BLASTX nr result

ID: Coptis25_contig00017954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017954
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              103   1e-20
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   103   1e-20
ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792...   103   2e-20
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800...   103   2e-20
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali...   101   6e-20

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/73 (63%), Positives = 61/73 (83%)
 Frame = -2

Query: 223  VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44
            +VYFDDIL+YS S  EH++H++++L VLR EKLY  LKKC+F  D++VFLGFVVS DG++
Sbjct: 1060 IVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVK 1119

Query: 43   VDDSKVQAIIEWP 5
            VD+ KV+AI EWP
Sbjct: 1120 VDEEKVKAIREWP 1132


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/73 (61%), Positives = 61/73 (83%)
 Frame = -2

Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44
           +VYFDDIL+YS S  EH++H++ +L VLR E+LY  LKKC+F  D++VFLGFVVSADG++
Sbjct: 569 IVYFDDILVYSESLREHIEHLDSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVK 628

Query: 43  VDDSKVQAIIEWP 5
           VD+ KV+AI +WP
Sbjct: 629 VDEEKVKAIRDWP 641


>ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792366, partial [Glycine
           max]
          Length = 871

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/73 (68%), Positives = 59/73 (80%)
 Frame = -2

Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44
           VVYFDDILIYS+S   H+QH++ +L VLR EKLY  L+KCSF  D VVFLGFVVSA+G+R
Sbjct: 780 VVYFDDILIYSTSLDLHVQHLQSVLSVLRKEKLYANLEKCSFCTDHVVFLGFVVSAEGVR 839

Query: 43  VDDSKVQAIIEWP 5
           VD  KV+AI EWP
Sbjct: 840 VDVEKVKAIQEWP 852


>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
          Length = 1746

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/73 (68%), Positives = 59/73 (80%)
 Frame = -2

Query: 223  VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44
            VVYFDDILIYS+S   H+QH++ +L VLR EKLY  L+KCSF  D VVFLGFVVSA+G+R
Sbjct: 797  VVYFDDILIYSTSLDLHVQHLQSVLSVLRKEKLYANLEKCSFCTDHVVFLGFVVSAEGVR 856

Query: 43   VDDSKVQAIIEWP 5
            VD  KV+AI EWP
Sbjct: 857  VDVEKVKAIQEWP 869


>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
           gi|7267450|emb|CAB81146.1| putative polyprotein
           [Arabidopsis thaliana]
          Length = 1054

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/73 (61%), Positives = 60/73 (82%)
 Frame = -2

Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44
           +VYFDDIL+YS +   H+ H++++L +LR EKLY  LKKC+F  D++VFLGFVVSADGI+
Sbjct: 622 IVYFDDILVYSKNLEYHVMHLKLVLDLLRKEKLYANLKKCTFCTDNLVFLGFVVSADGIK 681

Query: 43  VDDSKVQAIIEWP 5
           VD+ KV+AI EWP
Sbjct: 682 VDEEKVKAIREWP 694


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