BLASTX nr result

ID: Coptis25_contig00018007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00018007
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526461.1| conserved hypothetical protein [Ricinus comm...   263   2e-68
ref|XP_002263318.1| PREDICTED: ion channel DMI1 [Vitis vinifera]...   263   3e-68
emb|CAN73312.1| hypothetical protein VITISV_012096 [Vitis vinifera]   263   3e-68
ref|XP_003592931.1| DMI1 protein [Medicago truncatula] gi|622865...   258   9e-67
gb|ABX57727.1| SYM8 [Pisum sativum]                                   258   9e-67

>ref|XP_002526461.1| conserved hypothetical protein [Ricinus communis]
            gi|223534241|gb|EEF35956.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 889

 Score =  263 bits (673), Expect = 2e-68
 Identities = 136/161 (84%), Positives = 148/161 (91%), Gaps = 1/161 (0%)
 Frame = -2

Query: 658  SKRLPSKET-STPVRHAVFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 482
            SKRLP ++T S P+R + FSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL
Sbjct: 729  SKRLPYRDTKSMPLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 788

Query: 481  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLYDQEELCFYEIMIRGRQR 302
            SNELVSMALAMVAEDKQINRVLEELF +EGNEMCI+PAEFYL+DQEELCFYEIMIRGRQR
Sbjct: 789  SNELVSMALAMVAEDKQINRVLEELFTKEGNEMCIKPAEFYLFDQEELCFYEIMIRGRQR 848

Query: 301  QEIVIGYRLTDADRAVINPVNKALQRKWSLEDVFVVISLGE 179
             EIVIGYRL  A+RA+INP  K+  +KWSL+DVFVVISLGE
Sbjct: 849  NEIVIGYRLATAERAIINPPEKSKLKKWSLDDVFVVISLGE 889


>ref|XP_002263318.1| PREDICTED: ion channel DMI1 [Vitis vinifera]
            gi|297739532|emb|CBI29714.3| unnamed protein product
            [Vitis vinifera]
          Length = 818

 Score =  263 bits (671), Expect = 3e-68
 Identities = 135/159 (84%), Positives = 147/159 (92%), Gaps = 1/159 (0%)
 Frame = -2

Query: 658  SKRLPSKET-STPVRHAVFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 482
            SKRLP ++T S   RH+ FSHSSWI EMQQASDKSIIISEILDSRTRNLVSVSRISDYVL
Sbjct: 660  SKRLPDRDTKSAASRHSGFSHSSWICEMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 719

Query: 481  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLYDQEELCFYEIMIRGRQR 302
            SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYL+DQEELCFYEIMIRGRQR
Sbjct: 720  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLFDQEELCFYEIMIRGRQR 779

Query: 301  QEIVIGYRLTDADRAVINPVNKALQRKWSLEDVFVVISL 185
            +EIVIGYRL   +RA+INP +K+ +RKWS+EDVFVVIS+
Sbjct: 780  REIVIGYRLATTERAIINPPDKSKRRKWSIEDVFVVISI 818


>emb|CAN73312.1| hypothetical protein VITISV_012096 [Vitis vinifera]
          Length = 1817

 Score =  263 bits (671), Expect = 3e-68
 Identities = 135/159 (84%), Positives = 147/159 (92%), Gaps = 1/159 (0%)
 Frame = -2

Query: 658  SKRLPSKET-STPVRHAVFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 482
            SKRLP ++T S   RH+ FSHSSWI EMQQASDKSIIISEILDSRTRNLVSVSRISDYVL
Sbjct: 1659 SKRLPDRDTKSAASRHSGFSHSSWICEMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 1718

Query: 481  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLYDQEELCFYEIMIRGRQR 302
            SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYL+DQEELCFYEIMIRGRQR
Sbjct: 1719 SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLFDQEELCFYEIMIRGRQR 1778

Query: 301  QEIVIGYRLTDADRAVINPVNKALQRKWSLEDVFVVISL 185
            +EIVIGYRL   +RA+INP +K+ +RKWS+EDVFVVIS+
Sbjct: 1779 REIVIGYRLATTERAIINPPDKSKRRKWSIEDVFVVISI 1817


>ref|XP_003592931.1| DMI1 protein [Medicago truncatula] gi|62286545|sp|Q6RHR6.1|DMI1_MEDTR
            RecName: Full=Ion channel DMI1; AltName: Full=Does not
            make infections protein 1 gi|44953222|gb|AAS49490.1| DMI1
            protein [Medicago truncatula] gi|92870250|gb|ABE79577.1|
            Ion channel DMI-1 , putative [Medicago truncatula]
            gi|355481979|gb|AES63182.1| DMI1 protein [Medicago
            truncatula] gi|357394659|gb|AET75788.1| DMI1 [Cloning
            vector pHUGE-MtNFS] gi|357394672|gb|AET75800.1| DMI1
            [Cloning vector pHUGE-LjMtNFS]
          Length = 882

 Score =  258 bits (658), Expect = 9e-67
 Identities = 131/161 (81%), Positives = 149/161 (92%), Gaps = 1/161 (0%)
 Frame = -2

Query: 658  SKRLPSKET-STPVRHAVFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 482
            S+RLP ++T ST +R + FSH+SWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL
Sbjct: 722  SRRLPYRDTKSTSLRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 781

Query: 481  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLYDQEELCFYEIMIRGRQR 302
            SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCI+PAEFYL+DQEELCFY+IMIRGR R
Sbjct: 782  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTR 841

Query: 301  QEIVIGYRLTDADRAVINPVNKALQRKWSLEDVFVVISLGE 179
            +EIVIGYRL + +RA+INP  K++ RKWSL+DVFVV++ GE
Sbjct: 842  KEIVIGYRLANQERAIINPSEKSVPRKWSLDDVFVVLASGE 882


>gb|ABX57727.1| SYM8 [Pisum sativum]
          Length = 894

 Score =  258 bits (658), Expect = 9e-67
 Identities = 132/161 (81%), Positives = 148/161 (91%), Gaps = 1/161 (0%)
 Frame = -2

Query: 658  SKRLPSKET-STPVRHAVFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 482
            S+RLP ++T ST +R + FSH+SWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL
Sbjct: 734  SRRLPYRDTKSTSLRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVL 793

Query: 481  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRPAEFYLYDQEELCFYEIMIRGRQR 302
            SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCI+PAEFYL+DQEELCFY+IMIRGR R
Sbjct: 794  SNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTR 853

Query: 301  QEIVIGYRLTDADRAVINPVNKALQRKWSLEDVFVVISLGE 179
            +EIVIGYRL   +RA+INP  K++ RKWSL+DVFVVI+ GE
Sbjct: 854  KEIVIGYRLASQERALINPSEKSMTRKWSLDDVFVVIASGE 894


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