BLASTX nr result

ID: Coptis25_contig00017938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017938
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28054.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange f...    90   2e-16
ref|XP_003528919.1| PREDICTED: rho guanine nucleotide exchange f...    88   6e-16
ref|XP_003533392.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...    86   4e-15
ref|XP_003620606.1| Pollen-specific kinase partner protein-like ...    85   5e-15

>emb|CBI28054.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/85 (58%), Positives = 59/85 (69%)
 Frame = -3

Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94
           DVGQS+LESYSR+LESL+ TVMSRIEDV+YADSLAQN S+A + R  S V  P  G  + 
Sbjct: 414 DVGQSILESYSRILESLAFTVMSRIEDVMYADSLAQNPSLAQTGRKPSAVCLPLTGSTRE 473

Query: 93  LESGGELERLNSIETPTSMTLSDFL 19
                  E     +TPTSMTLSDF+
Sbjct: 474 ETEKNPTE----TQTPTSMTLSDFM 494


>ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis
           vinifera]
          Length = 506

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/85 (58%), Positives = 59/85 (69%)
 Frame = -3

Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94
           DVGQS+LESYSR+LESL+ TVMSRIEDV+YADSLAQN S+A + R  S V  P  G  + 
Sbjct: 365 DVGQSILESYSRILESLAFTVMSRIEDVMYADSLAQNPSLAQTGRKPSAVCLPLTGSTRE 424

Query: 93  LESGGELERLNSIETPTSMTLSDFL 19
                  E     +TPTSMTLSDF+
Sbjct: 425 ETEKNPTE----TQTPTSMTLSDFM 445


>ref|XP_003528919.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Glycine
           max]
          Length = 562

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/85 (57%), Positives = 61/85 (71%)
 Frame = -3

Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94
           DVGQ++LESYSRV+ESL++TVMSRI+DVLYADS+ +N S+A S+R  S  S+P       
Sbjct: 406 DVGQAILESYSRVIESLAYTVMSRIDDVLYADSVTKNPSLAVSSRRYSLDSSPAATEQTS 465

Query: 93  LESGGELERLNSIETPTSMTLSDFL 19
             S  E   L S ETP SMTLSDF+
Sbjct: 466 PNSEDENSYLQSSETPPSMTLSDFM 490


>ref|XP_003533392.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Glycine max]
          Length = 553

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 48/85 (56%), Positives = 60/85 (70%)
 Frame = -3

Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94
           DVGQ++LESYSRV+ESL++TVMSRI+DVLYADS+ +N S+A S+R  S  S P       
Sbjct: 407 DVGQAILESYSRVIESLAYTVMSRIDDVLYADSVTKNPSLAVSSRRYSLDSVPVAEQTS- 465

Query: 93  LESGGELERLNSIETPTSMTLSDFL 19
             SG E+  L   ETP SMTLSD +
Sbjct: 466 PNSGDEISNLKFSETPPSMTLSDVM 490


>ref|XP_003620606.1| Pollen-specific kinase partner protein-like protein [Medicago
           truncatula] gi|355495621|gb|AES76824.1| Pollen-specific
           kinase partner protein-like protein [Medicago
           truncatula]
          Length = 154

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/85 (51%), Positives = 60/85 (70%)
 Frame = -3

Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94
           DVGQ++LESYSRV+ESL++TV+SRI+DVLY DS+ +N S+A S+R  S  S P       
Sbjct: 15  DVGQAILESYSRVIESLAYTVLSRIDDVLYVDSMTKNPSLAASSRRFSLDSLPMSDQTSP 74

Query: 93  LESGGELERLNSIETPTSMTLSDFL 19
                 + R++S +TP SMTLSDF+
Sbjct: 75  NSEDSGIGRMSSSDTPPSMTLSDFM 99


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