BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018070
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135683.1| PREDICTED: AP-4 complex subunit sigma-like [...    79   5e-26
ref|XP_002308286.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-26
ref|NP_001236735.1| uncharacterized protein LOC100306047 [Glycin...    75   5e-26
ref|XP_002514188.1| AP-4 complex subunit sigma-1, putative [Rici...    76   2e-25
gb|AFK35630.1| unknown [Lotus japonicus]                               75   2e-25

>ref|XP_004135683.1| PREDICTED: AP-4 complex subunit sigma-like [Cucumis sativus]
           gi|449489825|ref|XP_004158427.1| PREDICTED: AP-4 complex
           subunit sigma-like [Cucumis sativus]
          Length = 143

 Score = 78.6 bits (192), Expect(2) = 5e-26
 Identities = 41/70 (58%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
 Frame = +1

Query: 337 LFFLVGIDNDE-----------------------CESDIMFHLEKVHFMLEEMIMNGCIV 447
           LFFLVG+DNDE                       CE DIMFHLEK HFMLEEM+MNGCIV
Sbjct: 66  LFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIV 125

Query: 448 EANKSNILSP 477
           E +KSNILSP
Sbjct: 126 ETSKSNILSP 135



 Score = 64.3 bits (155), Expect(2) = 5e-26
 Identities = 37/56 (66%), Positives = 40/56 (71%), Gaps = 13/56 (23%)
 Frame = +3

Query: 216 FILLVNKLD--------EYLTIEERRALEGEIVR-----NEQQCSFVEHRNYKIVF 344
           FIL+VNK          E LT+EERRALEGEIVR     NEQQCSFVEHRNYKIV+
Sbjct: 5   FILMVNKQGQTRLAQYYENLTLEERRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 60


>ref|XP_002308286.1| predicted protein [Populus trichocarpa] gi|222854262|gb|EEE91809.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 78.6 bits (192), Expect(2) = 5e-26
 Identities = 41/70 (58%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
 Frame = +1

Query: 337 LFFLVGIDNDE-----------------------CESDIMFHLEKVHFMLEEMIMNGCIV 447
           LFFLVG+DNDE                       CE DIMFHLEK HFMLEEM+MNGCIV
Sbjct: 66  LFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIV 125

Query: 448 EANKSNILSP 477
           E +KSNILSP
Sbjct: 126 ETSKSNILSP 135



 Score = 64.3 bits (155), Expect(2) = 5e-26
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 13/56 (23%)
 Frame = +3

Query: 216 FILLVNKLD--------EYLTIEERRALEGEIVR-----NEQQCSFVEHRNYKIVF 344
           FIL+VNK          E+LT+EERRALEGEIVR     N+QQCSFVEHRNYKI++
Sbjct: 5   FILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIIY 60


>ref|NP_001236735.1| uncharacterized protein LOC100306047 [Glycine max]
           gi|356494887|ref|XP_003516313.1| PREDICTED: AP-4 complex
           subunit sigma-like [Glycine max]
           gi|255627383|gb|ACU14036.1| unknown [Glycine max]
          Length = 143

 Score = 75.5 bits (184), Expect(2) = 5e-26
 Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
 Frame = +1

Query: 337 LFFLVGIDNDE-----------------------CESDIMFHLEKVHFMLEEMIMNGCIV 447
           LFFLVG+D+DE                       CE DIMFHLEK HFMLEEM+MNGCIV
Sbjct: 66  LFFLVGVDDDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIV 125

Query: 448 EANKSNILSP 477
           E +KSNIL+P
Sbjct: 126 ETSKSNILTP 135



 Score = 67.4 bits (163), Expect(2) = 5e-26
 Identities = 37/56 (66%), Positives = 41/56 (73%), Gaps = 13/56 (23%)
 Frame = +3

Query: 216 FILLVNKLD--------EYLTIEERRALEGEIVR-----NEQQCSFVEHRNYKIVF 344
           F+L+VNK          EYLT+EERRALEGEIVR     NEQQCSFVEHRNYKIV+
Sbjct: 5   FVLMVNKQGQTRLAQYYEYLTLEERRALEGEIVRKCLARNEQQCSFVEHRNYKIVY 60


>ref|XP_002514188.1| AP-4 complex subunit sigma-1, putative [Ricinus communis]
           gi|223546644|gb|EEF48142.1| AP-4 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 143

 Score = 76.3 bits (186), Expect(2) = 2e-25
 Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
 Frame = +1

Query: 337 LFFLVGIDNDE-----------------------CESDIMFHLEKVHFMLEEMIMNGCIV 447
           LFFLVG+DNDE                       CE DIMFHLEK HFMLEEM+MNGCIV
Sbjct: 66  LFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIV 125

Query: 448 EANKSNILSP 477
           E +K+NIL+P
Sbjct: 126 ETSKANILAP 135



 Score = 64.7 bits (156), Expect(2) = 2e-25
 Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 13/56 (23%)
 Frame = +3

Query: 216 FILLVNKLD--------EYLTIEERRALEGEIVR-----NEQQCSFVEHRNYKIVF 344
           FIL+VNK          E+LT+EERRALEGEIVR     N+QQCSFVEHRNYKIV+
Sbjct: 5   FILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVY 60


>gb|AFK35630.1| unknown [Lotus japonicus]
          Length = 143

 Score = 74.7 bits (182), Expect(2) = 2e-25
 Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 23/70 (32%)
 Frame = +1

Query: 337 LFFLVGIDNDE-----------------------CESDIMFHLEKVHFMLEEMIMNGCIV 447
           LFFLVG+D DE                       CE DIMFHLEKVHFMLEEM+MNGCIV
Sbjct: 66  LFFLVGVDADENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNGCIV 125

Query: 448 EANKSNILSP 477
           E +K+NIL+P
Sbjct: 126 ETSKANILAP 135



 Score = 66.2 bits (160), Expect(2) = 2e-25
 Identities = 37/56 (66%), Positives = 40/56 (71%), Gaps = 13/56 (23%)
 Frame = +3

Query: 216 FILLVNKLD--------EYLTIEERRALEGEIVR-----NEQQCSFVEHRNYKIVF 344
           F+L+VNK          EYLTIEERRALEGEIVR     NE QCSFVEHRNYKIV+
Sbjct: 5   FVLMVNKQGQTRLAQYYEYLTIEERRALEGEIVRKCLARNEHQCSFVEHRNYKIVY 60