BLASTX nr result

ID: Coptis25_contig00018067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018067
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32503.3| unnamed protein product [Vitis vinifera]              102   1e-19
ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_004164091.1| PREDICTED: B3 domain-containing transcriptio...   100   3e-19
ref|XP_004145348.1| PREDICTED: B3 domain-containing transcriptio...   100   3e-19
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...   100   3e-19

>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  102 bits (253), Expect = 1e-19
 Identities = 58/148 (39%), Positives = 82/148 (55%)
 Frame = +2

Query: 182 SSSCLHPTESVTRRSVSFREKERDILEATNFTSKNPFCWVIMRPSYVRGWLKLRLQTRFG 361
           +SS L  +E    R V+  EK+R +  A  F   NPFC VI+R SYV     L + +RF 
Sbjct: 212 NSSELTNSECKRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFA 271

Query: 362 KKYLKEGVQHLTLKVSDGRTWPVMCSTVNREYILMKGWENFVLDNHLKQDDICFFELVDK 541
           +KYL    + + L+ SDG+ W V C +      L KGW  FV DN+L++ D+C FEL++ 
Sbjct: 272 EKYLNGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINM 331

Query: 542 THKNLEVTIFRLCRDPNQYTRISAQSKN 625
               L+V+IFR+  D     R+  QS N
Sbjct: 332 EDVVLKVSIFRVLDD----ARVETQSSN 355


>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  100 bits (250), Expect = 3e-19
 Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
 Frame = +2

Query: 182 SSSCLHPTESVTRR--SVSFREKERDILEATNFTSKNPFCWVIMRPSYVRGWLKLRLQTR 355
           S+   + +E++TRR  +V+  EKER I  A  F S NPF  VI+RPSYV     L + + 
Sbjct: 176 STHVRNTSETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSS 235

Query: 356 FGKKYLKEGVQHLTLKVSDGRTWPVMCSTVNREYILMKGWENFVLDNHLKQDDICFFELV 535
           F + +L      +TL+VSDG+ WPV CS  + +  L +GW  FV +N+L++ D+C FEL+
Sbjct: 236 FARTFLNTVTGFVTLQVSDGKQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELI 295

Query: 536 DKTHKNLEVTIFRLCRD 586
                 L+V +FR+  D
Sbjct: 296 HAKEIVLKVAVFRVLED 312


>ref|XP_004164091.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Cucumis sativus]
          Length = 375

 Score =  100 bits (249), Expect = 3e-19
 Identities = 45/108 (41%), Positives = 68/108 (62%)
 Frame = +2

Query: 272 FTSKNPFCWVIMRPSYVRGWLKLRLQTRFGKKYLKEGVQHLTLKVSDGRTWPVMCSTVNR 451
           F   NPFCW++MR SY+R    L + ++F +KYLK     +TL+VS G+ W V C     
Sbjct: 267 FKFGNPFCWIVMRQSYIRRGFHLHIPSKFAEKYLKGVWGDITLQVSSGKQWRVRCIREGP 326

Query: 452 EYILMKGWENFVLDNHLKQDDICFFELVDKTHKNLEVTIFRLCRDPNQ 595
              L +GW +FV+DN LK++D+C FEL++     ++VT+FR+  DP +
Sbjct: 327 GTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTVFRVHGDPTK 374


>ref|XP_004145348.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Cucumis sativus] gi|449471263|ref|XP_004153258.1|
           PREDICTED: B3 domain-containing transcription factor
           VRN1-like [Cucumis sativus]
          Length = 417

 Score =  100 bits (249), Expect = 3e-19
 Identities = 45/108 (41%), Positives = 68/108 (62%)
 Frame = +2

Query: 272 FTSKNPFCWVIMRPSYVRGWLKLRLQTRFGKKYLKEGVQHLTLKVSDGRTWPVMCSTVNR 451
           F   NPFCW++MR SY+R    L + ++F +KYLK     +TL+VS G+ W V C     
Sbjct: 309 FKFGNPFCWIVMRQSYIRRGFHLHIPSKFAEKYLKGVWGDITLQVSSGKQWRVRCIREGP 368

Query: 452 EYILMKGWENFVLDNHLKQDDICFFELVDKTHKNLEVTIFRLCRDPNQ 595
              L +GW +FV+DN LK++D+C FEL++     ++VT+FR+  DP +
Sbjct: 369 GTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTVFRVHGDPTK 416


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score =  100 bits (249), Expect = 3e-19
 Identities = 54/135 (40%), Positives = 76/135 (56%)
 Frame = +2

Query: 221 RSVSFREKERDILEATNFTSKNPFCWVIMRPSYVRGWLKLRLQTRFGKKYLKEGVQHLTL 400
           R V+  EK+R +  A  F   NPFC VI+R SYV     L + +RF +KYL    + + L
Sbjct: 277 RVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKL 336

Query: 401 KVSDGRTWPVMCSTVNREYILMKGWENFVLDNHLKQDDICFFELVDKTHKNLEVTIFRLC 580
           + SDG+ W V C +      L KGW  FV DN+L++ D+C FEL++     L+V+IFR+ 
Sbjct: 337 QTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVL 396

Query: 581 RDPNQYTRISAQSKN 625
            D     R+  QS N
Sbjct: 397 DD----ARVETQSSN 407


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