BLASTX nr result

ID: Coptis25_contig00017968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017968
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519957.1| PREDICTED: uncharacterized protein LOC100790...   412   e-112
ref|XP_002314611.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_003517701.1| PREDICTED: uncharacterized protein LOC100791...   404   e-110
ref|XP_002282390.1| PREDICTED: uncharacterized protein LOC100262...   394   e-107
emb|CAN75320.1| hypothetical protein VITISV_003762 [Vitis vinifera]   393   e-107

>ref|XP_003519957.1| PREDICTED: uncharacterized protein LOC100790534 [Glycine max]
          Length = 337

 Score =  412 bits (1059), Expect = e-112
 Identities = 210/338 (62%), Positives = 269/338 (79%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1234 VFPVFLEEXXXXXNQFQDDTTITSKQQLQLFGNLQAGSGLDPVNYVGNEHVSTLRRPMKR 1055
            + PVFL+E      QFQ  T +++  QLQLFGNLQAG  +DPVNY GNEH+S++ +P KR
Sbjct: 10   LLPVFLDET-----QFQHQTNVSN--QLQLFGNLQAGCSVDPVNYFGNEHISSMIQPNKR 62

Query: 1054 CRESEDISSQQKLQISLNNNFYQEEVDRSAFIPNPNPVSTGLRLSYDDDEHNSCMTSTSV 875
             +E EDIS +Q+LQISLN N +Q++ +R A IPNPNPVSTGLRLSYDDDE NS +TS S 
Sbjct: 63   SKEMEDIS-KQRLQISLNYNVHQDDAERLASIPNPNPVSTGLRLSYDDDERNSSVTSASG 121

Query: 874  HGAAHP-FVLSLGDNLRTEINRQKEELDQYIRIQEDHIAKGVREMKQRHMASFLSTIEKG 698
              AA P  +LSLGDN+RTE++RQ+EELDQY+++Q++ ++KGVR+MKQ+HMA+ L++IEKG
Sbjct: 122  SMAATPSIILSLGDNIRTELDRQQEELDQYVKLQKEQLSKGVRDMKQKHMAALLTSIEKG 181

Query: 697  ASKKLREKDLEIENMNRKNRELVERINQVAVEAQSWQYRAKYNESVVNVLKNNLRQAIAQ 518
             S KL+EKD+EIENMNRKNREL ERI QVAVE QSW YRAKYNES+VN L+NNL+QAI+Q
Sbjct: 182  ISTKLKEKDVEIENMNRKNRELAERIKQVAVEVQSWHYRAKYNESIVNTLRNNLQQAISQ 241

Query: 517  GADRLKEGCGDSEVDDAASSIIDQNNPRRIHGGSGNPSYGNHLGSKDQMTCRACKVKEVS 338
            GA++ KEG GDSEVDD A S ID NN   I     N ++ ++    + +TCRACKVK VS
Sbjct: 242  GAEQGKEGFGDSEVDDDA-SYIDPNNFLNILAAPINSTHKSY-QDMENLTCRACKVKTVS 299

Query: 337  VLLLPCRHLCLCNNCEGFVDACPICQSMKSGSVQVYMS 224
            +LL+PCRHLCLC +CEGF++ CPICQ +K+ SV+V++S
Sbjct: 300  MLLMPCRHLCLCKDCEGFINVCPICQLIKTASVEVHLS 337


>ref|XP_002314611.1| predicted protein [Populus trichocarpa] gi|222863651|gb|EEF00782.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  410 bits (1054), Expect = e-112
 Identities = 204/338 (60%), Positives = 255/338 (75%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1234 VFPVFLEEXXXXXNQFQDDTTITSKQQLQLFGNLQAGSGLDPVNYVGNEHVSTLRRPMKR 1055
            + PVF++E               +  QLQLFGNL AG  +DPVNY GNEH + + R  KR
Sbjct: 10   LLPVFMDENHIPYQT-------NASNQLQLFGNLAAGCSIDPVNYFGNEHGTPILRANKR 62

Query: 1054 CRESEDISSQQKLQISLNNNFYQEEVDRSAFIPNPNPVSTGLRLSYDDDEHNSCMTSTSV 875
             RE+ED   QQKLQISLN N  Q+E DRSA IPNPNPVSTGLRLSYDDDEHNS +TS S 
Sbjct: 63   GREAEDFGRQQKLQISLNYNICQDEADRSASIPNPNPVSTGLRLSYDDDEHNSSITSASG 122

Query: 874  HGAAHP-FVLSLGDNLRTEINRQKEELDQYIRIQEDHIAKGVREMKQRHMASFLSTIEKG 698
              +A P  +LSLGDN+RTE++RQ +E DQYI+IQE+H+AKGVR++KQRH +S L+ +EKG
Sbjct: 123  SMSAAPSIILSLGDNIRTELDRQNDEFDQYIKIQEEHLAKGVRDLKQRHFSSLLAAMEKG 182

Query: 697  ASKKLREKDLEIENMNRKNRELVERINQVAVEAQSWQYRAKYNESVVNVLKNNLRQAIAQ 518
             SKKL+EKD EIEN+NRKN+EL+ERI QVA EAQ+W YRAKYNESVVNVLK+NL+QAI+Q
Sbjct: 183  VSKKLQEKDREIENINRKNKELIERIRQVAAEAQNWHYRAKYNESVVNVLKSNLQQAISQ 242

Query: 517  GADRLKEGCGDSEVDDAASSIIDQNNPRRIHGGSGNPSYGNHLGSKDQMTCRACKVKEVS 338
            GAD+ KEG GD+E+DDAA S I+ NN     G    P   N+ G K+ +TCRACK +EVS
Sbjct: 243  GADQGKEGFGDNEIDDAA-SYIEPNNYLNFSGDPAKPLPWNYQGLKEHVTCRACKTREVS 301

Query: 337  VLLLPCRHLCLCNNCEGFVDACPICQSMKSGSVQVYMS 224
            +LL+PCRHLCLC  C+  ++ CP+C+ +K+ S QV++S
Sbjct: 302  MLLMPCRHLCLCKECDALINVCPVCRLIKTNSFQVFLS 339


>ref|XP_003517701.1| PREDICTED: uncharacterized protein LOC100791550 isoform 1 [Glycine
            max] gi|356497710|ref|XP_003517702.1| PREDICTED:
            uncharacterized protein LOC100791550 isoform 2 [Glycine
            max]
          Length = 337

 Score =  404 bits (1039), Expect = e-110
 Identities = 204/338 (60%), Positives = 268/338 (79%), Gaps = 1/338 (0%)
 Frame = -3

Query: 1234 VFPVFLEEXXXXXNQFQDDTTITSKQQLQLFGNLQAGSGLDPVNYVGNEHVSTLRRPMKR 1055
            + PVFL+E      QF+  T +++  QLQLFGNLQAG  +DPVNY GNEH+S++ +P K+
Sbjct: 10   LLPVFLDET-----QFRHQTNVSN--QLQLFGNLQAGCSVDPVNYFGNEHISSMIQPNKQ 62

Query: 1054 CRESEDISSQQKLQISLNNNFYQEEVDRSAFIPNPNPVSTGLRLSYDDDEHNSCMTSTSV 875
             +E EDIS +Q+LQISLN N +Q++ D+ A IPNPNPVSTGLRLSYDDDE NS +TS S 
Sbjct: 63   SKEMEDIS-KQRLQISLNYNVHQDDADQLASIPNPNPVSTGLRLSYDDDERNSSVTSASG 121

Query: 874  HGAAHP-FVLSLGDNLRTEINRQKEELDQYIRIQEDHIAKGVREMKQRHMASFLSTIEKG 698
              +A P  +LS GDN+RTE++RQ+EELDQY+++Q++ ++KGVR+MKQ+H+A+ L++IEKG
Sbjct: 122  SMSATPSIILSFGDNIRTELDRQQEELDQYVKLQKEQLSKGVRDMKQKHVAALLTSIEKG 181

Query: 697  ASKKLREKDLEIENMNRKNRELVERINQVAVEAQSWQYRAKYNESVVNVLKNNLRQAIAQ 518
             + KL+EKD+EIENMNRKNREL ERI QVAVEAQSW YRAKYNESVVN L+NNL+QAI+Q
Sbjct: 182  INTKLKEKDVEIENMNRKNRELAERIKQVAVEAQSWHYRAKYNESVVNTLRNNLQQAISQ 241

Query: 517  GADRLKEGCGDSEVDDAASSIIDQNNPRRIHGGSGNPSYGNHLGSKDQMTCRACKVKEVS 338
            GA++ KEG G+SEVDD A S ID NN   I     N ++ ++    + +TCRACK K VS
Sbjct: 242  GAEQGKEGFGESEVDDDA-SYIDPNNFLNIPAAPINSTHKSY-QDMENLTCRACKTKTVS 299

Query: 337  VLLLPCRHLCLCNNCEGFVDACPICQSMKSGSVQVYMS 224
            +LL+PCRHLCLC +CEGF++ CP+CQ +K+ SV+VY+S
Sbjct: 300  MLLMPCRHLCLCKDCEGFINVCPVCQLIKTASVEVYLS 337


>ref|XP_002282390.1| PREDICTED: uncharacterized protein LOC100262147 [Vitis vinifera]
            gi|297733767|emb|CBI15014.3| unnamed protein product
            [Vitis vinifera]
          Length = 334

 Score =  394 bits (1011), Expect = e-107
 Identities = 207/339 (61%), Positives = 253/339 (74%), Gaps = 2/339 (0%)
 Frame = -3

Query: 1234 VFPVFLEEXXXXXNQFQDDTTITSKQQLQLFGNLQAGSGLDPVNYVGNEHVSTLRRPMKR 1055
            VFPVFLEE      ++Q DT   +  QLQLFG+   G G +P+NY+ N+H + L  P+KR
Sbjct: 10   VFPVFLEEN-----RYQYDTN--AMPQLQLFGDFPVGCGGNPLNYMRNDHANALHGPIKR 62

Query: 1054 CRESEDISSQQKLQISLNNN-FYQEEVDRSAFIPNPNPVSTGLRLSYDDDEHNSCMTSTS 878
             RE+E  S  QKL ISLNNN    +E  +S  I NPNPVSTGL+LSY++DEHNS +TS S
Sbjct: 63   SREAESFSRHQKLHISLNNNNLCHDEAGQSGSILNPNPVSTGLKLSYEEDEHNSSITSAS 122

Query: 877  VH-GAAHPFVLSLGDNLRTEINRQKEELDQYIRIQEDHIAKGVREMKQRHMASFLSTIEK 701
                AA P + SLGDNL++EI+RQKEE D YIR+QE++I KGVRE+KQR   SFLS+IEK
Sbjct: 123  DSMTAALPVISSLGDNLKSEIDRQKEEFDHYIRVQEENIIKGVRELKQRQTVSFLSSIEK 182

Query: 700  GASKKLREKDLEIENMNRKNRELVERINQVAVEAQSWQYRAKYNESVVNVLKNNLRQAIA 521
            G  KKLREK+ EIENMNRKN+ELVER+ QV +E QSW YRAKYNES+VNVLK+NL+Q +A
Sbjct: 183  GVGKKLREKEFEIENMNRKNKELVERVKQVTMEVQSWHYRAKYNESLVNVLKSNLKQVLA 242

Query: 520  QGADRLKEGCGDSEVDDAASSIIDQNNPRRIHGGSGNPSYGNHLGSKDQMTCRACKVKEV 341
            QGA + KEGCGDSEVDDAAS     +    + G SGNP+       K Q+ CRACKV+EV
Sbjct: 243  QGAMQGKEGCGDSEVDDAAS--YTDHIQLGVVGCSGNPT-----SMKKQVNCRACKVREV 295

Query: 340  SVLLLPCRHLCLCNNCEGFVDACPICQSMKSGSVQVYMS 224
            SVLLLPCRHLCLC +CEGF+D CP+C+ MK+ SVQV+MS
Sbjct: 296  SVLLLPCRHLCLCMDCEGFIDVCPVCRVMKTASVQVFMS 334


>emb|CAN75320.1| hypothetical protein VITISV_003762 [Vitis vinifera]
          Length = 360

 Score =  393 bits (1009), Expect = e-107
 Identities = 207/339 (61%), Positives = 252/339 (74%), Gaps = 2/339 (0%)
 Frame = -3

Query: 1234 VFPVFLEEXXXXXNQFQDDTTITSKQQLQLFGNLQAGSGLDPVNYVGNEHVSTLRRPMKR 1055
            VFPVFLEE      ++Q DT   +  QLQLFG+   G G +P+NY+ N+H + L  P+KR
Sbjct: 36   VFPVFLEEN-----RYQYDTN--AMPQLQLFGDFPVGCGGNPLNYMRNDHANALHGPIKR 88

Query: 1054 CRESEDISSQQKLQISLNNN-FYQEEVDRSAFIPNPNPVSTGLRLSYDDDEHNSCMTSTS 878
             RE+E  S  QKL ISLNNN    +E  +S  I NPNPVSTGL+LSY++DEHNS +TS S
Sbjct: 89   SREAESFSRHQKLHISLNNNNLCHDEAGQSGSILNPNPVSTGLKLSYEEDEHNSSITSAS 148

Query: 877  VH-GAAHPFVLSLGDNLRTEINRQKEELDQYIRIQEDHIAKGVREMKQRHMASFLSTIEK 701
                AA P + SLGDNL++EI+RQKEE D YIR+QE++I KGVRE+KQR   SFLS+IEK
Sbjct: 149  DSMTAALPVISSLGDNLKSEIDRQKEEFDHYIRVQEENIIKGVRELKQRQTVSFLSSIEK 208

Query: 700  GASKKLREKDLEIENMNRKNRELVERINQVAVEAQSWQYRAKYNESVVNVLKNNLRQAIA 521
            G  KKLREK+ EIENMNRKN+ELVER+ QV +E QSW YRAKYNES+VNVLK+NL+Q +A
Sbjct: 209  GVGKKLREKEFEIENMNRKNKELVERVKQVTMEVQSWHYRAKYNESLVNVLKSNLKQVLA 268

Query: 520  QGADRLKEGCGDSEVDDAASSIIDQNNPRRIHGGSGNPSYGNHLGSKDQMTCRACKVKEV 341
            QGA + KEGCGDSEVDDAAS     +    + G SGNP+       K Q+ CRACKV+EV
Sbjct: 269  QGAMQGKEGCGDSEVDDAAS--YTDHIQLGVVGCSGNPT-----SMKKQVNCRACKVREV 321

Query: 340  SVLLLPCRHLCLCNNCEGFVDACPICQSMKSGSVQVYMS 224
            SVLLLPCRHLCLC +CEGF+D CP+C  MK+ SVQV+MS
Sbjct: 322  SVLLLPCRHLCLCMDCEGFIDVCPVCXVMKTASVQVFMS 360


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