BLASTX nr result
ID: Coptis25_contig00017938
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00017938 (275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28054.3| unnamed protein product [Vitis vinifera] 90 2e-16 ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange f... 90 2e-16 ref|XP_003528919.1| PREDICTED: rho guanine nucleotide exchange f... 88 6e-16 ref|XP_003533392.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ... 86 4e-15 ref|XP_003620606.1| Pollen-specific kinase partner protein-like ... 85 5e-15 >emb|CBI28054.3| unnamed protein product [Vitis vinifera] Length = 536 Score = 89.7 bits (221), Expect = 2e-16 Identities = 50/85 (58%), Positives = 59/85 (69%) Frame = -3 Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94 DVGQS+LESYSR+LESL+ TVMSRIEDV+YADSLAQN S+A + R S V P G + Sbjct: 414 DVGQSILESYSRILESLAFTVMSRIEDVMYADSLAQNPSLAQTGRKPSAVCLPLTGSTRE 473 Query: 93 LESGGELERLNSIETPTSMTLSDFL 19 E +TPTSMTLSDF+ Sbjct: 474 ETEKNPTE----TQTPTSMTLSDFM 494 >ref|XP_002280831.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis vinifera] Length = 506 Score = 89.7 bits (221), Expect = 2e-16 Identities = 50/85 (58%), Positives = 59/85 (69%) Frame = -3 Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94 DVGQS+LESYSR+LESL+ TVMSRIEDV+YADSLAQN S+A + R S V P G + Sbjct: 365 DVGQSILESYSRILESLAFTVMSRIEDVMYADSLAQNPSLAQTGRKPSAVCLPLTGSTRE 424 Query: 93 LESGGELERLNSIETPTSMTLSDFL 19 E +TPTSMTLSDF+ Sbjct: 425 ETEKNPTE----TQTPTSMTLSDFM 445 >ref|XP_003528919.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Glycine max] Length = 562 Score = 88.2 bits (217), Expect = 6e-16 Identities = 49/85 (57%), Positives = 61/85 (71%) Frame = -3 Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94 DVGQ++LESYSRV+ESL++TVMSRI+DVLYADS+ +N S+A S+R S S+P Sbjct: 406 DVGQAILESYSRVIESLAYTVMSRIDDVLYADSVTKNPSLAVSSRRYSLDSSPAATEQTS 465 Query: 93 LESGGELERLNSIETPTSMTLSDFL 19 S E L S ETP SMTLSDF+ Sbjct: 466 PNSEDENSYLQSSETPPSMTLSDFM 490 >ref|XP_003533392.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 8-like [Glycine max] Length = 553 Score = 85.5 bits (210), Expect = 4e-15 Identities = 48/85 (56%), Positives = 60/85 (70%) Frame = -3 Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94 DVGQ++LESYSRV+ESL++TVMSRI+DVLYADS+ +N S+A S+R S S P Sbjct: 407 DVGQAILESYSRVIESLAYTVMSRIDDVLYADSVTKNPSLAVSSRRYSLDSVPVAEQTS- 465 Query: 93 LESGGELERLNSIETPTSMTLSDFL 19 SG E+ L ETP SMTLSD + Sbjct: 466 PNSGDEISNLKFSETPPSMTLSDVM 490 >ref|XP_003620606.1| Pollen-specific kinase partner protein-like protein [Medicago truncatula] gi|355495621|gb|AES76824.1| Pollen-specific kinase partner protein-like protein [Medicago truncatula] Length = 154 Score = 85.1 bits (209), Expect = 5e-15 Identities = 44/85 (51%), Positives = 60/85 (70%) Frame = -3 Query: 273 DVGQSVLESYSRVLESLSHTVMSRIEDVLYADSLAQNQSVADSNRMTSTVSAPERGLAKL 94 DVGQ++LESYSRV+ESL++TV+SRI+DVLY DS+ +N S+A S+R S S P Sbjct: 15 DVGQAILESYSRVIESLAYTVLSRIDDVLYVDSMTKNPSLAASSRRFSLDSLPMSDQTSP 74 Query: 93 LESGGELERLNSIETPTSMTLSDFL 19 + R++S +TP SMTLSDF+ Sbjct: 75 NSEDSGIGRMSSSDTPPSMTLSDFM 99