BLASTX nr result

ID: Coptis25_contig00017964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017964
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274100.1| PREDICTED: syntaxin-22 [Vitis vinifera] gi|2...    67   2e-09
ref|XP_002278649.1| PREDICTED: syntaxin-22 [Vitis vinifera] gi|1...    66   3e-09
gb|ABK24740.1| unknown [Picea sitchensis] gi|148909620|gb|ABR179...    64   1e-08
ref|XP_002326741.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004165583.1| PREDICTED: LOW QUALITY PROTEIN: syntaxin-22-...    64   2e-08

>ref|XP_002274100.1| PREDICTED: syntaxin-22 [Vitis vinifera]
           gi|297737303|emb|CBI26504.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/74 (55%), Positives = 45/74 (60%)
 Frame = -1

Query: 236 LGLLVRRQKTRLHIGRLVKDTRAKLKQACETY*YTEVXXXXXXXXXXXXXXFQTVLKEFQ 57
           L L  +  KTRLHIG+LVKDT AKLKQA E   +TEV              FQ VLKEFQ
Sbjct: 62  LELREKLHKTRLHIGQLVKDTSAKLKQASENDQHTEVSASKRIADAKLAKDFQAVLKEFQ 121

Query: 56  KAQCLATEWETTYS 15
           KAQ LA E ET Y+
Sbjct: 122 KAQRLAVERETAYT 135


>ref|XP_002278649.1| PREDICTED: syntaxin-22 [Vitis vinifera]
           gi|147791633|emb|CAN75135.1| hypothetical protein
           VITISV_018887 [Vitis vinifera]
           gi|297742058|emb|CBI33845.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/66 (59%), Positives = 42/66 (63%)
 Frame = -1

Query: 212 KTRLHIGRLVKDTRAKLKQACETY*YTEVXXXXXXXXXXXXXXFQTVLKEFQKAQCLATE 33
           KTRLHIG+LVKDT AKLKQA ET  + EV              FQ VLKEFQKAQ LA E
Sbjct: 66  KTRLHIGQLVKDTSAKLKQASETDHHAEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAE 125

Query: 32  WETTYS 15
            ET Y+
Sbjct: 126 RETAYT 131


>gb|ABK24740.1| unknown [Picea sitchensis] gi|148909620|gb|ABR17901.1| unknown
           [Picea sitchensis]
          Length = 273

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/69 (56%), Positives = 42/69 (60%)
 Frame = -1

Query: 221 RRQKTRLHIGRLVKDTRAKLKQACETY*YTEVXXXXXXXXXXXXXXFQTVLKEFQKAQCL 42
           R  KTR HIG+LVKDT AKLK A ET  +TEV              FQ VLKEFQKAQ L
Sbjct: 62  RLHKTRQHIGQLVKDTSAKLKAASETDQHTEVSANKKIADAKLAKDFQAVLKEFQKAQRL 121

Query: 41  ATEWETTYS 15
           A E ET Y+
Sbjct: 122 AAERETAYT 130


>ref|XP_002326741.1| predicted protein [Populus trichocarpa] gi|222834063|gb|EEE72540.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/66 (57%), Positives = 41/66 (62%)
 Frame = -1

Query: 212 KTRLHIGRLVKDTRAKLKQACETY*YTEVXXXXXXXXXXXXXXFQTVLKEFQKAQCLATE 33
           KTRLHIG+LVKDT A+LKQA ET  Y  V              FQ VLKEFQKAQ LA E
Sbjct: 66  KTRLHIGQLVKDTSARLKQASETDHYAGVSQSKKIADAKLAKDFQAVLKEFQKAQRLAAE 125

Query: 32  WETTYS 15
            ET Y+
Sbjct: 126 RETAYT 131


>ref|XP_004165583.1| PREDICTED: LOW QUALITY PROTEIN: syntaxin-22-like [Cucumis sativus]
          Length = 253

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/66 (57%), Positives = 41/66 (62%)
 Frame = -1

Query: 212 KTRLHIGRLVKDTRAKLKQACETY*YTEVXXXXXXXXXXXXXXFQTVLKEFQKAQCLATE 33
           KTRLHIG+LVKDT AKLKQA +   + EV              FQ VLKEFQKAQ LA E
Sbjct: 66  KTRLHIGQLVKDTSAKLKQASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAE 125

Query: 32  WETTYS 15
            ET YS
Sbjct: 126 RETAYS 131


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