BLASTX nr result
ID: Coptis25_contig00017920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00017920 (594 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|2... 90 3e-16 ref|XP_002531059.1| brca1 associated ring domain, putative [Rici... 89 4e-16 ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 89 6e-16 gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indi... 88 1e-15 ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group] g... 88 1e-15 >ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|222847593|gb|EEE85140.1| predicted protein [Populus trichocarpa] Length = 1029 Score = 89.7 bits (221), Expect = 3e-16 Identities = 41/52 (78%), Positives = 44/52 (84%) Frame = -1 Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121 +MG ELKCPICLSLL AVSLTCN+VFCN CI +SMKS S CPVCKV YRRR Sbjct: 35 KMGRELKCPICLSLLDTAVSLTCNHVFCNSCIVKSMKSGSDCPVCKVPYRRR 86 >ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis] gi|223529354|gb|EEF31320.1| brca1 associated ring domain, putative [Ricinus communis] Length = 987 Score = 89.4 bits (220), Expect = 4e-16 Identities = 39/52 (75%), Positives = 46/52 (88%) Frame = -1 Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121 +MG+ELKCPICLSLL AVSLTCN++FCN CI +SMKS S+CPVCKV Y+RR Sbjct: 9 KMGTELKCPICLSLLNSAVSLTCNHIFCNSCIVKSMKSGSNCPVCKVPYQRR 60 >ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Brachypodium distachyon] Length = 993 Score = 89.0 bits (219), Expect = 6e-16 Identities = 39/52 (75%), Positives = 46/52 (88%) Frame = -1 Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121 +MG ELKCPICLSLL+ AVS+TCN++FCN C+TESMKS S CPVCKV +RRR Sbjct: 9 KMGRELKCPICLSLLRSAVSVTCNHIFCNDCLTESMKSASSCPVCKVPFRRR 60 >gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indica Group] Length = 987 Score = 87.8 bits (216), Expect = 1e-15 Identities = 39/52 (75%), Positives = 45/52 (86%) Frame = -1 Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121 +MG ELKCPICLSLL AVS++CN+VFCN C+TESMKS S CPVCKV +RRR Sbjct: 9 KMGRELKCPICLSLLSSAVSISCNHVFCNDCLTESMKSTSSCPVCKVPFRRR 60 >ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group] gi|113579570|dbj|BAF17933.1| Os05g0512000 [Oryza sativa Japonica Group] gi|222632199|gb|EEE64331.1| hypothetical protein OsJ_19171 [Oryza sativa Japonica Group] Length = 987 Score = 87.8 bits (216), Expect = 1e-15 Identities = 39/52 (75%), Positives = 45/52 (86%) Frame = -1 Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121 +MG ELKCPICLSLL AVS++CN+VFCN C+TESMKS S CPVCKV +RRR Sbjct: 9 KMGRELKCPICLSLLSSAVSISCNHVFCNDCLTESMKSTSSCPVCKVPFRRR 60