BLASTX nr result

ID: Coptis25_contig00018060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018060
         (1774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   672   0.0  
emb|CBI15223.3| unnamed protein product [Vitis vinifera]              650   0.0  
ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|22...   646   0.0  
ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   604   e-170
ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucurono...   603   e-170

>ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase isoform 1
            [Vitis vinifera]
          Length = 498

 Score =  672 bits (1735), Expect = 0.0
 Identities = 337/497 (67%), Positives = 398/497 (80%), Gaps = 7/497 (1%)
 Frame = +1

Query: 4    MSEKSMKSSRYLLCLVTXXXXXXXXXXXXXXXXXXVALINGSVFRQILVNNSSAYIRPNT 183
            MSEKSM  SR+L CL+T                   + I  SVF+ ILVN++S Y + + 
Sbjct: 1    MSEKSMLPSRFLFCLITISMFLLILSSLFLLQFSNTSFIPNSVFKLILVNSTSVYFKSSG 60

Query: 184  NNNSDRSLDTTS---RISGKVP---NQNSQISIASKEVIEETIGRRNVCDTNQALLKIFM 345
             N   +    TS    +  K P     + QIS ASK++     GRR  CD NQA L+ FM
Sbjct: 61   KNEQTKLPFVTSVASPVDSKRPMGREGSCQISNASKKMDALGQGRRKGCDPNQAHLRAFM 120

Query: 346  YDLPPEFHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNTPSI 525
            YDLPPEFHFGLLGW G  NQIWP+VS   RIPSYPGGLNLQHSIEYWLTLDLL+S+TP+I
Sbjct: 121  YDLPPEFHFGLLGWTGKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNI 180

Query: 526  MRPCSAIRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRRDEW 705
            +RPCSAIRV NS+QAD IFVPFFSSLSYNRHS+ HGK K S+N++LQ++LV+FL+ +DEW
Sbjct: 181  VRPCSAIRVKNSSQADIIFVPFFSSLSYNRHSRLHGKEKVSVNKMLQDKLVNFLMGQDEW 240

Query: 706  KRWGGKDHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVVRS- 882
            K+ GGK+H+I+AHHPNSML+ RK+LGSAM VLADFGRYPVEIANIDKD+I PY+HV+RS 
Sbjct: 241  KQLGGKNHLIVAHHPNSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRSN 300

Query: 883  VNGDSADFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINKAAQ 1062
               DSA F  RP+LVYFQGAIYRKDGG IRQELYYLL+DEKDVHFTFGSV G+GIN A++
Sbjct: 301  PVADSATFEGRPLLVYFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGASE 360

Query: 1063 GMSSSKFCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPASDA 1242
            GM+SSKFCLNIAGDTPSSNRLFDAI SHCVPVIISDEIELP+ED+LDYSEFCIFV ASDA
Sbjct: 361  GMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCIFVRASDA 420

Query: 1243 MKKGFLLNLLKRIKRDKWTKMWEKLKDVAKHFEYQYPSQPGDAVDMIWEAISRKISSTSS 1422
            +K GFLLNLL+ IKR+KWTKMWE+LK++A HFEYQYPSQ GDAVDMIW A+SRKI   SS
Sbjct: 421  VKNGFLLNLLRGIKREKWTKMWERLKEIAHHFEYQYPSQAGDAVDMIWGAVSRKI---SS 477

Query: 1423 VQLRLHRRNRFRQTQLM 1473
            +Q +LHR+NR+R++Q++
Sbjct: 478  IQNKLHRKNRYRRSQIL 494


>emb|CBI15223.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  650 bits (1676), Expect = 0.0
 Identities = 326/491 (66%), Positives = 382/491 (77%), Gaps = 1/491 (0%)
 Frame = +1

Query: 4    MSEKSMKSSRYLLCLVTXXXXXXXXXXXXXXXXXXVALINGSVFRQILVNNSSAYIRPNT 183
            MSEKSM  SR+L CL+T                   + I  SVF+ ILVN++S       
Sbjct: 1    MSEKSMLPSRFLFCLITISMFLLILSSLFLLQFSNTSFIPNSVFKLILVNSTS------- 53

Query: 184  NNNSDRSLDTTSRISGKVPNQNSQISIASKEVIEETIGRRNVCDTNQALLKIFMYDLPPE 363
                   +D   +                        GRR  CD NQA L+ FMYDLPPE
Sbjct: 54   ------KMDALGQ------------------------GRRKGCDPNQAHLRAFMYDLPPE 83

Query: 364  FHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNTPSIMRPCSA 543
            FHFGLLGW G  NQIWP+VS   RIPSYPGGLNLQHSIEYWLTLDLL+S+TP+I+RPCSA
Sbjct: 84   FHFGLLGWTGKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNIVRPCSA 143

Query: 544  IRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRRDEWKRWGGK 723
            IRV NS+QAD IFVPFFSSLSYNRHS+ HGK K S+N++LQ++LV+FL+ +DEWK+ GGK
Sbjct: 144  IRVKNSSQADIIFVPFFSSLSYNRHSRLHGKEKVSVNKMLQDKLVNFLMGQDEWKQLGGK 203

Query: 724  DHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVVRS-VNGDSA 900
            +H+I+AHHPNSML+ RK+LGSAM VLADFGRYPVEIANIDKD+I PY+HV+RS    DSA
Sbjct: 204  NHLIVAHHPNSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRSNPVADSA 263

Query: 901  DFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINKAAQGMSSSK 1080
             F  RP+LVYFQGAIYRKDGG IRQELYYLL+DEKDVHFTFGSV G+GIN A++GM+SSK
Sbjct: 264  TFEGRPLLVYFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGASEGMASSK 323

Query: 1081 FCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPASDAMKKGFL 1260
            FCLNIAGDTPSSNRLFDAI SHCVPVIISDEIELP+ED+LDYSEFCIFV ASDA+K GFL
Sbjct: 324  FCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCIFVRASDAVKNGFL 383

Query: 1261 LNLLKRIKRDKWTKMWEKLKDVAKHFEYQYPSQPGDAVDMIWEAISRKISSTSSVQLRLH 1440
            LNLL+ IKR+KWTKMWE+LK++A HFEYQYPSQ GDAVDMIW A+SRKI   SS+Q +LH
Sbjct: 384  LNLLRGIKREKWTKMWERLKEIAHHFEYQYPSQAGDAVDMIWGAVSRKI---SSIQNKLH 440

Query: 1441 RRNRFRQTQLM 1473
            R+NR+R++Q++
Sbjct: 441  RKNRYRRSQIL 451


>ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|223546364|gb|EEF47866.1|
            catalytic, putative [Ricinus communis]
          Length = 490

 Score =  646 bits (1666), Expect = 0.0
 Identities = 318/499 (63%), Positives = 387/499 (77%), Gaps = 10/499 (2%)
 Frame = +1

Query: 4    MSEKSMKSSRYLLCLVTXXXXXXXXXXXXXXXXXXVALINGSVFRQILVNNSSAYIRPNT 183
            MSEKS  SSR+L  L+                    + +  SV + ILVN++S Y++ N 
Sbjct: 1    MSEKSRLSSRFLFFLIPISMFLFIIFSVSLLQLSSTSFLPSSVIKLILVNSTSIYLKSNV 60

Query: 184  NN--------NSDRSLDTTSRI-SGKVPNQNSQISIASKEVIEETIGRRNVCDTNQALLK 336
             N        +S  S DT S + SG     N +++ + K +        N C+ NQ LLK
Sbjct: 61   KNELGKFPFFSSKPSQDTRSSMRSGGENCSNFEVAASGKHI-------GNTCNPNQGLLK 113

Query: 337  IFMYDLPPEFHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNT 516
            ++MYD+PPEFHFGLLGWKG  NQIWP+V  L+ IP YPGGLNLQHSIEYWLTLDLLASN 
Sbjct: 114  VYMYDMPPEFHFGLLGWKGKANQIWPNVDDLDHIPLYPGGLNLQHSIEYWLTLDLLASNR 173

Query: 517  PSIMRPCSAIRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRR 696
            P ++RPC A+RV NS+QAD IFVP+FSSLSYNRHSK HGK K S+N++LQ RLV+FL+ +
Sbjct: 174  PKVVRPCGAVRVDNSSQADIIFVPYFSSLSYNRHSKLHGKEKVSMNKMLQNRLVEFLMGQ 233

Query: 697  DEWKRWGGKDHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVV 876
            DEWKR GG+DH+I+AHHPNSML+ RK LG+AM VLADFGRYPVEIAN+ KD+I PY+HVV
Sbjct: 234  DEWKRSGGRDHLIVAHHPNSMLDARKMLGAAMFVLADFGRYPVEIANLKKDVIAPYKHVV 293

Query: 877  RSV-NGDSADFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINK 1053
            R++ +G+SA F  RPILV+FQGAIYRKDGG IRQELYYLLKDEKDVHFTFG+V  +G+NK
Sbjct: 294  RTIPSGESAQFEERPILVFFQGAIYRKDGGIIRQELYYLLKDEKDVHFTFGTVRKNGVNK 353

Query: 1054 AAQGMSSSKFCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPA 1233
            A QGM+SSKFCLNIAGDTPSSNRLFDAI SHCVPVIISD+IELP+ED+LDYSEF +FV A
Sbjct: 354  AGQGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDDIELPFEDVLDYSEFSVFVRA 413

Query: 1234 SDAMKKGFLLNLLKRIKRDKWTKMWEKLKDVAKHFEYQYPSQPGDAVDMIWEAISRKISS 1413
            SDA+K+G+LLNLL+ I RDKWT MWE+LK++A HFEYQYPSQ GDAVDMIW+A+SRK+  
Sbjct: 414  SDAVKEGYLLNLLQSIDRDKWTMMWERLKEIAPHFEYQYPSQSGDAVDMIWQAVSRKL-- 471

Query: 1414 TSSVQLRLHRRNRFRQTQL 1470
             S VQL +HRRNR+ + ++
Sbjct: 472  -SPVQLTIHRRNRYSRFEI 489


>ref|XP_003550781.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine
            max]
          Length = 472

 Score =  604 bits (1558), Expect = e-170
 Identities = 297/487 (60%), Positives = 365/487 (74%), Gaps = 1/487 (0%)
 Frame = +1

Query: 4    MSEKSMKSSRYLLCLVTXXXXXXXXXXXXXXXXXXVALINGSVFRQILVNNSSAYIRPNT 183
            MS+K+M  SR++ C++                    + I  SV   +LVNN+S   +PN 
Sbjct: 1    MSDKNMVPSRFIFCVIVIAVFLLVLSSFFLIHLSNHSFIPRSVSELVLVNNTSLDFKPNF 60

Query: 184  NNNSDRSLDTTSRISGKVPNQNSQISIASKEVIEETIGRRNVCDTNQALLKIFMYDLPPE 363
                            +V  Q+ Q S +S +       R+  CD   ALL++FMYDLPPE
Sbjct: 61   KRE-------------QVQPQSCQFSNSSHKPSSPRQQRKIPCDPTNALLRVFMYDLPPE 107

Query: 364  FHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNTPSIMRPCSA 543
            FHFGLL WKGN NQ WP+V+    IP YPGGLNLQHS+EYWLTLDLL+SN     RPC+A
Sbjct: 108  FHFGLLDWKGNVNQTWPNVNNPKHIPPYPGGLNLQHSVEYWLTLDLLSSNIAENFRPCTA 167

Query: 544  IRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRRDEWKRWGGK 723
            IRV NS QAD +FVPFFSSLSYNRHSK HGK K S+NR+LQ+RLV  L+ R+EWKR GG+
Sbjct: 168  IRVQNSRQADVVFVPFFSSLSYNRHSKIHGKEKVSVNRMLQQRLVQLLMEREEWKRSGGR 227

Query: 724  DHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVVRSV-NGDSA 900
            DH+I+AHHPNS+L  R++LGSAMLVLADFGRYP ++ANI KDII PYRH+V +V   +SA
Sbjct: 228  DHVIVAHHPNSILRARRKLGSAMLVLADFGRYPSQLANIKKDIIAPYRHLVSTVPRAESA 287

Query: 901  DFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINKAAQGMSSSK 1080
             +  R  L+YFQGAIYRKDGG IRQ+LYYLLKDEKDVHF FGS+  +GIN+A+QGM+ SK
Sbjct: 288  SYEERSTLLYFQGAIYRKDGGAIRQKLYYLLKDEKDVHFAFGSIRKNGINQASQGMALSK 347

Query: 1081 FCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPASDAMKKGFL 1260
            FCLN+AGDTPSSNRLFDAI SHCVPVIISDEIELP+ED+LDYSEF +FV ASDA++KG+L
Sbjct: 348  FCLNVAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFGLFVHASDAVRKGYL 407

Query: 1261 LNLLKRIKRDKWTKMWEKLKDVAKHFEYQYPSQPGDAVDMIWEAISRKISSTSSVQLRLH 1440
            LNLL+ IK +KWT+MWE+LKD+ +HFEYQYPSQPGDAV+MIWE ++ KI   SS+Q  LH
Sbjct: 408  LNLLRSIKPEKWTQMWERLKDITQHFEYQYPSQPGDAVNMIWEEVAHKI---SSLQFNLH 464

Query: 1441 RRNRFRQ 1461
            R+NR+++
Sbjct: 465  RKNRYQR 471


>ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like
            [Cucumis sativus]
          Length = 494

 Score =  603 bits (1556), Expect = e-170
 Identities = 292/493 (59%), Positives = 378/493 (76%), Gaps = 3/493 (0%)
 Frame = +1

Query: 4    MSEKSMKSSRYLLCLVTXXXXXXXXXXXXXXXXXXVALINGSVFRQILVNNSSAYIRPNT 183
            MSEKSM  +R  L L+T                   +    SV + I+VNN+S Y++PN 
Sbjct: 1    MSEKSMLPTRLFLYLITVSMFLLILSSVFILQSNYNSFFPSSVLKFIVVNNTSNYLKPNV 60

Query: 184  NNNSDRSLDTTSRISGKVPNQNSQISIASKEVIEETIGRRNV--CDTNQALLKIFMYDLP 357
             +               V +++    +++    E ++  ++   CD  +A L++FMYDLP
Sbjct: 61   EDEPMELPTQPGEAKEAVTDRDVDYPVSNFVKDEVSVENQSDLGCDPAKARLRVFMYDLP 120

Query: 358  PEFHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNTPSIMRPC 537
            P +HFGLLGWKG  +QIWP VS  ++IP YPGGLNLQHS+EYWLTLDLL+SN P +   C
Sbjct: 121  PLYHFGLLGWKGEKDQIWPYVSNRSQIPPYPGGLNLQHSMEYWLTLDLLSSNVPDMDHTC 180

Query: 538  SAIRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRRDEWKRWG 717
            +A+RV +S+QAD IFVPFFSSLSYN+HSK+HGK K ++N++LQ++L+DFL  + EW+R G
Sbjct: 181  TAVRVKDSSQADVIFVPFFSSLSYNQHSKSHGKEKINVNKILQQKLIDFLFGQKEWRRTG 240

Query: 718  GKDHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVVRSV-NGD 894
            GK+H+++AHHPNSML+ RK+LGSAM VLADFGRYP  IANI+KDII PYRH+V++V +  
Sbjct: 241  GKNHLVIAHHPNSMLDARKKLGSAMFVLADFGRYPAAIANIEKDIIAPYRHIVKTVPSSK 300

Query: 895  SADFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINKAAQGMSS 1074
            SA F+ RPILVYFQGAIYRKDGG +RQELYYLLKDE+DVHFTFGSV G+GINKA QGM+S
Sbjct: 301  SATFDERPILVYFQGAIYRKDGGVVRQELYYLLKDEEDVHFTFGSVKGNGINKAGQGMAS 360

Query: 1075 SKFCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPASDAMKKG 1254
            SKFCLNIAGDTPSSNRLFD+I+SHCVPVIISD+IELPYEDILDYSEFC+FV A+D+++KG
Sbjct: 361  SKFCLNIAGDTPSSNRLFDSIASHCVPVIISDDIELPYEDILDYSEFCVFVRAADSIRKG 420

Query: 1255 FLLNLLKRIKRDKWTKMWEKLKDVAKHFEYQYPSQPGDAVDMIWEAISRKISSTSSVQLR 1434
            +LLNLL+ I R++WTKMW+++K++   FEYQYPSQ GDAVDMIW+A+SRK+S   S    
Sbjct: 421  YLLNLLRGIGRERWTKMWDRIKEIVHEFEYQYPSQSGDAVDMIWQAVSRKVSKIKS---N 477

Query: 1435 LHRRNRFRQTQLM 1473
             +R+NR+ ++QL+
Sbjct: 478  RNRKNRYSRSQLL 490


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