BLASTX nr result

ID: Coptis25_contig00017915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017915
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609353.1| YABBY protein [Medicago truncatula] gi|35551...   127   9e-28
ref|XP_002285328.1| PREDICTED: axial regulator YABBY 5 [Vitis vi...   127   1e-27
ref|NP_001238347.1| uncharacterized protein LOC100499942 [Glycin...   126   2e-27
ref|XP_002324648.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
gb|ACJ85113.1| unknown [Medicago truncatula] gi|388490620|gb|AFK...   125   4e-27

>ref|XP_003609353.1| YABBY protein [Medicago truncatula] gi|355510408|gb|AES91550.1|
           YABBY protein [Medicago truncatula]
          Length = 191

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/79 (73%), Positives = 67/79 (84%)
 Frame = +2

Query: 2   PSSTAKEASITSRPPGKRPRVPSAYNQFIKEEVQRIKANNPDISHRQAFSVAAKNWAHFP 181
           P++   E  + +RPP KR RVPSAYNQFIKEE+QRIKANNPDISHR+AFS AAKNWAHFP
Sbjct: 99  PTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFP 158

Query: 182 HIQFGLMLEANNKAEINEV 238
           HI FGLMLE+NN+A+I  V
Sbjct: 159 HIHFGLMLESNNQAQIENV 177


>ref|XP_002285328.1| PREDICTED: axial regulator YABBY 5 [Vitis vinifera]
           gi|297738980|emb|CBI28225.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = +2

Query: 2   PSSTAKEASITSRPPGKRPRVPSAYNQFIKEEVQRIKANNPDISHRQAFSVAAKNWAHFP 181
           P+S   E  I +RPP KR RVPSAYNQFIKEE+QRIKANNPDISHR+AFS AAKNWAHFP
Sbjct: 93  PASNISEERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFP 152

Query: 182 HIQFGLMLEANNKAEINE 235
           HI FGLMLE NN+ +++E
Sbjct: 153 HIHFGLMLETNNQPKLDE 170


>ref|NP_001238347.1| uncharacterized protein LOC100499942 [Glycine max]
           gi|255627893|gb|ACU14291.1| unknown [Glycine max]
          Length = 186

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/93 (65%), Positives = 73/93 (78%), Gaps = 7/93 (7%)
 Frame = +2

Query: 2   PSSTAKEASITSRPPGKRPRVPSAYNQFIKEEVQRIKANNPDISHRQAFSVAAKNWAHFP 181
           P++   E  + +RPP KR RVPSAYNQFIKEE+QRIKANNPDISHR+AFS AAKNWAHFP
Sbjct: 94  PTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFP 153

Query: 182 HIQFGLMLEANNKAEINEV-------RTSLLRK 259
           HI FGLMLE+NN+A+++ V       R +LL K
Sbjct: 154 HIHFGLMLESNNQAKMDNVSEKHLMPRAALLNK 186


>ref|XP_002324648.1| predicted protein [Populus trichocarpa] gi|222866082|gb|EEF03213.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/72 (77%), Positives = 66/72 (91%)
 Frame = +2

Query: 29  ITSRPPGKRPRVPSAYNQFIKEEVQRIKANNPDISHRQAFSVAAKNWAHFPHIQFGLMLE 208
           + +RPP KR RVPSAYNQFIKEE+QRIKANNP+ISHR+AFS AAKNWAHFPHIQFGLMLE
Sbjct: 105 VVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIQFGLMLE 164

Query: 209 ANNKAEINEVRT 244
            NN+A++++V T
Sbjct: 165 TNNQAKLDDVST 176


>gb|ACJ85113.1| unknown [Medicago truncatula] gi|388490620|gb|AFK33376.1| unknown
           [Medicago truncatula]
          Length = 191

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = +2

Query: 2   PSSTAKEASITSRPPGKRPRVPSAYNQFIKEEVQRIKANNPDISHRQAFSVAAKNWAHFP 181
           P++   E  + +RPP KR RVPSAYNQFIKEE+QRIK NNPDISHR+AFS AAKNWAHFP
Sbjct: 99  PTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKVNNPDISHREAFSTAAKNWAHFP 158

Query: 182 HIQFGLMLEANNKAEINEV 238
           HI FGLMLE+NN+A+I  V
Sbjct: 159 HIHFGLMLESNNQAKIENV 177


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