BLASTX nr result

ID: Coptis25_contig00017920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017920
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|2...    90   3e-16
ref|XP_002531059.1| brca1 associated ring domain, putative [Rici...    89   4e-16
ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    89   6e-16
gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indi...    88   1e-15
ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group] g...    88   1e-15

>ref|XP_002300335.1| predicted protein [Populus trichocarpa] gi|222847593|gb|EEE85140.1|
           predicted protein [Populus trichocarpa]
          Length = 1029

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 41/52 (78%), Positives = 44/52 (84%)
 Frame = -1

Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121
           +MG ELKCPICLSLL  AVSLTCN+VFCN CI +SMKS S CPVCKV YRRR
Sbjct: 35  KMGRELKCPICLSLLDTAVSLTCNHVFCNSCIVKSMKSGSDCPVCKVPYRRR 86


>ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223529354|gb|EEF31320.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 987

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -1

Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121
           +MG+ELKCPICLSLL  AVSLTCN++FCN CI +SMKS S+CPVCKV Y+RR
Sbjct: 9   KMGTELKCPICLSLLNSAVSLTCNHIFCNSCIVKSMKSGSNCPVCKVPYQRR 60


>ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
           [Brachypodium distachyon]
          Length = 993

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -1

Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121
           +MG ELKCPICLSLL+ AVS+TCN++FCN C+TESMKS S CPVCKV +RRR
Sbjct: 9   KMGRELKCPICLSLLRSAVSVTCNHIFCNDCLTESMKSASSCPVCKVPFRRR 60


>gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indica Group]
          Length = 987

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = -1

Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121
           +MG ELKCPICLSLL  AVS++CN+VFCN C+TESMKS S CPVCKV +RRR
Sbjct: 9   KMGRELKCPICLSLLSSAVSISCNHVFCNDCLTESMKSTSSCPVCKVPFRRR 60


>ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group]
           gi|113579570|dbj|BAF17933.1| Os05g0512000 [Oryza sativa
           Japonica Group] gi|222632199|gb|EEE64331.1| hypothetical
           protein OsJ_19171 [Oryza sativa Japonica Group]
          Length = 987

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = -1

Query: 276 EMGSELKCPICLSLLKLAVSLTCNNVFCNLCITESMKSDSHCPVCKVSYRRR 121
           +MG ELKCPICLSLL  AVS++CN+VFCN C+TESMKS S CPVCKV +RRR
Sbjct: 9   KMGRELKCPICLSLLSSAVSISCNHVFCNDCLTESMKSTSSCPVCKVPFRRR 60


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