BLASTX nr result

ID: Coptis25_contig00018065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018065
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521107.1| catalytic, putative [Ricinus communis] gi|22...   131   5e-29
ref|XP_002301778.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002267331.2| PREDICTED: uncharacterized protein LOC100267...   111   7e-23
gb|AAF27010.1|AC016827_21 hypothetical protein [Arabidopsis thal...    96   2e-18
ref|NP_187362.3| NHL domain-containing protein [Arabidopsis thal...    94   9e-18

>ref|XP_002521107.1| catalytic, putative [Ricinus communis] gi|223539676|gb|EEF41258.1|
           catalytic, putative [Ricinus communis]
          Length = 767

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/111 (54%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = -1

Query: 359 KSKELDLEPLLTPWHLMKSRENNLLIVSRSFHTLWIMDPASGRIEKVVTGYPKILEICGQ 180
           KSKE D + L+ PWHL KS +++LLI++RSF +LWIMD ASG+I++++ G+PKILE CGQ
Sbjct: 392 KSKEFDSQLLMFPWHLFKSVDDSLLIINRSFESLWIMDLASGKIKEIIRGFPKILETCGQ 451

Query: 179 MITEKVSLLKQISKEKFEQEVYSS-TVEGFPIVSLVSSLVTFRNSIVFCDT 30
           +ITEKVSLLKQ+  +  +Q++ +S + EG P  SL+SS+ TF+N ++ CDT
Sbjct: 452 LITEKVSLLKQMPNDWLQQQIDASCSPEGLPFASLLSSVTTFQNHLIMCDT 502


>ref|XP_002301778.1| predicted protein [Populus trichocarpa] gi|222843504|gb|EEE81051.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/112 (51%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
 Frame = -1

Query: 359 KSKELDLEPLLTPWHLMKSRENNLLIVSRSFHTLWIMDPASGRIEKVVTGYPKILEICGQ 180
           KS+E D +PL+ PWHL+KS +N  LI+SRSF TLW++D  SG +++ + G+P ILE CGQ
Sbjct: 212 KSEEFDSQPLVFPWHLLKSVDNTFLIISRSFETLWVIDLVSGEMKECIKGFPNILETCGQ 271

Query: 179 MITEKVSLLKQISKEKFEQEV-YSSTVEGFPIVSLVSSLVTFRNSIVFCDTG 27
           +IT KVSLLKQ+  +  +Q+   + +++ FP  +LVS+L TF N IV CDTG
Sbjct: 272 LITGKVSLLKQLPIDYLKQQTDVNCSLKEFPYATLVSNLTTFENDIVLCDTG 323


>ref|XP_002267331.2| PREDICTED: uncharacterized protein LOC100267131 [Vitis vinifera]
          Length = 705

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/111 (49%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = -1

Query: 359 KSKELDLEPLLTPWHLMKSRENNLLIVSRSFHTLWIMDPASGRIEKVVTGYPKILEICGQ 180
           K  E D   L+ PWHL+K  + +L I++RSF TLWIM  ASG I++VV G PK+LEICG+
Sbjct: 331 KPAEFDSGLLMFPWHLIKLVDGDLFIINRSFETLWIMALASGEIKEVVRGIPKVLEICGE 390

Query: 179 MITEKVSLLKQISKEKFEQEVYSS-TVEGFPIVSLVSSLVTFRNSIVFCDT 30
           MI EK+++L ++  +  +Q+V S+ ++EG P   L+SSL TF++ IV CDT
Sbjct: 391 MIMEKLAVLNKMPHDWLQQQVDSNFSLEGIPYAGLMSSLATFQDDIVICDT 441


>gb|AAF27010.1|AC016827_21 hypothetical protein [Arabidopsis thaliana]
          Length = 648

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/112 (42%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 359 KSKELDLEPLLTPWHLMKSRENNLLIVSRSFHTLWIMDPASGRIEKVVTGYPKILEICGQ 180
           KS+E D   LL PWH++K  + +LL++++SF  LWI++ ASG IE+VV G+ KI+EICGQ
Sbjct: 330 KSEEFDARSLLFPWHILKRDDESLLVINKSFSKLWIINFASGEIEEVVEGFSKIIEICGQ 389

Query: 179 MITEKVSLLKQISKEKFEQEVYS-STVEGFPIVSLVSSLVTFRNSIVFCDTG 27
            ITEK+S+L+ +     +Q+  + ++ +  P  SL+SS     + IV  D G
Sbjct: 390 SITEKLSVLEHMPSNWLQQQTAAIASFKEQPSASLLSSFTKLGDDIVMTDIG 441


>ref|NP_187362.3| NHL domain-containing protein [Arabidopsis thaliana]
           gi|332640973|gb|AEE74494.1| NHL domain-containing
           protein [Arabidopsis thaliana]
          Length = 774

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
 Frame = -1

Query: 359 KSKELDLEPLLTPWHLMKSRENNLLIVSRSFHTLWIMDPASGRIEKVVTGYPKILEICGQ 180
           KS+E D   LL PWH++K  + +LL++++SF  LWI++ ASG IE+VV G+ KI+EICGQ
Sbjct: 395 KSEEFDARSLLFPWHILKRDDESLLVINKSFSKLWIINFASGEIEEVVEGFSKIIEICGQ 454

Query: 179 MITEKVSLLKQISKEKFEQEVYS-STVEGFPIVSLVSSLVTFRNSIVFCD 33
            ITEK+S+L+ +     +Q+  + ++ +  P  SL+SS     + IV  D
Sbjct: 455 SITEKLSVLEHMPSNWLQQQTAAIASFKEQPSASLLSSFTKLGDDIVMTD 504


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