BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018025
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   187   8e-46
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   176   1e-42
gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo...   174   5e-42
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi...   174   5e-42
ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group] g...   174   5e-42

>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/143 (61%), Positives = 108/143 (75%)
 Frame = -3

Query: 431 PLESGKCESCGTAEPGKCDGHFGYIEFPIKIYHPCHVSELKRLLSTVCLKCLRLKRTKIR 252
           PLE GKCESCGTAEPG+C+GHFGYIE PI IYHP HVSELKR+LS +CLKCL+++++K+ 
Sbjct: 50  PLEFGKCESCGTAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVT 109

Query: 251 QNVGSDRPSNIPCSFCLDIPQILVNEFKTTDGVVFLELKVVTRSIPHNGFWNFLDKYGYR 72
            N G       PC  C D PQ+ V EF+ T+G  FLELK+ +RS P +GFW+FL +YGYR
Sbjct: 110 NN-GITEQLLAPC--CQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYR 166

Query: 71  YGEGKSRILLPCEVLEILNKFSE 3
           YG   SRILLP EV+EIL +  E
Sbjct: 167 YGHNLSRILLPSEVMEILRRIPE 189


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  176 bits (447), Expect = 1e-42
 Identities = 83/143 (58%), Positives = 106/143 (74%)
 Frame = -3

Query: 431 PLESGKCESCGTAEPGKCDGHFGYIEFPIKIYHPCHVSELKRLLSTVCLKCLRLKRTKIR 252
           PLE GKCESCGT+EPGKC+GHFGYIE PI IYHP HVSELKR+LS +CLKCL+LK  KI+
Sbjct: 53  PLEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIK 112

Query: 251 QNVGSDRPSNIPCSFCLDIPQILVNEFKTTDGVVFLELKVVTRSIPHNGFWNFLDKYGYR 72
            +  ++R      S C +  QI + E KTTDG   L+LK+ +R    +GFWNFL++YG+R
Sbjct: 113 SSGVAER----LFSCCEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFR 168

Query: 71  YGEGKSRILLPCEVLEILNKFSE 3
           YG+  +R LLPCEVLE+L +  +
Sbjct: 169 YGDDITRTLLPCEVLEMLRRIPQ 191


>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
          Length = 2017

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/144 (54%), Positives = 100/144 (69%), Gaps = 1/144 (0%)
 Frame = -3

Query: 431 PLESGKCESCGTAEPGKCDGHFGYIEFPIKIYHPCHVSELKRLLSTVCLKCLRLKRTKIR 252
           PLE+GKCESCG +E GKC+GHFGYIE P+ IYHPCHV+EL+++L+ VCLKCLR+K+ K++
Sbjct: 52  PLETGKCESCGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVK 111

Query: 251 QNVGSDRPSNIPCSFCLDIPQILVNEFKTTDGVVFLELKVVTRSIPHNGFWNFLDKYGYR 72
           Q  G D  S + C +C D+P + + E KT DG   LELK+  R     G WNFLDKYG+ 
Sbjct: 112 QTEGKDNTSALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFH 171

Query: 71  Y-GEGKSRILLPCEVLEILNKFSE 3
           + G    R LLP E L IL K  E
Sbjct: 172 HGGTSHCRTLLPEEALNILKKIPE 195


>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
          Length = 1867

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/144 (54%), Positives = 100/144 (69%), Gaps = 1/144 (0%)
 Frame = -3

Query: 431 PLESGKCESCGTAEPGKCDGHFGYIEFPIKIYHPCHVSELKRLLSTVCLKCLRLKRTKIR 252
           PLE+GKCESCG +E GKC+GHFGYIE P+ IYHPCHV+EL+++L+ VCLKCLR+K+ K++
Sbjct: 52  PLETGKCESCGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVK 111

Query: 251 QNVGSDRPSNIPCSFCLDIPQILVNEFKTTDGVVFLELKVVTRSIPHNGFWNFLDKYGYR 72
           Q  G D  S + C +C D+P + + E KT DG   LELK+  R     G WNFLDKYG+ 
Sbjct: 112 QTEGKDNTSALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFH 171

Query: 71  Y-GEGKSRILLPCEVLEILNKFSE 3
           + G    R LLP E L IL K  E
Sbjct: 172 HGGTSHCRTLLPEEALNILKKIPE 195


>ref|NP_001045921.1| Os02g0152800 [Oryza sativa Japonica Group]
           gi|113535452|dbj|BAF07835.1| Os02g0152800, partial
           [Oryza sativa Japonica Group]
          Length = 488

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/144 (54%), Positives = 100/144 (69%), Gaps = 1/144 (0%)
 Frame = -3

Query: 431 PLESGKCESCGTAEPGKCDGHFGYIEFPIKIYHPCHVSELKRLLSTVCLKCLRLKRTKIR 252
           PLE+GKCESCG +E GKC+GHFGYIE P+ IYHPCHV+EL+++L+ VCLKCLR+K+ K++
Sbjct: 52  PLETGKCESCGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVK 111

Query: 251 QNVGSDRPSNIPCSFCLDIPQILVNEFKTTDGVVFLELKVVTRSIPHNGFWNFLDKYGYR 72
           Q  G D  S + C +C D+P + + E KT DG   LELK+  R     G WNFLDKYG+ 
Sbjct: 112 QTEGKDNTSALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFH 171

Query: 71  Y-GEGKSRILLPCEVLEILNKFSE 3
           + G    R LLP E L IL K  E
Sbjct: 172 HGGTSHCRTLLPEEALNILKKIPE 195