BLASTX nr result

ID: Coptis25_contig00017929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017929
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265233.1| PREDICTED: uncharacterized protein LOC100256...   222   1e-55
ref|XP_002532211.1| conserved hypothetical protein [Ricinus comm...   218   1e-54
ref|XP_002321204.1| predicted protein [Populus trichocarpa] gi|2...   215   1e-53
ref|XP_003556896.1| PREDICTED: uncharacterized protein LOC100804...   209   5e-52
ref|XP_003542189.1| PREDICTED: uncharacterized protein LOC100802...   209   7e-52

>ref|XP_002265233.1| PREDICTED: uncharacterized protein LOC100256200 [Vitis vinifera]
           gi|296085052|emb|CBI28467.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score =  222 bits (565), Expect = 1e-55
 Identities = 124/226 (54%), Positives = 147/226 (65%), Gaps = 1/226 (0%)
 Frame = +3

Query: 201 MFPSSSLISGNFSS-PKFSIRVPCEPLPKPNKVTSFIKVSLKLCNGLSVSTCALSTKWKI 377
           M  +++LIS NFS+ P  S++        PN   SFI+        LS     +ST  K 
Sbjct: 1   MLATTTLISCNFSALPFLSLKTR-----NPNSRISFIRTPNPPI--LSKPKHPISTFQKR 53

Query: 378 NGVLQICHNSLNTENPKETLPEEEPIVPSVENNSNKLGTERDWTTSILLFALWTGLMYYV 557
            G LQIC +S NT+NP++   E+      +E+ +   G   DWTTS LLF LW GL+YYV
Sbjct: 54  GG-LQICQSSFNTQNPEDPAAEKGA---KLESENGDGGDGGDWTTSALLFVLWVGLIYYV 109

Query: 558 FVLTPNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSK 737
           F LTP+QTPSRD+YFL+KLLNLKGDDGF MN VLVSLWYIMGLWP+ YSMLLLP+GRSSK
Sbjct: 110 FNLTPDQTPSRDVYFLKKLLNLKGDDGFRMNDVLVSLWYIMGLWPLVYSMLLLPTGRSSK 169

Query: 738 DGVRVWPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNF 875
             V VWPFL  S FGG YALLPYFVLW+            RWPLNF
Sbjct: 170 GKVPVWPFLTFSFFGGVYALLPYFVLWRPPPPPVEETELRRWPLNF 215


>ref|XP_002532211.1| conserved hypothetical protein [Ricinus communis]
           gi|223528107|gb|EEF30180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  218 bits (555), Expect = 1e-54
 Identities = 113/228 (49%), Positives = 150/228 (65%), Gaps = 3/228 (1%)
 Frame = +3

Query: 201 MFPSSSLISGNFSSPKFSIRVPCEPLPKPNKVTSFIKVSLKLCNGLSVSTCALSTK---W 371
           M   S+LIS NF S     + P       +     +K      +   + + + +T    +
Sbjct: 1   MLAHSNLISCNFPSLPLLCKNPRPATTTASLQAQILKHKTTYASSNFLKSNSYNTSIFPY 60

Query: 372 KINGVLQICHNSLNTENPKETLPEEEPIVPSVENNSNKLGTERDWTTSILLFALWTGLMY 551
           K   VLQ+C++ L++++      +++PI+   E+++N +   RDWT+SILLF  W  L+Y
Sbjct: 61  KKRCVLQVCNSVLDSKDS-----DKDPIL---ESDTNNVKEGRDWTSSILLFVFWGALLY 112

Query: 552 YVFVLTPNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRS 731
           YVF L P+QTP+ DMYFL+KLLNLKGDDGFEMN+VLVSLWY+MGLWP+ YSMLLLP+GRS
Sbjct: 113 YVFNLAPDQTPTTDMYFLKKLLNLKGDDGFEMNEVLVSLWYVMGLWPLVYSMLLLPTGRS 172

Query: 732 SKDGVRVWPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNF 875
           SK  + VWPFLVLSCFGGAYALLPYFVLW+           G+WPLNF
Sbjct: 173 SKSKIPVWPFLVLSCFGGAYALLPYFVLWRPPPPPVEESELGKWPLNF 220


>ref|XP_002321204.1| predicted protein [Populus trichocarpa] gi|222861977|gb|EEE99519.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  215 bits (547), Expect = 1e-53
 Identities = 116/208 (55%), Positives = 139/208 (66%), Gaps = 7/208 (3%)
 Frame = +3

Query: 219 LISGNFSSPKFSIRVPCEPLPKPNKVTSFIKVSLKLCN-----GLSVSTCALSTKWKIN- 380
           +IS NFS       +P +  PKP  +      SL   N     GL++S          N 
Sbjct: 8   IISCNFSC------LPLKVNPKPKSLLKTHYTSLLFSNTSTREGLNISNLVKPQYIYNNK 61

Query: 381 -GVLQICHNSLNTENPKETLPEEEPIVPSVENNSNKLGTERDWTTSILLFALWTGLMYYV 557
            GVLQ C+++LN++N       ++ ++        K G ERDWTTSILLF  W GL+YYV
Sbjct: 62  KGVLQTCYSTLNSDNKSP----DDQVLDKDATGGGKEG-ERDWTTSILLFVFWGGLIYYV 116

Query: 558 FVLTPNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRSSK 737
           F LTP+QTPSRDMYFLEKLL LKGDDGF MN VLVSLWYIMGLWP+ YSMLLLP+GRSSK
Sbjct: 117 FNLTPDQTPSRDMYFLEKLLYLKGDDGFRMNSVLVSLWYIMGLWPLVYSMLLLPTGRSSK 176

Query: 738 DGVRVWPFLVLSCFGGAYALLPYFVLWK 821
             + VWPFL+LSCFGGAYALLPYF+LW+
Sbjct: 177 TNIPVWPFLILSCFGGAYALLPYFILWR 204


>ref|XP_003556896.1| PREDICTED: uncharacterized protein LOC100804721 [Glycine max]
          Length = 333

 Score =  209 bits (533), Expect = 5e-52
 Identities = 107/168 (63%), Positives = 117/168 (69%)
 Frame = +3

Query: 372 KINGVLQICHNSLNTENPKETLPEEEPIVPSVENNSNKLGTERDWTTSILLFALWTGLMY 551
           K  G + ICH+          L EE      V  NSN     RDWTTSILLF LW  LMY
Sbjct: 73  KKKGGVHICHS----------LKEES----EVGGNSNN---PRDWTTSILLFLLWAALMY 115

Query: 552 YVFVLTPNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRS 731
           YVF LTPNQTPSRD YFL+KLLNLKGDDGF MN+VLVSLWY+MGLWP+ YSMLLLP+GRS
Sbjct: 116 YVFFLTPNQTPSRDTYFLKKLLNLKGDDGFRMNEVLVSLWYLMGLWPLVYSMLLLPTGRS 175

Query: 732 SKDGVRVWPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNF 875
           SK+ + VWPFL+LSCFGGAYAL PYFVLWK             WPLNF
Sbjct: 176 SKNIIPVWPFLILSCFGGAYALFPYFVLWKPPAPPVEETQLKTWPLNF 223


>ref|XP_003542189.1| PREDICTED: uncharacterized protein LOC100802797 [Glycine max]
          Length = 331

 Score =  209 bits (532), Expect = 7e-52
 Identities = 105/168 (62%), Positives = 115/168 (68%)
 Frame = +3

Query: 372 KINGVLQICHNSLNTENPKETLPEEEPIVPSVENNSNKLGTERDWTTSILLFALWTGLMY 551
           K  G   ICH+            +EE  V    NN       RDWTTSILLF LW  LMY
Sbjct: 71  KRKGCAHICHSL-----------KEESEVGGNGNNG------RDWTTSILLFLLWAALMY 113

Query: 552 YVFVLTPNQTPSRDMYFLEKLLNLKGDDGFEMNKVLVSLWYIMGLWPISYSMLLLPSGRS 731
           YVF LTPNQTPSRD YFL+KLLNLKGDDGF MN+VLVSLWY+MGLWP+ YSMLLLP+GRS
Sbjct: 114 YVFFLTPNQTPSRDTYFLKKLLNLKGDDGFRMNEVLVSLWYLMGLWPLVYSMLLLPTGRS 173

Query: 732 SKDGVRVWPFLVLSCFGGAYALLPYFVLWKXXXXXXXXXXXGRWPLNF 875
           SK+ + VWPFL+LSCFGGAY LLPYFVLWK             WPLNF
Sbjct: 174 SKNNIPVWPFLILSCFGGAYVLLPYFVLWKPPAPPVEETQLKTWPLNF 221


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