BLASTX nr result

ID: Coptis25_contig00017971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017971
         (1337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36923.3| unnamed protein product [Vitis vinifera]              535   e-149
ref|XP_002275035.1| PREDICTED: phosphoribosylformylglycinamidine...   535   e-149
gb|AAR06290.1| 5'-aminoimidazole ribonucleotide synthetase [Sola...   533   e-149
ref|XP_002278175.2| PREDICTED: LOW QUALITY PROTEIN: phosphoribos...   528   e-147
ref|XP_002515311.1| phosphoribosylamine-glycine ligase, putative...   522   e-146

>emb|CBI36923.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  535 bits (1378), Expect = e-149
 Identities = 277/374 (74%), Positives = 309/374 (82%), Gaps = 8/374 (2%)
 Frame = +3

Query: 84   YICKSPK--FQSFLKISSLTPGKLRLKREAASLVMNVKSGDDDGQS------MTYKDAGV 239
            Y CK  K  F     +  +  GK+  +R   + +++  S ++ G+S      +TYKDAGV
Sbjct: 83   YPCKGTKNCFSKRFSLLRMAAGKVAARRTRNTSLISSMSKNNYGESADMADSLTYKDAGV 142

Query: 240  DIDAGSELVKRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLKLAFETGIHDTIGIDL 419
            DIDAGSELVKRIAKMA             DSYLVAGTDGVGTKLKLAFETGIH+TIGIDL
Sbjct: 143  DIDAGSELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHETIGIDL 202

Query: 420  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPD 599
            VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQ DC LLGGETAEMPD
Sbjct: 203  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPD 262

Query: 600  FYADGEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLS 779
            FYADGEYDLSGFAVG V K+SVIDGKNIV GDVL+GL SSGVHSNGFSLVRRVL+RSGLS
Sbjct: 263  FYADGEYDLSGFAVGVVKKDSVIDGKNIVPGDVLIGLLSSGVHSNGFSLVRRVLSRSGLS 322

Query: 780  LKNQLPGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLG 959
            LK+QLPG  ITLGEALMAPT+IYVKQVLD ISKGGVKGIAHITGGG TDNIPR+FPKGLG
Sbjct: 323  LKDQLPGEAITLGEALMAPTVIYVKQVLDFISKGGVKGIAHITGGGFTDNIPRVFPKGLG 382

Query: 960  AAIHQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVA 1139
            A I++DSW VP++FKWIQEAG++ED EMRRTFN+GIGMVLVV+PEA++RILG+ +    A
Sbjct: 383  AVIYKDSWEVPSVFKWIQEAGQIEDAEMRRTFNMGIGMVLVVSPEASLRILGDGNGAYTA 442

Query: 1140 YRIGEVVSGGGVTY 1181
            Y+IGEV  G GV Y
Sbjct: 443  YKIGEVAVGEGVRY 456


>ref|XP_002275035.1| PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|147859594|emb|CAN83527.1| hypothetical protein
            VITISV_002057 [Vitis vinifera]
          Length = 406

 Score =  535 bits (1378), Expect = e-149
 Identities = 277/374 (74%), Positives = 309/374 (82%), Gaps = 8/374 (2%)
 Frame = +3

Query: 84   YICKSPK--FQSFLKISSLTPGKLRLKREAASLVMNVKSGDDDGQS------MTYKDAGV 239
            Y CK  K  F     +  +  GK+  +R   + +++  S ++ G+S      +TYKDAGV
Sbjct: 32   YPCKGTKNCFSKRFSLLRMAAGKVAARRTRNTSLISSMSKNNYGESADMADSLTYKDAGV 91

Query: 240  DIDAGSELVKRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLKLAFETGIHDTIGIDL 419
            DIDAGSELVKRIAKMA             DSYLVAGTDGVGTKLKLAFETGIH+TIGIDL
Sbjct: 92   DIDAGSELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHETIGIDL 151

Query: 420  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPD 599
            VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQ DC LLGGETAEMPD
Sbjct: 152  VAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPD 211

Query: 600  FYADGEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLS 779
            FYADGEYDLSGFAVG V K+SVIDGKNIV GDVL+GL SSGVHSNGFSLVRRVL+RSGLS
Sbjct: 212  FYADGEYDLSGFAVGVVKKDSVIDGKNIVPGDVLIGLLSSGVHSNGFSLVRRVLSRSGLS 271

Query: 780  LKNQLPGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLG 959
            LK+QLPG  ITLGEALMAPT+IYVKQVLD ISKGGVKGIAHITGGG TDNIPR+FPKGLG
Sbjct: 272  LKDQLPGEAITLGEALMAPTVIYVKQVLDFISKGGVKGIAHITGGGFTDNIPRVFPKGLG 331

Query: 960  AAIHQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVA 1139
            A I++DSW VP++FKWIQEAG++ED EMRRTFN+GIGMVLVV+PEA++RILG+ +    A
Sbjct: 332  AVIYKDSWEVPSVFKWIQEAGQIEDAEMRRTFNMGIGMVLVVSPEASLRILGDGNGAYTA 391

Query: 1140 YRIGEVVSGGGVTY 1181
            Y+IGEV  G GV Y
Sbjct: 392  YKIGEVAVGEGVRY 405


>gb|AAR06290.1| 5'-aminoimidazole ribonucleotide synthetase [Solanum tuberosum]
          Length = 404

 Score =  533 bits (1373), Expect = e-149
 Identities = 275/369 (74%), Positives = 303/369 (82%), Gaps = 8/369 (2%)
 Frame = +3

Query: 99   PKFQSFLK--------ISSLTPGKLRLKREAASLVMNVKSGDDDGQSMTYKDAGVDIDAG 254
            PK Q F K        I++ +  +  +          V +  D+  S+TYKDAGVDIDAG
Sbjct: 35   PKLQDFSKKLLPLCKDINARSNRERSIPYSVTCSASQVDTAADEPSSLTYKDAGVDIDAG 94

Query: 255  SELVKRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSV 434
            SELVKRIAKMA             DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSV
Sbjct: 95   SELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSV 154

Query: 435  NDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPDFYADG 614
            NDIVTSGAKPLFFLDYFATS LDVDLAEKVIKGIVDGCQQ DCALLGGETAEMPDFYA+G
Sbjct: 155  NDIVTSGAKPLFFLDYFATSRLDVDLAEKVIKGIVDGCQQSDCALLGGETAEMPDFYAEG 214

Query: 615  EYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLSLKNQL 794
            EYDLSGFAVG V K+SVIDGKNI  GDVL+GLPSSGVHSNGFSLVRRVL +SGLSLK+QL
Sbjct: 215  EYDLSGFAVGIVKKDSVIDGKNIKVGDVLIGLPSSGVHSNGFSLVRRVLKQSGLSLKDQL 274

Query: 795  PGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHITGGGLTDNIPRIFPKGLGAAIHQ 974
            PG +ITLGEAL+APT+IYVKQVLDIISKGGVKGIAHITGGG TDNIPR+FPKGLGA I++
Sbjct: 275  PGESITLGEALIAPTVIYVKQVLDIISKGGVKGIAHITGGGFTDNIPRVFPKGLGALIYE 334

Query: 975  DSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVAYRIGE 1154
             SW +P +FKWIQEAGR+ED EM RTFN+G+GMVLVV+PEAA RIL E  K ++AYRIGE
Sbjct: 335  GSWTIPPVFKWIQEAGRIEDAEMMRTFNMGVGMVLVVSPEAADRILMEVQKTSIAYRIGE 394

Query: 1155 VVSGGGVTY 1181
            VV G GV+Y
Sbjct: 395  VVKGDGVSY 403


>ref|XP_002278175.2| PREDICTED: LOW QUALITY PROTEIN: phosphoribosylformylglycinamidine
            cyclo-ligase, chloroplastic/mitochondrial-like [Vitis
            vinifera]
          Length = 407

 Score =  528 bits (1359), Expect = e-147
 Identities = 278/371 (74%), Positives = 311/371 (83%), Gaps = 7/371 (1%)
 Frame = +3

Query: 90   CKSPKFQSFLKISSLTPGKLRLKREAASLVMNVKSGDDDGQS------MTYKDAGVDIDA 251
            C S +F S L++++   G++R +R   + +++  S ++ G+S      +TYKDAGVDIDA
Sbjct: 40   CFSKRF-SLLRMAA---GEVRPRRPRNTSLISSMSKNNYGESADMADSLTYKDAGVDIDA 95

Query: 252  GSELVKRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMS 431
            GSELVKRIAKMA             DSYLVAGTDGVGTKLKLAFETGIH+TIGIDLVAMS
Sbjct: 96   GSELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHETIGIDLVAMS 155

Query: 432  VNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQCDCALLGGETAEMPDFYAD 611
            VNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQ DC LLGGETAEMPDFYAD
Sbjct: 156  VNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAD 215

Query: 612  GEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGVHSNGFSLVRRVLARSGLSLKNQ 791
            GEYDLSGFAVG V K+SVIDGK IV GDVL+GLPSSGVHSNGFSLVRRVL++SGLSLK Q
Sbjct: 216  GEYDLSGFAVGVVKKDSVIDGKTIVPGDVLIGLPSSGVHSNGFSLVRRVLSKSGLSLKGQ 275

Query: 792  LPGATITLGEALMAPTIIYVKQVLDIISK-GGVKGIAHITGGGLTDNIPRIFPKGLGAAI 968
            LPG  ITLGEALMAPTIIYVKQVLD ISK GGVKGIAHITGGG TDNIPR+FPKGLGA I
Sbjct: 276  LPGEAITLGEALMAPTIIYVKQVLDFISKEGGVKGIAHITGGGFTDNIPRVFPKGLGAVI 335

Query: 969  HQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVVTPEAAVRILGECHKRNVAYRI 1148
            ++DSW VP++FKWIQEAGR+ED EMRRTFN+GIGMVLVV+PEA+ RILG+ +    AY+I
Sbjct: 336  YKDSWEVPSVFKWIQEAGRIEDAEMRRTFNMGIGMVLVVSPEASSRILGDGNGAYTAYKI 395

Query: 1149 GEVVSGGGVTY 1181
            GEV S  GV Y
Sbjct: 396  GEVASDEGVRY 406


>ref|XP_002515311.1| phosphoribosylamine-glycine ligase, putative [Ricinus communis]
            gi|223545791|gb|EEF47295.1| phosphoribosylamine-glycine
            ligase, putative [Ricinus communis]
          Length = 394

 Score =  522 bits (1345), Expect = e-146
 Identities = 276/392 (70%), Positives = 315/392 (80%), Gaps = 6/392 (1%)
 Frame = +3

Query: 24   NMETSLTLKTNTFNSLKQPHYICKSPKFQSFLKISSLTPGKLRLKREAASLVMNV----- 188
            N E S  L  +T +S  +  +  K  +  S  ++S   P  L +   A S ++++     
Sbjct: 8    NTELSRALAASTISSSVRLKF--KPARHSSMNRLSYRFP-LLSVSAAAKSSIVSMSKEGD 64

Query: 189  -KSGDDDGQSMTYKDAGVDIDAGSELVKRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGT 365
             KSGD  G  +TYKD GVDIDAGSELVKRIAKMA             DSYLVAGTDGVGT
Sbjct: 65   SKSGDGSG-GLTYKDTGVDIDAGSELVKRIAKMAPGIGGFGGLYPLGDSYLVAGTDGVGT 123

Query: 366  KLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLDVDLAEKVIKGIVDG 545
            KLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLD+DLAEKVIKGIVDG
Sbjct: 124  KLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLDLDLAEKVIKGIVDG 183

Query: 546  CQQCDCALLGGETAEMPDFYADGEYDLSGFAVGSVGKNSVIDGKNIVAGDVLLGLPSSGV 725
            CQQ DC LLGGETAEMPDFYADGEYDLSGFAVG V K+SVIDGKNIVAGDV++GLPS+GV
Sbjct: 184  CQQSDCTLLGGETAEMPDFYADGEYDLSGFAVGIVKKDSVIDGKNIVAGDVIIGLPSNGV 243

Query: 726  HSNGFSLVRRVLARSGLSLKNQLPGATITLGEALMAPTIIYVKQVLDIISKGGVKGIAHI 905
            HSNGFSLVRRVLARSGLSL +QLPG  I +GEALMAPT+IYVKQVLD+I+KGGVKGIAHI
Sbjct: 244  HSNGFSLVRRVLARSGLSLNDQLPGEGIAVGEALMAPTVIYVKQVLDLINKGGVKGIAHI 303

Query: 906  TGGGLTDNIPRIFPKGLGAAIHQDSWNVPALFKWIQEAGRVEDVEMRRTFNLGIGMVLVV 1085
            TGGG TDNIPR+FPKGLGA IH++SW VPA+FKWIQE G++ED EMRRTFN+GIGMVL+V
Sbjct: 304  TGGGFTDNIPRVFPKGLGAVIHKNSWEVPAVFKWIQEVGKIEDAEMRRTFNMGIGMVLIV 363

Query: 1086 TPEAAVRILGECHKRNVAYRIGEVVSGGGVTY 1181
              +A+ ++L + H +  AY+IGEVVS  GV+Y
Sbjct: 364  NEDASRKVLEDGHCK--AYQIGEVVSSEGVSY 393


Top