BLASTX nr result

ID: Coptis25_contig00018040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018040
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267096.1| PREDICTED: uncharacterized protein LOC100257...   122   3e-26
ref|XP_002306699.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002266605.1| PREDICTED: uncharacterized protein LOC100252...   114   8e-24
emb|CAN69923.1| hypothetical protein VITISV_025318 [Vitis vinifera]   114   8e-24
ref|XP_004170252.1| PREDICTED: UPF0496 protein 4-like isoform 1 ...   114   1e-23

>ref|XP_002267096.1| PREDICTED: uncharacterized protein LOC100257198 isoform 1 [Vitis
           vinifera] gi|359493118|ref|XP_003634513.1| PREDICTED:
           uncharacterized protein LOC100257198 isoform 2 [Vitis
           vinifera]
          Length = 387

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/93 (65%), Positives = 75/93 (80%)
 Frame = +3

Query: 87  ASLGRSILSIRRDQVHNMDGNNEASAQEAELEQFQKQVADRFNDLSAVSNEDLLSLGWIR 266
           +++GRSILSIRRDQVH+M+G +E +  E ELE FQ+QVADRF  +S+ S+E LLSL W+R
Sbjct: 14  SNIGRSILSIRRDQVHSMEGTHEVTGLEVELEAFQRQVADRFLQVSSGSSE-LLSLSWVR 72

Query: 267 RLLDEFICCQEEFRGILFNNKGHLCRQPMDRFI 365
           +LLD F+CCQEEFR ILFNNK  L R PMDR I
Sbjct: 73  KLLDVFLCCQEEFRVILFNNKASLGRAPMDRLI 105


>ref|XP_002306699.1| predicted protein [Populus trichocarpa] gi|222856148|gb|EEE93695.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = +3

Query: 87  ASLGRSILSIRRDQVHNMDGNNEASAQEAELEQFQKQVADRFNDLSAVSNEDLLSLGWIR 266
           ASL  SIL +RRDQVH+MD     S  E EL+ FQKQV DRF DLSAV  + LLSL WIR
Sbjct: 11  ASLRHSILGLRRDQVHSMDSPQTTSTLELELDAFQKQVTDRFLDLSAVGPDRLLSLAWIR 70

Query: 267 RLLDEFICCQEEFRGILFNNKGHLCRQPMDRFI 365
           +LLD F+CCQEEFR ILFNNK  + R P+DR +
Sbjct: 71  KLLDSFLCCQEEFRVILFNNKSLVHRPPLDRLV 103


>ref|XP_002266605.1| PREDICTED: uncharacterized protein LOC100252142 [Vitis vinifera]
           gi|296081482|emb|CBI20005.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/92 (55%), Positives = 72/92 (78%)
 Frame = +3

Query: 90  SLGRSILSIRRDQVHNMDGNNEASAQEAELEQFQKQVADRFNDLSAVSNEDLLSLGWIRR 269
           S GRSILSIRR+Q+H+M+ N++ + QE+E+E F + ++ RF+DLS VS ++LLSL W+ +
Sbjct: 15  SFGRSILSIRREQIHSMEANHDPNTQESEIELFLQLISKRFHDLSVVSADELLSLAWMWK 74

Query: 270 LLDEFICCQEEFRGILFNNKGHLCRQPMDRFI 365
           LLD FICC EEFR IL NNK  +C+ P+DR +
Sbjct: 75  LLDAFICCHEEFRVILLNNKVQVCKPPLDRLV 106


>emb|CAN69923.1| hypothetical protein VITISV_025318 [Vitis vinifera]
          Length = 392

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/92 (55%), Positives = 72/92 (78%)
 Frame = +3

Query: 90  SLGRSILSIRRDQVHNMDGNNEASAQEAELEQFQKQVADRFNDLSAVSNEDLLSLGWIRR 269
           S GRSILSIRR+Q+H+M+ N++ + QE+E+E F + ++ RF+DLS VS ++LLSL W+ +
Sbjct: 15  SFGRSILSIRREQIHSMEANHDPNTQESEIELFLQLISKRFHDLSVVSADELLSLAWMWK 74

Query: 270 LLDEFICCQEEFRGILFNNKGHLCRQPMDRFI 365
           LLD FICC EEFR IL NNK  +C+ P+DR +
Sbjct: 75  LLDAFICCHEEFRVILLNNKVQVCKPPLDRLV 106


>ref|XP_004170252.1| PREDICTED: UPF0496 protein 4-like isoform 1 [Cucumis sativus]
           gi|449526503|ref|XP_004170253.1| PREDICTED: UPF0496
           protein 4-like isoform 2 [Cucumis sativus]
          Length = 394

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/95 (53%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +3

Query: 84  IASLGRSILSIRRDQVHNMDGNN-EASAQEAELEQFQKQVADRFNDLSAVSNEDLLSLGW 260
           + ++GRSI S+RRDQVH+M+G++ +    +++L+ FQKQV  RF DLS+ S++D+LSL W
Sbjct: 13  LTNIGRSIFSLRRDQVHSMEGSSHDGIVLDSDLDSFQKQVTQRFQDLSSASSDDILSLSW 72

Query: 261 IRRLLDEFICCQEEFRGILFNNKGHLCRQPMDRFI 365
           IR+LLD FICCQEEF+ IL  +K  +CR P+DR +
Sbjct: 73  IRKLLDAFICCQEEFKIILNGHKAEICRPPIDRMV 107


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