Query: 711 RVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAVTSQPPP 890
            VNKTDVVTLG+ FGSLS IMD+SMEDLARCPGIGE+KV+RLYDTFHEPF+R V++  P 
Sbjct: 255 HVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTH-PA 313

Query: 891 VEENP 905
           V E P
Sbjct: 314 VPETP 318



 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +1

Query: 325 NRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYLLG 435
           +RNAILVS+RQKGNPLLKHIRN +W FAD++ DYLLG
Sbjct: 108 SRNAILVSNRQKGNPLLKHIRNARWAFADVVPDYLLG 144