BLASTX nr result
ID: Coptis25_contig00017976
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00017976 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001775243.1| histone H2A [Physcomitrella patens subsp. pa... 68 7e-10 dbj|BAD93602.1| hypothetical protein [Cucumis melo] 67 2e-09 ref|XP_001762476.1| histone H2A [Physcomitrella patens subsp. pa... 65 4e-09 ref|XP_001785216.1| histone H2A [Physcomitrella patens subsp. pa... 65 4e-09 gb|ABK26850.1| unknown [Picea sitchensis] 65 4e-09 >ref|XP_001775243.1| histone H2A [Physcomitrella patens subsp. patens] gi|162673456|gb|EDQ59979.1| histone H2A [Physcomitrella patens subsp. patens] Length = 139 Score = 68.2 bits (165), Expect = 7e-10 Identities = 33/40 (82%), Positives = 34/40 (85%) Frame = +1 Query: 1 RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKGGEKI 120 RND+EL KLL VTIAAGGVLPNIH VLLPKKTDKGG I Sbjct: 92 RNDEELSKLLGTVTIAAGGVLPNIHTVLLPKKTDKGGRDI 131 >dbj|BAD93602.1| hypothetical protein [Cucumis melo] Length = 79 Score = 67.0 bits (162), Expect = 2e-09 Identities = 32/36 (88%), Positives = 35/36 (97%) Frame = +1 Query: 1 RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKG 108 RND+ELGKLLAGVTIA+GGVLPNI+ VLLPKKTDKG Sbjct: 44 RNDEELGKLLAGVTIASGGVLPNINPVLLPKKTDKG 79 >ref|XP_001762476.1| histone H2A [Physcomitrella patens subsp. patens] gi|162686209|gb|EDQ72599.1| histone H2A [Physcomitrella patens subsp. patens] Length = 140 Score = 65.5 bits (158), Expect = 4e-09 Identities = 31/40 (77%), Positives = 34/40 (85%) Frame = +1 Query: 1 RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKGGEKI 120 RND+EL KLL VTIAAGGVLPNIH +LLPKKT KGG+ I Sbjct: 93 RNDEELSKLLGTVTIAAGGVLPNIHTILLPKKTGKGGKDI 132 >ref|XP_001785216.1| histone H2A [Physcomitrella patens subsp. patens] gi|162663178|gb|EDQ49957.1| histone H2A [Physcomitrella patens subsp. patens] Length = 140 Score = 65.5 bits (158), Expect = 4e-09 Identities = 31/40 (77%), Positives = 34/40 (85%) Frame = +1 Query: 1 RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKGGEKI 120 RND+EL KLL VTIAAGGVLPNIH +LLPKKT KGG+ I Sbjct: 93 RNDEELSKLLGTVTIAAGGVLPNIHTILLPKKTGKGGKDI 132 >gb|ABK26850.1| unknown [Picea sitchensis] Length = 141 Score = 65.5 bits (158), Expect = 4e-09 Identities = 30/35 (85%), Positives = 33/35 (94%) Frame = +1 Query: 1 RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDK 105 RND+ELGKL+AGVTIA+GGVLPNIH VLLPKK DK Sbjct: 97 RNDEELGKLMAGVTIASGGVLPNIHQVLLPKKNDK 131