BLASTX nr result

ID: Coptis25_contig00018048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018048
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266...   416   e-114
ref|XP_002510268.1| transcription factor, putative [Ricinus comm...   409   e-112
emb|CAN66295.1| hypothetical protein VITISV_012600 [Vitis vinifera]   408   e-111
ref|XP_002327110.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_002310156.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109

>ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266128 [Vitis vinifera]
            gi|302142367|emb|CBI19570.3| unnamed protein product
            [Vitis vinifera]
          Length = 573

 Score =  416 bits (1069), Expect = e-114
 Identities = 219/350 (62%), Positives = 257/350 (73%), Gaps = 2/350 (0%)
 Frame = -2

Query: 1235 SLEKRLEPVKIKLECRVV-QDIAEERSMDMLEERTSEGSSPNKISEEVLKCLSRIFLRMN 1059
            S EK L+  K++LE RVV Q+ AE R+    +ER S    PNKISE++L+CL  IFLRM+
Sbjct: 220  SAEKHLDSQKLQLENRVVDQENAETRTSLTPDERLSADDKPNKISEDILRCLFSIFLRMS 279

Query: 1058 TQKYRHSESEMFSSVKQVAYHENNDETECQDPYGIC-KLRKRDIGSYKHLRAIEAHSIDA 882
            T K R + SE   S+  +A H + +ETE QDPYGIC +  KRDIG YKHL +I+A SI+ 
Sbjct: 280  TLKSRGT-SENLPSLPSLASHGSGEETELQDPYGICSEFGKRDIGPYKHLFSIQASSINL 338

Query: 881  NRTTTXXXXXXXXXXXXXXXXXXXXKGLTHQQKLAFWINIYNSCMMNAFLEYGIPESPQK 702
            NRT                      +GLTHQ+KLAFWIN YNSCMMNAFLE+GIP +P+ 
Sbjct: 339  NRTANSLFLVHRLKRLLGKLASVNLQGLTHQEKLAFWINTYNSCMMNAFLEHGIPGNPEM 398

Query: 701  VVALMQKAMINIGGQSLNAMTIEHFILRLPHHMKSTSLKGDTNDEMKKRSILGLEWSEPL 522
            VV LM+KA IN+GG  LNA+TIEHFILRLP+H+K T  KG  NDEM  RSI GLE SEPL
Sbjct: 399  VVELMRKATINVGGHLLNAITIEHFILRLPYHIKYTFPKGAKNDEMTARSIYGLELSEPL 458

Query: 521  ITFALSCGSWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDF 342
            +TFALSCGSWSSPAVRVYTASQVENELE AK +YLQAAVGIS++    IPKLLDWYLLDF
Sbjct: 459  VTFALSCGSWSSPAVRVYTASQVENELEVAKREYLQAAVGISTTKLFAIPKLLDWYLLDF 518

Query: 341  AKDLESLLDWICLQLPDDMRNEAIRCLERGKGESLSHSVQVVPYEFAFRY 192
            AKD ES LDWICLQLP ++  EAI+CLERG  E LS  VQV+PYEF+FRY
Sbjct: 519  AKDFESFLDWICLQLPSELGKEAIKCLERGNSEPLSQFVQVIPYEFSFRY 568


>ref|XP_002510268.1| transcription factor, putative [Ricinus communis]
            gi|223550969|gb|EEF52455.1| transcription factor,
            putative [Ricinus communis]
          Length = 533

 Score =  409 bits (1051), Expect = e-112
 Identities = 210/348 (60%), Positives = 258/348 (74%), Gaps = 1/348 (0%)
 Frame = -2

Query: 1232 LEKRLEPVKIKLECRVVQDIAEERSMDMLEERTSEGSSPNKISEEVLKCLSRIFLRMNTQ 1053
            +EK L+P K+++     ++  E R++   +E  S   +PNKISE+++KCLS IFLRM+++
Sbjct: 187  IEKCLDPQKLQVS---QENPKEARNVSTADEHLSANDNPNKISEDIVKCLSNIFLRMSSR 243

Query: 1052 KYRHSESEMFSSVKQVAYHENNDETECQDPYGIC-KLRKRDIGSYKHLRAIEAHSIDANR 876
            K R +   + S +  +   EN +E EC+DPY IC ++ K+DIG YKHL AIEA +I+ NR
Sbjct: 244  KTRRTADNL-SFLSSLVSQENGEEIECRDPYSICSEVGKKDIGPYKHLFAIEAGTINPNR 302

Query: 875  TTTXXXXXXXXXXXXXXXXXXXXKGLTHQQKLAFWINIYNSCMMNAFLEYGIPESPQKVV 696
            T+                     + LTHQ+KLAFWINIYNSCMMNAFLE+GIPESP+ VV
Sbjct: 303  TSNSLFLLHRLKLLLGKLASVNLQNLTHQEKLAFWINIYNSCMMNAFLEHGIPESPEMVV 362

Query: 695  ALMQKAMINIGGQSLNAMTIEHFILRLPHHMKSTSLKGDTNDEMKKRSILGLEWSEPLIT 516
            ALMQKA IN+GG SLNA+TIEHFILRLP+H+K    KG  NDEM  RS  GLE SEPL+T
Sbjct: 363  ALMQKATINVGGHSLNAITIEHFILRLPYHLKYAFSKGTKNDEMTARSKFGLELSEPLVT 422

Query: 515  FALSCGSWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAK 336
            FALSCGSWSSPAVRVYTAS+VENEL+AAK +YLQAAVG  S+ K  IPKLLDWYLLDFAK
Sbjct: 423  FALSCGSWSSPAVRVYTASEVENELDAAKREYLQAAVGF-STRKFAIPKLLDWYLLDFAK 481

Query: 335  DLESLLDWICLQLPDDMRNEAIRCLERGKGESLSHSVQVVPYEFAFRY 192
            DLESLLDWICLQLP ++  EAI+CLERGK E  S  VQ++PYEF+FRY
Sbjct: 482  DLESLLDWICLQLPSELGKEAIKCLERGKSEPHSQFVQIMPYEFSFRY 529


>emb|CAN66295.1| hypothetical protein VITISV_012600 [Vitis vinifera]
          Length = 682

 Score =  408 bits (1049), Expect = e-111
 Identities = 217/362 (59%), Positives = 259/362 (71%), Gaps = 16/362 (4%)
 Frame = -2

Query: 1232 LEKRLEPVKIKLECRVV-QDIAEERSMDMLEERTSEGSS-PNKISEEVLKCLSRIFLRMN 1059
            +EK  +P+K++LECR+V Q+ A+E S   L+ER SE  S PNKISE+++KCLS IFLRM+
Sbjct: 260  VEKFRDPLKLQLECRLVDQERAQESSCASLDERVSEADSGPNKISEDIVKCLSSIFLRMS 319

Query: 1058 TQKYRHSESEMFSSVKQVAYHENNDETECQDPYGIC-KLRKRDIGSYKHLRAIEAHSIDA 882
            T + +  ES+        A +E+N E E  DPYGIC +   R++G YKHL  I+A S+D 
Sbjct: 320  TLREKVVESDATPPPLAFASNESNGEAESLDPYGICLEFGARNVGPYKHLCDIQAGSVDL 379

Query: 881  NRTTTXXXXXXXXXXXXXXXXXXXXKGLTHQQKLAFWINIYNSCMMN------------- 741
            NR T                     +GLTHQQKLAFWINIYNSCMMN             
Sbjct: 380  NRKTNALFLIHRLKLLLGKLACVNLEGLTHQQKLAFWINIYNSCMMNKSKARVLILPVFQ 439

Query: 740  AFLEYGIPESPQKVVALMQKAMINIGGQSLNAMTIEHFILRLPHHMKSTSLKGDTNDEMK 561
            AFLE+G+PE+P+ VVALMQKA IN+GG  LNA+TIEHFILRLP+H+K T  K    DEMK
Sbjct: 440  AFLEHGVPENPEMVVALMQKATINVGGCLLNAITIEHFILRLPYHLKYTCSKAAKXDEMK 499

Query: 560  KRSILGLEWSEPLITFALSCGSWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKL 381
             RS  GLEWSEPL+TFALSCGSWSSPAVRVYTAS+VE ELE AK DYL AAVGIS +NKL
Sbjct: 500  ARSTFGLEWSEPLVTFALSCGSWSSPAVRVYTASEVEIELEVAKRDYLHAAVGISXTNKL 559

Query: 380  VIPKLLDWYLLDFAKDLESLLDWICLQLPDDMRNEAIRCLERGKGESLSHSVQVVPYEFA 201
            +IPKLLDWYLLDFAKD ES LDWI LQLPDD+RNEA++CLER     LS  VQV+PY+F+
Sbjct: 560  IIPKLLDWYLLDFAKDFESFLDWISLQLPDDLRNEAVKCLERRGRGPLSQLVQVMPYDFS 619

Query: 200  FR 195
            FR
Sbjct: 620  FR 621


>ref|XP_002327110.1| predicted protein [Populus trichocarpa] gi|222835425|gb|EEE73860.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  404 bits (1038), Expect = e-110
 Identities = 213/348 (61%), Positives = 253/348 (72%), Gaps = 2/348 (0%)
 Frame = -2

Query: 1229 EKRLEPVKIKLECRVV-QDIAEERSMDMLEERTSEGSSPNKISEEVLKCLSRIFLRMNTQ 1053
            EK+L+  K +LECRV  Q+ AE RS     E  S  +SPNK+SE++LKCLS IF+RM++ 
Sbjct: 95   EKKLDSHKSQLECRVPDQENAEARSHVTASEGVSGDASPNKLSEDILKCLSSIFVRMSSM 154

Query: 1052 KYRHSESEMFSSVKQVAYHENNDETECQDPYGIC-KLRKRDIGSYKHLRAIEAHSIDANR 876
              R +   + S +  +   EN +E ECQDPYGIC +  KRDIG YK L +IE+ +I+ NR
Sbjct: 155  NNRRTADNL-SFLSTLVSQENEEEAECQDPYGICSEFGKRDIGPYKRLFSIESGTINPNR 213

Query: 875  TTTXXXXXXXXXXXXXXXXXXXXKGLTHQQKLAFWINIYNSCMMNAFLEYGIPESPQKVV 696
            T+                     + LTHQ+KLAFWINIYNSCMMNAFLE+GIPESP+ VV
Sbjct: 214  TSNSLFLLHRLELLFGKLASVNLQNLTHQKKLAFWINIYNSCMMNAFLEHGIPESPETVV 273

Query: 695  ALMQKAMINIGGQSLNAMTIEHFILRLPHHMKSTSLKGDTNDEMKKRSILGLEWSEPLIT 516
             LM+KA INIGG  LNA+TIEHFILRLP++ K T  KG  NDEM  R+  GLE SEPL++
Sbjct: 274  ELMRKATINIGGHLLNAITIEHFILRLPYYSKYTISKGAKNDEMAARNKFGLELSEPLVS 333

Query: 515  FALSCGSWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAK 336
            FAL CGSWSSPAVRVYTA+QVENELE AK DYLQAA+GI++S K  IPKLLDWYLLDFAK
Sbjct: 334  FALCCGSWSSPAVRVYTAAQVENELEEAKRDYLQAAIGITTS-KFAIPKLLDWYLLDFAK 392

Query: 335  DLESLLDWICLQLPDDMRNEAIRCLERGKGESLSHSVQVVPYEFAFRY 192
            DLESLLDWICLQLP ++  EAI CLE GK E  SH VQV+PYEF FRY
Sbjct: 393  DLESLLDWICLQLPSELGKEAINCLENGKNEPHSHFVQVMPYEFGFRY 440


>ref|XP_002310156.1| predicted protein [Populus trichocarpa] gi|222853059|gb|EEE90606.1|
            predicted protein [Populus trichocarpa]
          Length = 574

 Score =  401 bits (1031), Expect = e-109
 Identities = 209/350 (59%), Positives = 253/350 (72%), Gaps = 3/350 (0%)
 Frame = -2

Query: 1235 SLEKRLEPVKIKLECRVV-QDIAEERSMDMLEERTSEGS-SPNKISEEVLKCLSRIFLRM 1062
            S EK LEP K++LECR++ Q+ A+E +   + +R  E + +PNK++E+++KCLS IFLRM
Sbjct: 244  SEEKSLEPSKLQLECRLIEQERAQESTSAYMNDRICENNITPNKLTEDIVKCLSSIFLRM 303

Query: 1061 NTQKYRHSESEMFSSVKQVAYHENNDETECQDPYGI-CKLRKRDIGSYKHLRAIEAHSID 885
            +T                          E +DPYG+  + + RDIGSYKHL AIEA SID
Sbjct: 304  STGN------------------------EIRDPYGMSAEFKIRDIGSYKHLYAIEASSID 339

Query: 884  ANRTTTXXXXXXXXXXXXXXXXXXXXKGLTHQQKLAFWINIYNSCMMNAFLEYGIPESPQ 705
             NRTT+                    +GLTHQQKLAFWIN YNSCMMNA LE+GIPE+P+
Sbjct: 340  LNRTTSALFLLQRLRFLLGKLAAANLEGLTHQQKLAFWINTYNSCMMNAILEHGIPETPE 399

Query: 704  KVVALMQKAMINIGGQSLNAMTIEHFILRLPHHMKSTSLKGDTNDEMKKRSILGLEWSEP 525
             VVALMQKA I +GG  LNA+TIEHFILRLP+H+K T  K   NDEMK RSI G EWSEP
Sbjct: 400  MVVALMQKATITVGGHLLNAITIEHFILRLPYHLKFTCPKAVKNDEMKARSIFGFEWSEP 459

Query: 524  LITFALSCGSWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLD 345
            L+TFAL CGSWSSPAVRVYTAS+VE ELE AK DYLQA VGIS +NKL+IPKLLDWYLLD
Sbjct: 460  LVTFALCCGSWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLD 519

Query: 344  FAKDLESLLDWICLQLPDDMRNEAIRCLERGKGESLSHSVQVVPYEFAFR 195
            FAKD+ESLLDWICLQLP+++RNEA++CLER   + LS  VQV+PY+F+FR
Sbjct: 520  FAKDMESLLDWICLQLPNELRNEAVKCLERRGRDPLSQIVQVMPYDFSFR 569


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