BLASTX nr result

ID: Coptis25_contig00017956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017956
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    79   5e-13
dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana] g...    74   1e-11
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    74   1e-11
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    74   2e-11
ref|XP_004153592.1| PREDICTED: uncharacterized protein LOC101219...    73   2e-11

>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
 Frame = -3

Query: 486 KNGLKTLQRLKEWDVVKSESCVLCNTGVETEEHLFFLCRYAKVVWEG-LLMRAGYHKTRE 310
           ++ L T  RL  WD     SC+LC    E+ +HLFF C +   +W   LL+++  H+T  
Sbjct: 148 RDRLGTRGRLSRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWSRILLLKSSSHRT-- 205

Query: 309 QTWQEELNWILNRSKGKGGKQDALKLIFTGFIYWVWRERNSRIFEHKASSEQQLVEAIMR 130
             W  EL+WI N+  GK  ++   +L++   IY++W+ERN R+  H  S  + LV   + 
Sbjct: 206 GYWGVELSWIYNQGIGKSVRRKLWRLLWCATIYFIWQERNHRL--HGGSIREPLVVFQLI 263

Query: 129 EVKVKVHA 106
              +KV A
Sbjct: 264 RSCIKVRA 271


>dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana]
           gi|49823524|gb|AAT68745.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
           gi|60547763|gb|AAX23845.1| hypothetical protein
           At3g17200 [Arabidopsis thaliana]
          Length = 310

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
 Frame = -3

Query: 486 KNGLKTLQRLKEWDVVKSESCVLCNTGVETEEHLFFLCRYAKVVWEGLLMRAGYHKTREQ 307
           KN + T  R+  W+   + SC LC+  +ET +HLFF+C Y++ VWE +      H+    
Sbjct: 162 KNRMATGDRMVLWNQHVNTSCSLCDEPMETRDHLFFVCTYSRKVWEDIAKPILQHRF-SL 220

Query: 306 TWQEELNWILNRSKGKGGKQDALKLIFTGFIYWVWRERNSRIFEHKASSEQQLVEAIMRE 127
            W++ LN++  R   K  +   +K +F   I+ VW ERN+R    + S   +LV+ I + 
Sbjct: 221 DWKDILNYVCERDSDK-TRNFIIKHVFQNTIHSVWGERNARRHGEQPSPVGKLVKMIDKN 279

Query: 126 VKVKVHAM----KITMEEG 82
           ++ K+  +    ++T E+G
Sbjct: 280 MRNKLSTIRCGGRLTYEDG 298


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = -3

Query: 477  LKTLQRLKEWDVVKSESCVLCNTGVETEEHLFFLCRYAKVVWEGLLMRAGY-HKTREQTW 301
            L T  RL+ + +++S  C +CN   E+  HLFF C   + +W  +L   G  H  RE  W
Sbjct: 1307 LSTKDRLRRFGMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWLGRRHDPRE--W 1364

Query: 300  QEELNWILNRSKGKGGKQDALKLIFTGFIYWVWRERNSRIFEHKASSEQQLVE 142
              EL WI+  +KGKG K   LK+     +Y VW  RNS  F    + ++Q++E
Sbjct: 1365 DMELAWIIENTKGKGWKSALLKMATAETVYNVWHYRNSMCF--GTAVDKQVIE 1415


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -3

Query: 477  LKTLQRLKEWDVVKSESCVLCNTGVETEEHLFFLCRYAKVVWEGLLMRAGY-HKTREQTW 301
            L T  RL+ + +++S  C +CN   E+  HLFF C   + +W  +L   G  H  RE  W
Sbjct: 1190 LSTKDRLRRFRMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWLGRRHDPRE--W 1247

Query: 300  QEELNWILNRSKGKGGKQDALKLIFTGFIYWVWRERNSRIF 178
              EL WI+  +KGKG K   LK+     +Y VW  RNS  F
Sbjct: 1248 DMELAWIIENTKGKGWKSALLKMATAETVYNVWHYRNSMCF 1288


>ref|XP_004153592.1| PREDICTED: uncharacterized protein LOC101219214 [Cucumis sativus]
          Length = 152

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
 Frame = -3

Query: 486 KNGLKTLQRLKEWDVVKSESCVLCNTGVETEEHLFFLCRYAKVVWEGLLM------RAGY 325
           ++ L T  RL  WD +   SC+LC    E+ +HLFF C +   +W  +L+      R GY
Sbjct: 18  RDRLGTKDRLSWWDRLIPLSCLLCGWNYESRDHLFFSCHFGWEIWSRILLLMSSSQRIGY 77

Query: 324 HKTREQTWQEELNWILNRSKGKGGKQDALKLIFTGFIYWVWRERNSRIFEHKASSEQQLV 145
                  W  EL+WI N+  GK  ++    L++   IY++W+ERN R+          + 
Sbjct: 78  -------WGVELSWICNQGIGKSVRRKLWHLLWCATIYFIWQERNHRLHGGAVREPMVVF 130

Query: 144 EAIMREVKV 118
           + I   +KV
Sbjct: 131 QLIRSCIKV 139


Top