BLASTX nr result

ID: Coptis25_contig00018062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018062
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284919.1| PREDICTED: dynamin-related protein 1C [Vitis...   608   e-172
emb|CAN64005.1| hypothetical protein VITISV_038022 [Vitis vinifera]   608   e-172
gb|ADN33706.1| dynamin [Cucumis melo subsp. melo]                     598   e-169
ref|XP_002533199.1| dynamin, putative [Ricinus communis] gi|2235...   592   e-167
ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|2...   583   e-164

>ref|XP_002284919.1| PREDICTED: dynamin-related protein 1C [Vitis vinifera]
            gi|297737626|emb|CBI26827.3| unnamed protein product
            [Vitis vinifera]
          Length = 613

 Score =  608 bits (1569), Expect = e-172
 Identities = 305/348 (87%), Positives = 325/348 (93%)
 Frame = +3

Query: 72   MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDF 251
            MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALP               LESVVGRDF
Sbjct: 1    MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDF 60

Query: 252  LPRGSGIVTRRPLVLQLHKTEAGQAEYGEFLHAPGKKFSDFADVRREISEETDRLTGKSK 431
            LPRGSGIVTRRPLVLQLHKTE GQAEYGEFLHAP KKF+DFA VR+EI +ETDR+TGK+K
Sbjct: 61   LPRGSGIVTRRPLVLQLHKTEQGQAEYGEFLHAPKKKFTDFASVRKEIQDETDRITGKTK 120

Query: 432  HISNKPIHLSIYSPNVVNLTLIDLPGMTKVATEGQPDSIVEDIDNMVRSYVEKPNCIILA 611
            HISN PIHLSIYSPNVV+LTLIDLPGMTKVA EGQPDSIVEDIDNMVRSYVEKPNCIILA
Sbjct: 121  HISNIPIHLSIYSPNVVDLTLIDLPGMTKVAVEGQPDSIVEDIDNMVRSYVEKPNCIILA 180

Query: 612  ISPANQDIATSDAIRLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRSYKLQHPWVG 791
            ISPANQDIATSDAI+LA+EVDP+GERTFGVLTKLDLMDKGTNA+DVLEGRSY+LQHPWVG
Sbjct: 181  ISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVG 240

Query: 792  IVNRSQADINKNVDMIAARRREREYFQSSPEYGHVANKMGSEYLAKLLSKHLEAVIRQRI 971
            IVNRSQADINKNVDMIAAR++EREYF+SSPEYGH+A+KMGSEYLAKLLS+HLE+VIRQRI
Sbjct: 241  IVNRSQADINKNVDMIAARQKEREYFESSPEYGHLAHKMGSEYLAKLLSQHLESVIRQRI 300

Query: 972  PSIIALINKTIDELEAELDRLGRPIGVDAGAQLYTILEMCRAFDRVFK 1115
            PSIIALINKTIDEL AELDR+GRPI VD+GAQLYTILEMCRAFDRVFK
Sbjct: 301  PSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDRVFK 348


>emb|CAN64005.1| hypothetical protein VITISV_038022 [Vitis vinifera]
          Length = 613

 Score =  608 bits (1569), Expect = e-172
 Identities = 305/348 (87%), Positives = 325/348 (93%)
 Frame = +3

Query: 72   MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDF 251
            MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALP               LESVVGRDF
Sbjct: 1    MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPTVAVVGGQSSGKSSVLESVVGRDF 60

Query: 252  LPRGSGIVTRRPLVLQLHKTEAGQAEYGEFLHAPGKKFSDFADVRREISEETDRLTGKSK 431
            LPRGSGIVTRRPLVLQLHKTE GQAEYGEFLHAP KKF+DFA VR+EI +ETDR+TGK+K
Sbjct: 61   LPRGSGIVTRRPLVLQLHKTEQGQAEYGEFLHAPKKKFTDFASVRKEIQDETDRITGKTK 120

Query: 432  HISNKPIHLSIYSPNVVNLTLIDLPGMTKVATEGQPDSIVEDIDNMVRSYVEKPNCIILA 611
            HISN PIHLSIYSPNVV+LTLIDLPGMTKVA EGQPDSIVEDIDNMVRSYVEKPNCIILA
Sbjct: 121  HISNIPIHLSIYSPNVVDLTLIDLPGMTKVAVEGQPDSIVEDIDNMVRSYVEKPNCIILA 180

Query: 612  ISPANQDIATSDAIRLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRSYKLQHPWVG 791
            ISPANQDIATSDAI+LA+EVDP+GERTFGVLTKLDLMDKGTNA+DVLEGRSY+LQHPWVG
Sbjct: 181  ISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVG 240

Query: 792  IVNRSQADINKNVDMIAARRREREYFQSSPEYGHVANKMGSEYLAKLLSKHLEAVIRQRI 971
            IVNRSQADINKNVDMIAAR++EREYF+SSPEYGH+A+KMGSEYLAKLLS+HLE+VIRQRI
Sbjct: 241  IVNRSQADINKNVDMIAARQKEREYFESSPEYGHLAHKMGSEYLAKLLSQHLESVIRQRI 300

Query: 972  PSIIALINKTIDELEAELDRLGRPIGVDAGAQLYTILEMCRAFDRVFK 1115
            PSIIALINKTIDEL AELDR+GRPI VD+GAQLYTILEMCRAFDRVFK
Sbjct: 301  PSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDRVFK 348


>gb|ADN33706.1| dynamin [Cucumis melo subsp. melo]
          Length = 612

 Score =  598 bits (1543), Expect = e-169
 Identities = 300/348 (86%), Positives = 322/348 (92%)
 Frame = +3

Query: 72   MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDF 251
            MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALP               LESVVGRDF
Sbjct: 1    MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDF 60

Query: 252  LPRGSGIVTRRPLVLQLHKTEAGQAEYGEFLHAPGKKFSDFADVRREISEETDRLTGKSK 431
            LPRGSGIVTRRPLVLQLHKT+ G+AEY EFLHAP KKF+DFA VR+EIS+ETDR+TGKSK
Sbjct: 61   LPRGSGIVTRRPLVLQLHKTDEGRAEYAEFLHAPKKKFADFASVRKEISDETDRITGKSK 120

Query: 432  HISNKPIHLSIYSPNVVNLTLIDLPGMTKVATEGQPDSIVEDIDNMVRSYVEKPNCIILA 611
             ISN PIHLSIYSPNVVNLTLIDLPG+TKVA EGQP+SIVEDI+NMVRSYVEKPNCIILA
Sbjct: 121  QISNIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPNCIILA 180

Query: 612  ISPANQDIATSDAIRLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRSYKLQHPWVG 791
            ISPANQDIATSDAI+LA+EVDPSGERTFGVLTKLDLMDKGTNA+DVLEGRSY+LQHPWVG
Sbjct: 181  ISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVG 240

Query: 792  IVNRSQADINKNVDMIAARRREREYFQSSPEYGHVANKMGSEYLAKLLSKHLEAVIRQRI 971
            IVNRSQADINKNVDMI AR++EREYF++SPEYGH+A+KMGSEYLAKLLS+HLE VIRQRI
Sbjct: 241  IVNRSQADINKNVDMIIARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLERVIRQRI 300

Query: 972  PSIIALINKTIDELEAELDRLGRPIGVDAGAQLYTILEMCRAFDRVFK 1115
            PSIIALINKTIDEL AELDR+GRPI VD+GAQLYTILEMCRAFDRVFK
Sbjct: 301  PSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDRVFK 348


>ref|XP_002533199.1| dynamin, putative [Ricinus communis] gi|223526997|gb|EEF29191.1|
            dynamin, putative [Ricinus communis]
          Length = 622

 Score =  592 bits (1525), Expect = e-167
 Identities = 295/348 (84%), Positives = 321/348 (92%)
 Frame = +3

Query: 72   MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDF 251
            MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALP               LESVVGRDF
Sbjct: 1    MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDF 60

Query: 252  LPRGSGIVTRRPLVLQLHKTEAGQAEYGEFLHAPGKKFSDFADVRREISEETDRLTGKSK 431
            LPRGSGIVTRRPLVLQLHK E G++EY EFLHAP K+FSDFA VRREI++ETDR+TGK+K
Sbjct: 61   LPRGSGIVTRRPLVLQLHKIEDGKSEYAEFLHAPKKRFSDFASVRREIADETDRITGKTK 120

Query: 432  HISNKPIHLSIYSPNVVNLTLIDLPGMTKVATEGQPDSIVEDIDNMVRSYVEKPNCIILA 611
             ISN PIHLSIYSPNVVNLTLIDLPG+TKVA EGQPDSIVEDI+NMVRSYVEKPN IILA
Sbjct: 121  QISNVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVEDIENMVRSYVEKPNSIILA 180

Query: 612  ISPANQDIATSDAIRLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRSYKLQHPWVG 791
            ISPANQDIATSDAI+LA+EVDP+GERTFGVLTKLDLMDKGTNA+DVLEGR+Y+LQHPWVG
Sbjct: 181  ISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRAYRLQHPWVG 240

Query: 792  IVNRSQADINKNVDMIAARRREREYFQSSPEYGHVANKMGSEYLAKLLSKHLEAVIRQRI 971
            IVNRSQADINKNVDMIAARR+EREYF++SPEYGH+++KMG+EYLAKLLSKHLE VIRQRI
Sbjct: 241  IVNRSQADINKNVDMIAARRKEREYFETSPEYGHLSSKMGAEYLAKLLSKHLETVIRQRI 300

Query: 972  PSIIALINKTIDELEAELDRLGRPIGVDAGAQLYTILEMCRAFDRVFK 1115
            PSIIALINKTIDEL AELDR+GRPI VD+GAQLYTILE+CRAFDR+FK
Sbjct: 301  PSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILELCRAFDRIFK 348


>ref|XP_002315854.1| predicted protein [Populus trichocarpa] gi|222864894|gb|EEF02025.1|
            predicted protein [Populus trichocarpa]
          Length = 613

 Score =  583 bits (1503), Expect = e-164
 Identities = 293/348 (84%), Positives = 320/348 (91%)
 Frame = +3

Query: 72   MATMESLIGLVNRIQRACTVLGDHGGEGMSLWEALPXXXXXXXXXXXXXXXLESVVGRDF 251
            MATMESLIGLVNRIQRACTVLGD+GGEGMSLWEALP               LESVVGRDF
Sbjct: 1    MATMESLIGLVNRIQRACTVLGDYGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDF 60

Query: 252  LPRGSGIVTRRPLVLQLHKTEAGQAEYGEFLHAPGKKFSDFADVRREISEETDRLTGKSK 431
            LPRGSGIVTRRPLVLQLHK + G ++Y EFLHAP KKF+DFA VR+EI++ETDR+TGKSK
Sbjct: 61   LPRGSGIVTRRPLVLQLHKIDGG-SDYAEFLHAPRKKFTDFASVRKEIADETDRITGKSK 119

Query: 432  HISNKPIHLSIYSPNVVNLTLIDLPGMTKVATEGQPDSIVEDIDNMVRSYVEKPNCIILA 611
             ISN PIHLSIYSPNVVNLTLIDLPG+TKVA EGQP+SIVEDI+NMVRSYVEKPN IILA
Sbjct: 120  QISNVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPNSIILA 179

Query: 612  ISPANQDIATSDAIRLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRSYKLQHPWVG 791
            ISPANQDIATSDAI+LA+EVDPSGERTFGVLTKLDLMDKGTNA+DV+EGRSY+LQHPWVG
Sbjct: 180  ISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNALDVIEGRSYRLQHPWVG 239

Query: 792  IVNRSQADINKNVDMIAARRREREYFQSSPEYGHVANKMGSEYLAKLLSKHLEAVIRQRI 971
            IVNRSQADINKNVDMIAARR+EREYF++SPEYGH+++KMG+EYLAKLLSKHLE VIRQRI
Sbjct: 240  IVNRSQADINKNVDMIAARRKEREYFETSPEYGHLSSKMGAEYLAKLLSKHLETVIRQRI 299

Query: 972  PSIIALINKTIDELEAELDRLGRPIGVDAGAQLYTILEMCRAFDRVFK 1115
            PSIIALINKTIDEL AELDR+GRPI VD+GAQLYTILE+CRAFDRVFK
Sbjct: 300  PSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILELCRAFDRVFK 347


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