BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017952
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containi...   243   6e-62
emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]   243   1e-61
ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|2...   215   2e-53
ref|XP_002516576.1| pentatricopeptide repeat-containing protein,...   207   4e-51
ref|XP_003588542.1| Pentatricopeptide repeat-containing protein ...   206   1e-50

>ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Vitis vinifera]
           gi|296081891|emb|CBI20896.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  243 bits (621), Expect = 6e-62
 Identities = 119/194 (61%), Positives = 153/194 (78%)
 Frame = +2

Query: 2   QEFDSADKFYEEMLQLGIAPNMCMLQNMLDNTCQKKQYSKVNEFLKFVLDGGLKLSGQMA 181
           + FD AD+FYEEM+  GI PN  +L+N+L   C+++  SKV + LKF++DG  +++  MA
Sbjct: 225 RNFDCADRFYEEMMLSGIMPNGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMA 284

Query: 182 KKLMEIYSEVWKVEEMEELLLIVTRTNQDLGVLSQVHCGIIRMYAMSDRLDDLEFSVGRM 361
           +KLM +Y E   VE+MEELLL +  +NQ   VL QVHCGIIRM+AM DRLDD+E+SVGRM
Sbjct: 285 EKLMGLYFEHGTVEKMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRM 344

Query: 362 LEQGISFTCPDDVEKAICSYFRCAAYERLELFLERIRGSYRLTRSAYDLLVAGYRRAGMS 541
           L+QG+SF CPDD+EK +C+YFR  AYERL+LFL  I+GSY+LT+S YDLLVAGYRRAG+S
Sbjct: 345 LKQGMSFRCPDDIEKVVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLS 404

Query: 542 EKLDLVVKEMILAG 583
           EKLDLV+  M LAG
Sbjct: 405 EKLDLVMDGMKLAG 418


>emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]
          Length = 1331

 Score =  243 bits (619), Expect = 1e-61
 Identities = 118/194 (60%), Positives = 153/194 (78%)
 Frame = +2

Query: 2    QEFDSADKFYEEMLQLGIAPNMCMLQNMLDNTCQKKQYSKVNEFLKFVLDGGLKLSGQMA 181
            + FD AD+FYEEM+  GI P+  +L+N+L   C+++  SKV + LKF++DG  +++  MA
Sbjct: 1136 RNFDCADRFYEEMMLSGIMPBGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMA 1195

Query: 182  KKLMEIYSEVWKVEEMEELLLIVTRTNQDLGVLSQVHCGIIRMYAMSDRLDDLEFSVGRM 361
            +KLM +Y E   VE+MEELLL +  +NQ   VL QVHCGIIRM+AM DRLDD+E+SVGRM
Sbjct: 1196 EKLMGLYFEHGTVEKMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRM 1255

Query: 362  LEQGISFTCPDDVEKAICSYFRCAAYERLELFLERIRGSYRLTRSAYDLLVAGYRRAGMS 541
            L+QG+SF CPDD+EK +C+YFR  AYERL+LFL  I+GSY+LT+S YDLLVAGYRRAG+S
Sbjct: 1256 LKQGMSFRCPDDIEKVVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLS 1315

Query: 542  EKLDLVVKEMILAG 583
            EKLDLV+  M LAG
Sbjct: 1316 EKLDLVMDGMKLAG 1329


>ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|222855543|gb|EEE93090.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  215 bits (547), Expect = 2e-53
 Identities = 105/195 (53%), Positives = 147/195 (75%)
 Frame = +2

Query: 2   QEFDSADKFYEEMLQLGIAPNMCMLQNMLDNTCQKKQYSKVNEFLKFVLDGGLKLSGQMA 181
           ++FD+AD+ YEEM+ LGI P++ +++ +L+  C++    KV EFL F+L+   +++G M 
Sbjct: 230 RDFDTADRLYEEMMSLGIMPSLHIMEWVLEGHCKRGSCDKVKEFLNFLLECKFEINGNMI 289

Query: 182 KKLMEIYSEVWKVEEMEELLLIVTRTNQDLGVLSQVHCGIIRMYAMSDRLDDLEFSVGRM 361
           + ++ +YSE+ KV+EME LL ++   NQ    L Q+HCGIIR YAM D+LDD+EFSVGRM
Sbjct: 290 ENVVRLYSELGKVDEMEMLLEMLMEFNQVGEALLQLHCGIIRFYAMLDKLDDVEFSVGRM 349

Query: 362 LEQGISFTCPDDVEKAICSYFRCAAYERLELFLERIRGSYRLTRSAYDLLVAGYRRAGMS 541
           + QG+SF  P DVEK I SYFR  AYERL+LFLE I+  Y+LTRS YDLLVAGYRR G+ 
Sbjct: 350 MSQGMSFKSPSDVEKVISSYFRQEAYERLDLFLEHIKSYYKLTRSTYDLLVAGYRRVGLM 409

Query: 542 EKLDLVVKEMILAGL 586
           EKL+L++++M LAG+
Sbjct: 410 EKLNLLMEDMKLAGV 424


>ref|XP_002516576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544396|gb|EEF45917.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 416

 Score =  207 bits (528), Expect = 4e-51
 Identities = 99/193 (51%), Positives = 144/193 (74%)
 Frame = +2

Query: 2   QEFDSADKFYEEMLQLGIAPNMCMLQNMLDNTCQKKQYSKVNEFLKFVLDGGLKLSGQMA 181
           ++ D AD+ ++EM+ +G+ P+  +L+ +L+  C+++   +V  FL F+L+   + +G M 
Sbjct: 223 KDLDKADRLFDEMMSMGVMPSAAILEWVLEGLCKRRDCDRVRGFLNFLLECRFEFNGNMI 282

Query: 182 KKLMEIYSEVWKVEEMEELLLIVTRTNQDLGVLSQVHCGIIRMYAMSDRLDDLEFSVGRM 361
           +K++E+YSE+ KV+EME+LL I    NQ    LS++HCGIIR YA +DRLDD+E+SVGRM
Sbjct: 283 EKIVELYSELGKVDEMEKLLDICAEFNQVGETLSRLHCGIIRFYAKADRLDDVEYSVGRM 342

Query: 362 LEQGISFTCPDDVEKAICSYFRCAAYERLELFLERIRGSYRLTRSAYDLLVAGYRRAGMS 541
              G+ F  PDDVEK I SYFR  AY+RL+LFLE ++G ++LTRS YDLLVAGYRRAG++
Sbjct: 343 TSSGMLFRSPDDVEKVISSYFRKEAYDRLDLFLEHVKGYHKLTRSTYDLLVAGYRRAGLA 402

Query: 542 EKLDLVVKEMILA 580
           EKL+LV+ +M LA
Sbjct: 403 EKLELVMLDMKLA 415


>ref|XP_003588542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477590|gb|AES58793.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 428

 Score =  206 bits (523), Expect = 1e-50
 Identities = 104/195 (53%), Positives = 139/195 (71%)
 Frame = +2

Query: 2   QEFDSADKFYEEMLQLGIAPNMCMLQNMLDNTCQKKQYSKVNEFLKFVLDGGLKLSGQMA 181
           + ++ AD+ +EEM    + PN+ +L++ML   C +K   + NEF KFVLD   ++S  MA
Sbjct: 222 KNYEIADRVFEEMKISEMIPNVTILESMLKGFCSQKSLCRANEFFKFVLDNRWQISETMA 281

Query: 182 KKLMEIYSEVWKVEEMEELLLIVTRTNQDLGVLSQVHCGIIRMYAMSDRLDDLEFSVGRM 361
             L+ +Y E  +VE+MEELL  +T    D GVLSQ+HCGI+ MYAM DRLD++E SVGRM
Sbjct: 282 AMLVVLYHEQGQVEKMEELLETITSYPIDSGVLSQIHCGIVTMYAMLDRLDEVELSVGRM 341

Query: 362 LEQGISFTCPDDVEKAICSYFRCAAYERLELFLERIRGSYRLTRSAYDLLVAGYRRAGMS 541
           L+QG+SFT  DDVEK ICSYFR  AY+RL++FLE I+  Y  TRS YDLL++GYRRA + 
Sbjct: 342 LKQGMSFTSSDDVEKVICSYFRKEAYDRLDIFLECIKNCYVHTRSTYDLLISGYRRANLH 401

Query: 542 EKLDLVVKEMILAGL 586
           EK+DLV+ +M   GL
Sbjct: 402 EKVDLVLADMESVGL 416