BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017960
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]                    586   e-165
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   583   e-164
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   583   e-164
gb|AEN19685.1| beta-tubulin [Cymbidium faberi] gi|344690813|gb|A...   582   e-164
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   582   e-164

>gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]
          Length = 444

 Score =  586 bits (1511), Expect = e-165
 Identities = 281/305 (92%), Positives = 288/305 (94%)
 Frame = +1

Query: 232  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAQGNYVGNSPLQLERANVYYNEASGGRFV 411
            MREILH+QAGQCGNQIGGKFWEVVC+EHGIDA GNYVG SP+QLER NVYYNEASGGR+V
Sbjct: 1    MREILHVQAGQCGNQIGGKFWEVVCDEHGIDATGNYVGTSPVQLERLNVYYNEASGGRYV 60

Query: 412  PRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 591
            PRAVLMDLEPGTMDSLRTGPYG++FRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61   PRAVLMDLEPGTMDSLRTGPYGKLFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 592  RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 771
            RKEAENCDCLQGFQVCH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121  RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 772  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 951
            EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 952  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM 1131
            RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM
Sbjct: 241  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM 300

Query: 1132 CAADP 1146
            CAADP
Sbjct: 301  CAADP 305


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  583 bits (1504), Expect = e-164
 Identities = 280/305 (91%), Positives = 288/305 (94%)
 Frame = +1

Query: 232  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAQGNYVGNSPLQLERANVYYNEASGGRFV 411
            MREILHIQAGQCGNQIGGKFWEVVC+EHGID +GNYVG+S LQLER NVYYNEASGGR+V
Sbjct: 1    MREILHIQAGQCGNQIGGKFWEVVCDEHGIDTKGNYVGDSHLQLERVNVYYNEASGGRYV 60

Query: 412  PRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 591
            PRAVLMDLEPGTMDSLRTGPYG+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61   PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 592  RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 771
            RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121  RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 772  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 951
            EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 952  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM 1131
            RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWD+KNMM
Sbjct: 241  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 1132 CAADP 1146
            CAADP
Sbjct: 301  CAADP 305


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
            gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
            [Ricinus communis]
          Length = 445

 Score =  583 bits (1503), Expect = e-164
 Identities = 280/305 (91%), Positives = 287/305 (94%)
 Frame = +1

Query: 232  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAQGNYVGNSPLQLERANVYYNEASGGRFV 411
            MREILHIQAGQCGNQIGGKFWEVVC+EHGID  GNYVGNS +QLER NVYYNEASGGR+V
Sbjct: 1    MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVYYNEASGGRYV 60

Query: 412  PRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 591
            PRAVLMDLEPGTMDSLRTGPYG+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61   PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 592  RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 771
            RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121  RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 772  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 951
            EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 952  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM 1131
            RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWD+KNMM
Sbjct: 241  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 1132 CAADP 1146
            CAADP
Sbjct: 301  CAADP 305


>gb|AEN19685.1| beta-tubulin [Cymbidium faberi] gi|344690813|gb|AEN19687.1|
            beta-tubulin [Cymbidium faberi]
          Length = 351

 Score =  582 bits (1499), Expect = e-164
 Identities = 279/305 (91%), Positives = 286/305 (93%)
 Frame = +1

Query: 232  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAQGNYVGNSPLQLERANVYYNEASGGRFV 411
            MREILHIQAGQCGNQIGGKFWEVVC+EHGID +GNY GNS LQLER NVYYNEASG R+V
Sbjct: 1    MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPKGNYAGNSHLQLERVNVYYNEASGNRYV 60

Query: 412  PRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 591
            PRAVLMDLEPGTMD+LRTGPYGQIFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61   PRAVLMDLEPGTMDALRTGPYGQIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 592  RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 771
            RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121  RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 772  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 951
            EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 952  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM 1131
            RFPGQLNSDLRKLAVNLIPFPRLHFFMVGF+PLTSRGSQQYRALTIPELTQQMWDSKNMM
Sbjct: 241  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFSPLTSRGSQQYRALTIPELTQQMWDSKNMM 300

Query: 1132 CAADP 1146
            CAADP
Sbjct: 301  CAADP 305


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi|222841924|gb|EEE79471.1|
            tubulin, beta chain [Populus trichocarpa]
          Length = 444

 Score =  582 bits (1499), Expect = e-164
 Identities = 279/305 (91%), Positives = 286/305 (93%)
 Frame = +1

Query: 232  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAQGNYVGNSPLQLERANVYYNEASGGRFV 411
            MREILHIQAGQCGNQIGGKFWEVVC+EHGID  GNY GNS +QLER NVYYNEASGGR+V
Sbjct: 1    MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVYYNEASGGRYV 60

Query: 412  PRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 591
            PRAVLMDLEPGTMDSLRTGPYG+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61   PRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 592  RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 771
            RKEAENCDCLQGFQ+CH              ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121  RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 772  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 951
            EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL
Sbjct: 181  EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCL 240

Query: 952  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDSKNMM 1131
            RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWD+KNMM
Sbjct: 241  RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMM 300

Query: 1132 CAADP 1146
            CAADP
Sbjct: 301  CAADP 305