BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017996
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]   238   2e-60
ref|XP_003620138.1| Mitochondrial protein, putative [Medicago tr...   172   1e-40
ref|XP_002464448.1| hypothetical protein SORBIDRAFT_01g018570 [S...   164   4e-38
ref|XP_002447225.1| hypothetical protein SORBIDRAFT_06g030850 [S...   162   2e-37
gb|ACG24194.1| CDT1a protein [Zea mays]                               159   2e-36

>emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]
          Length = 516

 Score =  238 bits (608), Expect = 2e-60
 Identities = 149/310 (48%), Positives = 183/310 (59%), Gaps = 42/310 (13%)
 Frame = -2

Query: 936  KVELPEKYKILAEFFDRIYTSTRLLSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYV 757
            ++ LP+KYK +AEFFDR+  S RLL L KK  TFQNICT V+++TKR  SY HLAQ+KY+
Sbjct: 150  EINLPDKYKTIAEFFDRMNCSLRLLGLRKKPTTFQNICTQVEILTKRKFSYRHLAQIKYI 209

Query: 756  FPEAIQIE---IHS-QDLCMTPDMKITLLFDVVEVHPNQSPFKALRQVFHERLLDFFKIH 589
             PE +Q +   IH  + LCM PDMKI+LLFDV+E H  +S F ALRQVF  RLLDFF  H
Sbjct: 210  LPEVVQXDYILIHDVKSLCMKPDMKISLLFDVIEGHQEKSTFMALRQVFAYRLLDFFNXH 269

Query: 588  SESRDIPEAMLPEPFSQRNHTALPWSMSPNFLLKSHTAPIECEPLLVSS-LGQSIRKHFS 412
             E  DIPEA+LPEPF+QR    +P S+  +  ++S     E E L  SS L  S R+ FS
Sbjct: 270  PEGCDIPEAILPEPFNQRTQNIIPKSLPVDSSIESQPTS-EVELLABSSHLNPSFRRQFS 328

Query: 411  QKIAVPETEKTELLASAVPPFSH---------------------------------ILCP 331
            +K  V ET K +LLAS VP  S                                  ++CP
Sbjct: 329  EKAVVAETGKXQLLASLVPLLSSSSDIVTNKXIKSXQHKESSELYSESTIIKPPVGLICP 388

Query: 330  QSS-NSSATESPLVKLAQHPHALTVETPAQPTPAKRFFPSSDEKVHTETRVLG---HATA 163
            QSS +SSA ESP +K       L VETPAQ TP KR  PS D K+ T TR +G   H   
Sbjct: 389  QSSVSSSACESPYLKHRMVSDCLMVETPAQLTP-KRSMPSCDNKLKTVTRQMGTSCHMPT 447

Query: 162  KKSLDFSSIE 133
            K+SLDFS +E
Sbjct: 448  KRSLDFSRLE 457


>ref|XP_003620138.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355495153|gb|AES76356.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 622

 Score =  172 bits (437), Expect = 1e-40
 Identities = 123/356 (34%), Positives = 178/356 (50%), Gaps = 46/356 (12%)
 Frame = -2

Query: 1059 KQLSKAYQNANDAIE--------DETVEPPNSIAENEQVQVSDAITEVGKVELPEKYKIL 904
            K   K+ +N++D +         D+++  P    + E +  ++   +    +LPEKYK +
Sbjct: 4    KPCDKSVKNSSDFMSEKKILHSVDKSIACPTPEKKTEPLLATNL--KDSNTQLPEKYKNI 61

Query: 903  AEFFDRIYTSTRLLSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE--- 733
             + F  +  + RLL L KK PTFQNIC  V+V+ KR  SY HLAQMKY+ P+ I+IE   
Sbjct: 62   GDLFSDMSCALRLLHLRKKSPTFQNICNKVEVLAKRNFSYAHLAQMKYILPKGIEIEKVV 121

Query: 732  -IHSQDLCMTPDMKITLLFDVVEVHPNQSPFKALRQVFHERLLDFFKIHSESRDIPEAML 556
             +  + LCM PD+KITL+FDVVE H  QS   AL + F+ +L++FF +H E  DIPEA L
Sbjct: 122  VVDKKSLCMKPDLKITLVFDVVEDHSEQSADLALIRYFNSKLINFFNLHPEVTDIPEAAL 181

Query: 555  PEPFSQRNHTALPWSMSPNFLLKSHTAPIECEPLLVS-SLGQSIRKHFSQKIAVPETEKT 379
            PEPFSQR +  +    + N   +  +   E E  L +  L  S ++HFSQK    ETE  
Sbjct: 182  PEPFSQRPYNLIFKDGTVNLSKELSSTSNEIELSLNNLHLSPSFKRHFSQKNVANETELV 241

Query: 378  ELLASAVPPF-----------------SHILCPQSS-------------NSSATESPLVK 289
            +  +S+                     S  +C Q +             + S  ESP +K
Sbjct: 242  QSFSSSENSMSSHESDCNNVERGKQKESQSMCIQQNVINTPVHKIYHPHSVSRIESPDLK 301

Query: 288  LAQHPHALTVETPAQPTPAKRFFPSSDEKVHTETRVLGHA---TAKKSLDFSSIEG 130
            +     +L   TPAQ  P +R    SD K+   T     +    AK+ LDF+  EG
Sbjct: 302  IVSCTDSLLTHTPAQSAP-ERLLLGSDVKLQKMTAQKSGSCFKPAKRVLDFTLTEG 356


>ref|XP_002464448.1| hypothetical protein SORBIDRAFT_01g018570 [Sorghum bicolor]
            gi|241918302|gb|EER91446.1| hypothetical protein
            SORBIDRAFT_01g018570 [Sorghum bicolor]
          Length = 561

 Score =  164 bits (415), Expect = 4e-38
 Identities = 150/417 (35%), Positives = 205/417 (49%), Gaps = 59/417 (14%)
 Frame = -2

Query: 1191 DIASSPAS-----IQSQDFVCSFASPTPEKTAHSSRSKNQRTALPVRALKQLSKAYQN-- 1033
            D +SSPA+     + ++D      SPTPEK    SRSK    +   R L  L++ Y++  
Sbjct: 22   DDSSSPATMHKMKVDTEDAGIKIESPTPEKL--ESRSKGVVVSSLARNL--LAERYKDRF 77

Query: 1032 ANDAIEDETVEPPNSIAENEQVQVSDAITEVGKVELPEKYKILAEFFDRIYTSTRLLSLH 853
            AN  +EDE         ++    VS +      +EL EK+K L   F+R+ +S RLL L 
Sbjct: 78   ANQFVEDEGDTDDEDYNDSILPGVSRSHMS-RSIELFEKHKDLLNLFNRMESSIRLLHLR 136

Query: 852  KKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHSQ-DLCMTPDMKITL 685
            K++ TF NI   V+++TKR LSY+HLAQMK++FPEAIQI+   +H +  LCM  DM+I L
Sbjct: 137  KRMATFSNIAAQVEILTKRKLSYSHLAQMKHLFPEAIQIKRILLHDEKSLCMYADMEIIL 196

Query: 684  LFDVVE-VHPNQSPFKALRQVFHERLLDFFKIHSESRDIPEAMLPEPFSQRNHTALPWSM 508
            + DVVE   P+QSP  A+ + F+ +LL F   H +  DIPEA LPEPF+ R+   L    
Sbjct: 197  VMDVVECTSPDQSPSMAICEAFYSKLLRFLDTHHKGTDIPEATLPEPFNSRSKGQL---- 252

Query: 507  SPNFLLKSHTAPIECEPLL----------VSSLGQSIRKHFSQKIAVPETEKTELL---- 370
               FL  SH      EP L           S   QS RK  SQK+     EKT+LL    
Sbjct: 253  ---FLEASHNGH-AAEPHLQGTTEDGFSNASHFPQSFRKLMSQKVITDGAEKTQLLPDPT 308

Query: 369  --------------ASAVPPFSHILCPQSSNSSATES-----------PLVKLAQHPHAL 265
                           S +    H     +S  SAT S           P  + ++ P  L
Sbjct: 309  KLSSVSAYDMEGTNRSPIKQDKHASFTVNSEISATPSRHLISCCQEGTPKQETSESP--L 366

Query: 264  TVETPAQPTPAKRFFPSSDEKVHTETRVLGH-------ATAKKSLDFS-SIEGVSSS 118
             V+TPA  TP KR  P+  EK+       GH       ++A++SL+ S   EG S S
Sbjct: 367  LVQTPAMQTP-KRPLPTPLEKLEA---TCGHISEPRSASSARRSLNTSLKFEGGSPS 419


>ref|XP_002447225.1| hypothetical protein SORBIDRAFT_06g030850 [Sorghum bicolor]
            gi|241938408|gb|EES11553.1| hypothetical protein
            SORBIDRAFT_06g030850 [Sorghum bicolor]
          Length = 562

 Score =  162 bits (409), Expect = 2e-37
 Identities = 149/446 (33%), Positives = 213/446 (47%), Gaps = 54/446 (12%)
 Frame = -2

Query: 1185 ASSPASI-----QSQDFVCSFASPTPEKTAHSSRSKNQRTALPVRALKQLSKAYQN--AN 1027
            +SSPA++     +++D      SPTPEK    SRSK    +   R L  L++ Y++  A 
Sbjct: 24   SSSPATVHKMKAETEDGGSEIESPTPEK--RESRSKGVVVSSLARNL--LAERYKDRFAY 79

Query: 1026 DAIEDETVEPPNSIAENEQVQVSDAITEVGK-------VELPEKYKILAEFFDRIYTSTR 868
              +EDE         E ++   +++++  G        +EL EK+K L   F+R+ +S R
Sbjct: 80   QLVEDE--------GETDEEDYNESVSPSGSRSLFPESIELLEKHKDLLNLFNRMESSIR 131

Query: 867  LLSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHSQ-DLCMTPD 700
            LL L KK+ TF NI T V+++ KR L Y+HLAQMK++FPEAIQI+   +H +  LCM  D
Sbjct: 132  LLHLRKKMATFNNIATQVEILAKRKLLYSHLAQMKHLFPEAIQIKRILVHDEKSLCMYAD 191

Query: 699  MKITLLFDVVE-VHPNQSPFKALRQVFHERLLDFFKIHSESRDIPEAMLPEPFSQRNHTA 523
            M+ITL+ DVVE   P+QSP   + + F+ +LL F   H +  DIPEA+LPEPF+ R    
Sbjct: 192  MEITLVMDVVECTSPDQSPSMTICEAFYSKLLRFLDAHHKGADIPEAILPEPFNSRPRDK 251

Query: 522  LPWSMSPNFLLKSHTA------PIECEPLLVSSLGQSIRKHFSQKIAVPETEKTELLA-- 367
            L      N     H A        E E    S   QS +K  SQKI    TEKT+LL+  
Sbjct: 252  LYLEAVHN----GHAAEPPMQGAAEEELSNASHFPQSFQKLMSQKIIADGTEKTQLLSDP 307

Query: 366  ---SAVPPF-------------SHILCPQSSNSSATES---------PLVKLAQHPHALT 262
               S+V  +              H   P +S  SAT S            K       L 
Sbjct: 308  AELSSVNVYDTEGSDRNPKKQDEHAPAPVNSEISATPSRHLTSCCQESTPKQGTSESPLL 367

Query: 261  VETPAQPTPAKRFFPSSDEKVHTETRVLGHATAKKSLDFSSIEGVSSSVVAE--SRGYLD 88
              TPA  TP  R  P+  EK        GH +  +S   S+   +++S+  E  S  Y D
Sbjct: 368  SGTPAMQTP-NRPLPTPLEKPKV---TCGHISEPRSAS-SARRSLNTSLKFEGGSPSYYD 422

Query: 87   NSIQTALAENNLAYDKVNASPSAFPQ 10
                T  AE  +  +  ++   +F +
Sbjct: 423  GMEHTTTAEKGIISEDSSSFNKSFEE 448


>gb|ACG24194.1| CDT1a protein [Zea mays]
          Length = 561

 Score =  159 bits (401), Expect = 2e-36
 Identities = 151/424 (35%), Positives = 208/424 (49%), Gaps = 59/424 (13%)
 Frame = -2

Query: 1212 VSSDAKKDIASSPAS-----IQSQDFVCSFASPTPEKTAHSSRSKNQRTALPVRALKQLS 1048
            VS+D   D +SSPA+     + ++D      SPTPEK    SRSK    +   R L  L+
Sbjct: 18   VSND---DGSSSPATMHKLKVDTEDAGSKIESPTPEKL--ESRSKGVVVSSLARNL--LA 70

Query: 1047 KAYQN--ANDAIEDETVEPPNSIAENEQVQVSDAITEVGKVELPEKYKILAEFFDRIYTS 874
            + Y++  AN  +EDE         ++    +S +      +EL EK+K L   F+R+ +S
Sbjct: 71   ERYKDRFANQFLEDEGDIDDEDYNDSISPGMSRS-QRSRSIELLEKHKDLLNLFNRMESS 129

Query: 873  TRLLSLHKKLPTFQNICTVVKVITKRILSYNHLAQMKYVFPEAIQIE---IHSQ-DLCMT 706
             RLL L K++ TF NI T V+++ KR LSY HLAQMKY+FPEAIQI+   +H +  LCM 
Sbjct: 130  IRLLRLRKRMATFNNIATQVEILAKRKLSYCHLAQMKYLFPEAIQIKRVLLHDEKSLCMY 189

Query: 705  PDMKITLLFDVVE-VHPNQSPFKALRQVFHERLLDFFKIHSESRDIPEAMLPEPFSQRNH 529
             DM+I L+ DVVE   P+ SP  A+   F+ +LL F   H +  DIPEA+LPEPF+ R+ 
Sbjct: 190  ADMEIILVMDVVEYTSPDHSPSMAICDAFYSKLLTFLDAHHKGTDIPEAILPEPFNLRSR 249

Query: 528  TALPWSMSPNFLLKSHTAPIECEPLL----------VSSLGQSIRKHFSQKIAVPETEKT 379
              L    S N     H A    EP L           S   QS RK  SQK+     E+T
Sbjct: 250  GQLNLEASNN----GHAA----EPHLQGTTKDGFSNASHFPQSFRKLMSQKVITDGAERT 301

Query: 378  ELL-----ASAVPPF-------------SHILCPQSSNSSATES-----------PLVKL 286
            +LL      S+V  +              H     +S  SAT S           P  + 
Sbjct: 302  QLLLDPTKLSSVSAYDTEGTNRSPKKQDKHASVTVNSEISATPSRHLISRCQEGTPKQET 361

Query: 285  AQHPHALTVETPAQPTPAKRFFPSSDEKVHTETRVLGH-------ATAKKSLDFS-SIEG 130
            ++ P  L  +TPA  TP KR  P+  EK+       GH       ++A++SL+ S   EG
Sbjct: 362  SESP--LLAQTPATQTP-KRQLPTPLEKLEA---TCGHISEPRSASSARRSLNTSLKFEG 415

Query: 129  VSSS 118
             S S
Sbjct: 416  GSPS 419