BLASTX nr result
ID: Coptis25_contig00017954
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00017954 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 103 1e-20 gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 103 1e-20 ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792... 103 2e-20 ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800... 103 2e-20 gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali... 101 6e-20 >gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 103 bits (258), Expect = 1e-20 Identities = 46/73 (63%), Positives = 61/73 (83%) Frame = -2 Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44 +VYFDDIL+YS S EH++H++++L VLR EKLY LKKC+F D++VFLGFVVS DG++ Sbjct: 1060 IVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVK 1119 Query: 43 VDDSKVQAIIEWP 5 VD+ KV+AI EWP Sbjct: 1120 VDEEKVKAIREWP 1132 >gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana] Length = 1215 Score = 103 bits (257), Expect = 1e-20 Identities = 45/73 (61%), Positives = 61/73 (83%) Frame = -2 Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44 +VYFDDIL+YS S EH++H++ +L VLR E+LY LKKC+F D++VFLGFVVSADG++ Sbjct: 569 IVYFDDILVYSESLREHIEHLDSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVK 628 Query: 43 VDDSKVQAIIEWP 5 VD+ KV+AI +WP Sbjct: 629 VDEEKVKAIRDWP 641 >ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792366, partial [Glycine max] Length = 871 Score = 103 bits (256), Expect = 2e-20 Identities = 50/73 (68%), Positives = 59/73 (80%) Frame = -2 Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44 VVYFDDILIYS+S H+QH++ +L VLR EKLY L+KCSF D VVFLGFVVSA+G+R Sbjct: 780 VVYFDDILIYSTSLDLHVQHLQSVLSVLRKEKLYANLEKCSFCTDHVVFLGFVVSAEGVR 839 Query: 43 VDDSKVQAIIEWP 5 VD KV+AI EWP Sbjct: 840 VDVEKVKAIQEWP 852 >ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max] Length = 1746 Score = 103 bits (256), Expect = 2e-20 Identities = 50/73 (68%), Positives = 59/73 (80%) Frame = -2 Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44 VVYFDDILIYS+S H+QH++ +L VLR EKLY L+KCSF D VVFLGFVVSA+G+R Sbjct: 797 VVYFDDILIYSTSLDLHVQHLQSVLSVLRKEKLYANLEKCSFCTDHVVFLGFVVSAEGVR 856 Query: 43 VDDSKVQAIIEWP 5 VD KV+AI EWP Sbjct: 857 VDVEKVKAIQEWP 869 >gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana] gi|7267450|emb|CAB81146.1| putative polyprotein [Arabidopsis thaliana] Length = 1054 Score = 101 bits (252), Expect = 6e-20 Identities = 45/73 (61%), Positives = 60/73 (82%) Frame = -2 Query: 223 VVYFDDILIYSSSESEHLQHIEILLGVLRTEKLYLQLKKCSFMVDSVVFLGFVVSADGIR 44 +VYFDDIL+YS + H+ H++++L +LR EKLY LKKC+F D++VFLGFVVSADGI+ Sbjct: 622 IVYFDDILVYSKNLEYHVMHLKLVLDLLRKEKLYANLKKCTFCTDNLVFLGFVVSADGIK 681 Query: 43 VDDSKVQAIIEWP 5 VD+ KV+AI EWP Sbjct: 682 VDEEKVKAIREWP 694