BLASTX nr result

ID: Coptis25_contig00017927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017927
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144302.1| PREDICTED: uncharacterized protein LOC101212...   176   5e-49
ref|XP_002527378.1| conserved hypothetical protein [Ricinus comm...   166   3e-48
ref|XP_002307933.1| predicted protein [Populus trichocarpa] gi|2...   168   6e-47
ref|XP_002283750.1| PREDICTED: uncharacterized protein LOC100249...   178   8e-47
emb|CBI32851.3| unnamed protein product [Vitis vinifera]              178   8e-47

>ref|XP_004144302.1| PREDICTED: uncharacterized protein LOC101212156 isoform 1 [Cucumis
           sativus] gi|449525636|ref|XP_004169822.1| PREDICTED:
           uncharacterized protein LOC101231634 isoform 1 [Cucumis
           sativus]
          Length = 241

 Score =  176 bits (445), Expect(2) = 5e-49
 Identities = 79/110 (71%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
 Frame = +3

Query: 447 GVAVSCASVHVGQIRPGGVRGNHRHHTCNETFLIWGAETKFRLENPRVA-KGYAEVYIGA 623
           G AV+CASVH+G+I+PG +RGNHRHHTCNETF++WGA TKFRLEN  V  KGYAEV IGA
Sbjct: 132 GGAVTCASVHIGEIQPGAMRGNHRHHTCNETFVLWGARTKFRLENNNVGDKGYAEVIIGA 191

Query: 624 EEVTVSSSPRGTAHALVNVDSLRTTYFIGCQDSVITYNSSNTDFKVWKDL 773
           +EV +++SPRGTAHAL+N+D +RTT F+GCQD  I YNSS +DFKVWKDL
Sbjct: 192 DEVAIAASPRGTAHALINMDPVRTTLFLGCQDGSINYNSSTSDFKVWKDL 241



 Score = 45.8 bits (107), Expect(2) = 5e-49
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
 Frame = +2

Query: 14  MANPRRSSYS---NTLPLTNXXXXXXXXXXXXXXXHFTTSFIH---FLKRPHAXXXXXXX 175
           MANPRR+S S   +T P +                    SF H   FLK+PHA       
Sbjct: 1   MANPRRNSISFSSSTNPQSLESPFHSQSQARSLSLSLALSFSHLKNFLKKPHAFPFLLSV 60

Query: 176 XXXXXXXXXXXXXXNNNNHFTPYHSKGINKWEKANDDENANVRRLNSD--GVLSRDNRGW 349
                         ++++ F+  + +  + W + +DD  AN+ R NS     +++DNRGW
Sbjct: 61  FLLLTWIFLRIQ--HSSSQFSSRYHQATDSWSR-DDDLKANLVRFNSGFPSPIAKDNRGW 117

Query: 350 MFNPVVAANDAGL 388
           + +P+  A  +G+
Sbjct: 118 LLDPISLALGSGI 130


>ref|XP_002527378.1| conserved hypothetical protein [Ricinus communis]
           gi|223533249|gb|EEF35003.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 232

 Score =  166 bits (419), Expect(2) = 3e-48
 Identities = 75/109 (68%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
 Frame = +3

Query: 447 GVAVSCASVHVGQIRPGGVRGNHRHHTCNETFLIWGAETKFRLENPRVA-KGYAEVYIGA 623
           G AVSCAS+HVG+IRPG VRGNHRH+TCNETF+IWGA+T FRLEN ++  KGYAEV IGA
Sbjct: 123 GGAVSCASLHVGEIRPGTVRGNHRHYTCNETFVIWGAKTLFRLENGQIVDKGYAEVVIGA 182

Query: 624 EEVTVSSSPRGTAHALVNVDSLRTTYFIGCQDSVITYNSSNTDFKVWKD 770
           +EV +++SP GTAH LVN+D + +T+FIGCQD+++ YN S TDF VWKD
Sbjct: 183 DEVAIAASPSGTAHLLVNLDPILSTFFIGCQDNLMNYNDSTTDFNVWKD 231



 Score = 53.1 bits (126), Expect(2) = 3e-48
 Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
 Frame = +2

Query: 14  MANPRRSSYSNTLPLTNXXXXXXXXXXXXXXXHFTTSFIHFLKRPHAXXXXXXXXXXXXX 193
           MANPRRSSYSN+                       +S  HFLK+PHA             
Sbjct: 1   MANPRRSSYSNS----------SENPFQVQNLSRLSSLKHFLKKPHAFPFLLSIFLFLTW 50

Query: 194 XXXXXXXXNNNNHFTPYHSKGINKWEKAN----DDENANVRRLNSDGVLS---RDNRGWM 352
                   N +N F    S   N  ++      DD+NAN+ R  SD   S   +D RGW+
Sbjct: 51  LSLKLQHRNASN-FASSSSSSFNLHQQTKSTKVDDKNANLIRFKSDFFASPIIKDKRGWL 109

Query: 353 FNPVVAANDAGL 388
            +PV  A D+G+
Sbjct: 110 LDPVSLALDSGI 121


>ref|XP_002307933.1| predicted protein [Populus trichocarpa] gi|222853909|gb|EEE91456.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  168 bits (426), Expect(2) = 6e-47
 Identities = 76/110 (69%), Positives = 89/110 (80%), Gaps = 1/110 (0%)
 Frame = +3

Query: 447 GVAVSCASVHVGQIRPGGVRGNHRHHTCNETFLIWGAETKFRLENPRVA-KGYAEVYIGA 623
           G AVSC S+H+G+IRPGG RGNHRHHTCNETF+IWGA+T FRLEN ++  KGYAEV +G 
Sbjct: 113 GGAVSCFSIHIGEIRPGGARGNHRHHTCNETFVIWGAKTLFRLENNQIVDKGYAEVIVGV 172

Query: 624 EEVTVSSSPRGTAHALVNVDSLRTTYFIGCQDSVITYNSSNTDFKVWKDL 773
           +EV V++SP GT HA+VN+D   T Y IGCQDS I YNSS TDF VWKDL
Sbjct: 173 DEVAVAASPSGTGHAIVNMDRTHTAYLIGCQDSTINYNSSATDFSVWKDL 222



 Score = 46.2 bits (108), Expect(2) = 6e-47
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
 Frame = +2

Query: 14  MANPRRSSYSNTLPLTNXXXXXXXXXXXXXXXHFTTSFI-HFLKRPHAXXXXXXXXXXXX 190
           MANPRR+SYSN    +                H   S I HFLK+P A            
Sbjct: 1   MANPRRNSYSNNTENS-----------FQLQNHSRLSSIKHFLKKPLAFPFLLSIFLLLA 49

Query: 191 XXXXXXXXXNNNNHFTPYHSKGINKWEKANDDENANVRRLNSDGVLSRDNRGWMFNPVVA 370
                    +++   +  H +   KW +  +DE AN+ R  S  + S+D RGW+ +PV  
Sbjct: 50  WISLRLQHSSSSFSSSNLHER---KWSQ-EEDEKANLIRFKSGFLSSKDKRGWLLDPVSI 105

Query: 371 ANDAGL 388
           A + G+
Sbjct: 106 ALEYGI 111


>ref|XP_002283750.1| PREDICTED: uncharacterized protein LOC100249949 [Vitis vinifera]
          Length = 220

 Score =  178 bits (452), Expect(2) = 8e-47
 Identities = 82/110 (74%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
 Frame = +3

Query: 447 GVAVSCASVHVGQIRPGGVRGNHRHHTCNETFLIWGAETKFRLENPRVA-KGYAEVYIGA 623
           G AV+CASVHVG+IRPGG+RGNHRHH CNETF+IWGA+T FRLEN +V  KGYAEV IGA
Sbjct: 111 GGAVNCASVHVGEIRPGGMRGNHRHHGCNETFIIWGAKTAFRLENHQVPEKGYAEVIIGA 170

Query: 624 EEVTVSSSPRGTAHALVNVDSLRTTYFIGCQDSVITYNSSNTDFKVWKDL 773
            EV V++SP GTAHAL+N+D +RT +F+GCQDS+I YNSS TDFKVWKDL
Sbjct: 171 NEVAVAASPSGTAHALINIDPIRTAFFMGCQDSIINYNSSATDFKVWKDL 220



 Score = 35.8 bits (81), Expect(2) = 8e-47
 Identities = 32/125 (25%), Positives = 45/125 (36%)
 Frame = +2

Query: 14  MANPRRSSYSNTLPLTNXXXXXXXXXXXXXXXHFTTSFIHFLKRPHAXXXXXXXXXXXXX 193
           M NPRR S+ NT+                      +S   FLKRP A             
Sbjct: 2   MVNPRRISHPNTISNQTSETLTPSL----------SSLFFFLKRPQAFPFLLSIFLLLTW 51

Query: 194 XXXXXXXXNNNNHFTPYHSKGINKWEKANDDENANVRRLNSDGVLSRDNRGWMFNPVVAA 373
                   +  N          N ++  + D  AN+ R +S      D RGW+ NP+ AA
Sbjct: 52  LSLRLQRSSLFNS-----PPNRNAFQTLDHDREANLVRFSSH--FFTDKRGWLLNPISAA 104

Query: 374 NDAGL 388
           +DA +
Sbjct: 105 SDASI 109


>emb|CBI32851.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  178 bits (452), Expect(2) = 8e-47
 Identities = 82/110 (74%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
 Frame = +3

Query: 447 GVAVSCASVHVGQIRPGGVRGNHRHHTCNETFLIWGAETKFRLENPRVA-KGYAEVYIGA 623
           G AV+CASVHVG+IRPGG+RGNHRHH CNETF+IWGA+T FRLEN +V  KGYAEV IGA
Sbjct: 110 GGAVNCASVHVGEIRPGGMRGNHRHHGCNETFIIWGAKTAFRLENHQVPEKGYAEVIIGA 169

Query: 624 EEVTVSSSPRGTAHALVNVDSLRTTYFIGCQDSVITYNSSNTDFKVWKDL 773
            EV V++SP GTAHAL+N+D +RT +F+GCQDS+I YNSS TDFKVWKDL
Sbjct: 170 NEVAVAASPSGTAHALINIDPIRTAFFMGCQDSIINYNSSATDFKVWKDL 219



 Score = 35.8 bits (81), Expect(2) = 8e-47
 Identities = 32/125 (25%), Positives = 45/125 (36%)
 Frame = +2

Query: 14  MANPRRSSYSNTLPLTNXXXXXXXXXXXXXXXHFTTSFIHFLKRPHAXXXXXXXXXXXXX 193
           M NPRR S+ NT+                      +S   FLKRP A             
Sbjct: 1   MVNPRRISHPNTISNQTSETLTPSL----------SSLFFFLKRPQAFPFLLSIFLLLTW 50

Query: 194 XXXXXXXXNNNNHFTPYHSKGINKWEKANDDENANVRRLNSDGVLSRDNRGWMFNPVVAA 373
                   +  N          N ++  + D  AN+ R +S      D RGW+ NP+ AA
Sbjct: 51  LSLRLQRSSLFNS-----PPNRNAFQTLDHDREANLVRFSSH--FFTDKRGWLLNPISAA 103

Query: 374 NDAGL 388
           +DA +
Sbjct: 104 SDASI 108


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