BLASTX nr result
ID: Coptis25_contig00017969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00017969
(636 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265340.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA... 234 8e-60
ref|XP_002297858.1| predicted protein [Populus trichocarpa] gi|2... 224 8e-57
ref|XP_002514862.1| Delta3,5-delta2,4-dienoyl-CoA isomerase, mit... 222 4e-56
ref|NP_199142.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [... 219 4e-55
ref|NP_001078698.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase ... 219 4e-55
>ref|XP_002265340.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
mitochondrial [Vitis vinifera]
gi|296088718|emb|CBI38168.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 234 bits (598), Expect = 8e-60
Identities = 122/180 (67%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Frame = -2
Query: 539 MAEYKCLQIIQSTPNSSVFYLYLNRPSLKNALSGDFFIEFPKALSSLDQNPNVRVIILAG 360
M YK L+I+Q +P SSVF+L LNRPSL+NALS DFF EFPKAL SLDQNPNV VIIL+G
Sbjct: 1 MENYKTLEIVQRSPKSSVFHLNLNRPSLRNALSLDFFSEFPKALDSLDQNPNVSVIILSG 60
Query: 359 QGTHFCSGIDLKTLNSIT-NSQTNDQGRVRERVRREIKGLQDAISAIEKCRKPVIVSVHX 183
G HFCSGIDLK L+SI+ SQ++D+GR ER+RR IK LQDAI+AIE CRKPVI +H
Sbjct: 61 NGAHFCSGIDLKVLDSISERSQSSDRGRTGERLRRHIKFLQDAITAIEHCRKPVIAGIHG 120
Query: 182 XXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRLPRIVGYGNAIELALTAR 3
IR+CTEDAFF+VKEVDL ITAD+GTLQRLP IVGYGNA+ELALT R
Sbjct: 121 ACIGAGIDVVTACDIRFCTEDAFFSVKEVDLAITADVGTLQRLPSIVGYGNAVELALTGR 180
>ref|XP_002297858.1| predicted protein [Populus trichocarpa] gi|222845116|gb|EEE82663.1|
predicted protein [Populus trichocarpa]
Length = 273
Score = 224 bits (572), Expect = 8e-57
Identities = 116/179 (64%), Positives = 135/179 (75%)
Frame = -2
Query: 539 MAEYKCLQIIQSTPNSSVFYLYLNRPSLKNALSGDFFIEFPKALSSLDQNPNVRVIILAG 360
M YK L + Q +PNS VF L LNRPS +NALS DFF EFP AL SLDQNPN VI+L+G
Sbjct: 1 MEHYKTLHVFQKSPNSGVFQLNLNRPSQRNALSRDFFTEFPIALQSLDQNPNASVIVLSG 60
Query: 359 QGTHFCSGIDLKTLNSITNSQTNDQGRVRERVRREIKGLQDAISAIEKCRKPVIVSVHXX 180
G HFCSGID+KTLNSI N + D+GR ER+RR+IK LQDAI+AIE+CRKPVI ++
Sbjct: 61 TGDHFCSGIDIKTLNSIAN-DSGDRGRSGERLRRDIKFLQDAITAIERCRKPVIAAIKGA 119
Query: 179 XXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRLPRIVGYGNAIELALTAR 3
IRYC+EDAFF+VKEVDLG+TADLGTLQRLP IVG+GNA+ELALT R
Sbjct: 120 CIGGGIDIVTACDIRYCSEDAFFSVKEVDLGLTADLGTLQRLPGIVGFGNAMELALTGR 178
>ref|XP_002514862.1| Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial precursor,
putative [Ricinus communis] gi|223545913|gb|EEF47416.1|
Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial
precursor, putative [Ricinus communis]
Length = 275
Score = 222 bits (566), Expect = 4e-56
Identities = 114/180 (63%), Positives = 136/180 (75%), Gaps = 1/180 (0%)
Frame = -2
Query: 539 MAEYKCLQIIQSTPNSSVFYLYLNRPSLKNALSGDFFIEFPKALSSLDQNPNVRVIILAG 360
M Y+ L+IIQ PNS V +LYLNRP +NALS DFF E P ALS LDQ+PNV VIILAG
Sbjct: 1 MDRYRTLKIIQKIPNSPVVHLYLNRPHQRNALSHDFFTELPNALSCLDQDPNVSVIILAG 60
Query: 359 QGTHFCSGIDLKTLNSIT-NSQTNDQGRVRERVRREIKGLQDAISAIEKCRKPVIVSVHX 183
G HFCSGIDLKT NSIT + + D+GR E++RR+IK LQ+AI+AIEKCRKPVI S+H
Sbjct: 61 AGDHFCSGIDLKTFNSITEQTLSGDRGRANEKLRRQIKYLQEAITAIEKCRKPVIASIHG 120
Query: 182 XXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRLPRIVGYGNAIELALTAR 3
IR+C +D+FF+VKEVDLG+TADLGTLQRLP I+G+GNA+ELALT R
Sbjct: 121 ACIGGGVDIVTACDIRFCCQDSFFSVKEVDLGLTADLGTLQRLPSIIGFGNAMELALTGR 180
>ref|NP_199142.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [Arabidopsis
thaliana] gi|10177390|dbj|BAB10591.1| enoyl CoA
hydratase-like protein [Arabidopsis thaliana]
gi|18252833|gb|AAL62343.1| enoyl CoA hydratase-like
protein [Arabidopsis thaliana]
gi|25084271|gb|AAN72209.1| enoyl CoA hydratase-like
protein [Arabidopsis thaliana]
gi|332007553|gb|AED94936.1|
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
[Arabidopsis thaliana]
Length = 278
Score = 219 bits (557), Expect = 4e-55
Identities = 115/181 (63%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
Frame = -2
Query: 539 MAEYKCLQIIQSTPNSSVFYLYLNRPSLKNALSGDFFIEFPKALSSLDQNPNVRVIILAG 360
M YK L+II+ +SSVF+L +NRPS NALS DFFIEFPKALSSLDQNP+V VIIL+G
Sbjct: 3 MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62
Query: 359 QGTHFCSGIDLKTLNSIT--NSQTNDQGRVRERVRREIKGLQDAISAIEKCRKPVIVSVH 186
G HFCSGIDL +L+SI+ +S ND+GR E++RR+IK +Q AI+AIE+CRKPVI ++H
Sbjct: 63 AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIH 122
Query: 185 XXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRLPRIVGYGNAIELALTA 6
IRYC+EDAFF++KEVDL I ADLGTLQRLP IVGY NA+ELALTA
Sbjct: 123 GACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTA 182
Query: 5 R 3
R
Sbjct: 183 R 183
>ref|NP_001078698.1| delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 [Arabidopsis
thaliana] gi|222423431|dbj|BAH19686.1| AT5G43280
[Arabidopsis thaliana] gi|332007554|gb|AED94937.1|
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1
[Arabidopsis thaliana]
Length = 220
Score = 219 bits (557), Expect = 4e-55
Identities = 115/181 (63%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
Frame = -2
Query: 539 MAEYKCLQIIQSTPNSSVFYLYLNRPSLKNALSGDFFIEFPKALSSLDQNPNVRVIILAG 360
M YK L+II+ +SSVF+L +NRPS NALS DFFIEFPKALSSLDQNP+V VIIL+G
Sbjct: 3 MESYKTLEIIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSG 62
Query: 359 QGTHFCSGIDLKTLNSIT--NSQTNDQGRVRERVRREIKGLQDAISAIEKCRKPVIVSVH 186
G HFCSGIDL +L+SI+ +S ND+GR E++RR+IK +Q AI+AIE+CRKPVI ++H
Sbjct: 63 AGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIH 122
Query: 185 XXXXXXXXXXXXXXXIRYCTEDAFFTVKEVDLGITADLGTLQRLPRIVGYGNAIELALTA 6
IRYC+EDAFF++KEVDL I ADLGTLQRLP IVGY NA+ELALTA
Sbjct: 123 GACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTA 182
Query: 5 R 3
R
Sbjct: 183 R 183