BLASTX nr result

ID: Coptis25_contig00017976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017976
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775243.1| histone H2A [Physcomitrella patens subsp. pa...    68   7e-10
dbj|BAD93602.1| hypothetical protein [Cucumis melo]                    67   2e-09
ref|XP_001762476.1| histone H2A [Physcomitrella patens subsp. pa...    65   4e-09
ref|XP_001785216.1| histone H2A [Physcomitrella patens subsp. pa...    65   4e-09
gb|ABK26850.1| unknown [Picea sitchensis]                              65   4e-09

>ref|XP_001775243.1| histone H2A [Physcomitrella patens subsp. patens]
           gi|162673456|gb|EDQ59979.1| histone H2A [Physcomitrella
           patens subsp. patens]
          Length = 139

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +1

Query: 1   RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKGGEKI 120
           RND+EL KLL  VTIAAGGVLPNIH VLLPKKTDKGG  I
Sbjct: 92  RNDEELSKLLGTVTIAAGGVLPNIHTVLLPKKTDKGGRDI 131


>dbj|BAD93602.1| hypothetical protein [Cucumis melo]
          Length = 79

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = +1

Query: 1   RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKG 108
           RND+ELGKLLAGVTIA+GGVLPNI+ VLLPKKTDKG
Sbjct: 44  RNDEELGKLLAGVTIASGGVLPNINPVLLPKKTDKG 79


>ref|XP_001762476.1| histone H2A [Physcomitrella patens subsp. patens]
           gi|162686209|gb|EDQ72599.1| histone H2A [Physcomitrella
           patens subsp. patens]
          Length = 140

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +1

Query: 1   RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKGGEKI 120
           RND+EL KLL  VTIAAGGVLPNIH +LLPKKT KGG+ I
Sbjct: 93  RNDEELSKLLGTVTIAAGGVLPNIHTILLPKKTGKGGKDI 132


>ref|XP_001785216.1| histone H2A [Physcomitrella patens subsp. patens]
           gi|162663178|gb|EDQ49957.1| histone H2A [Physcomitrella
           patens subsp. patens]
          Length = 140

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +1

Query: 1   RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDKGGEKI 120
           RND+EL KLL  VTIAAGGVLPNIH +LLPKKT KGG+ I
Sbjct: 93  RNDEELSKLLGTVTIAAGGVLPNIHTILLPKKTGKGGKDI 132


>gb|ABK26850.1| unknown [Picea sitchensis]
          Length = 141

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   RNDDELGKLLAGVTIAAGGVLPNIHNVLLPKKTDK 105
           RND+ELGKL+AGVTIA+GGVLPNIH VLLPKK DK
Sbjct: 97  RNDEELGKLMAGVTIASGGVLPNIHQVLLPKKNDK 131


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