BLASTX nr result

ID: Coptis25_contig00017914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017914
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285328.1| PREDICTED: axial regulator YABBY 5 [Vitis vi...   248   2e-63
ref|XP_003542627.1| PREDICTED: axial regulator YABBY 5-like [Gly...   243   7e-62
ref|NP_001238347.1| uncharacterized protein LOC100499942 [Glycin...   243   7e-62
gb|ACU19358.1| unknown [Glycine max]                                  242   1e-61
gb|ADL36869.1| YABBY domain class transcription factor [Malus x ...   238   2e-60

>ref|XP_002285328.1| PREDICTED: axial regulator YABBY 5 [Vitis vinifera]
           gi|297738980|emb|CBI28225.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  248 bits (634), Expect = 2e-63
 Identities = 126/186 (67%), Positives = 143/186 (76%), Gaps = 14/186 (7%)
 Frame = +1

Query: 469 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQS 648
           MSSC  DV ASEQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA QS
Sbjct: 1   MSSC-IDV-ASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQS 58

Query: 649 FSWQELQRQSFPVLDHRID--------------QPSSTAKETSITSCPPGKRPRVPSAYN 786
            SWQ++Q  ++   D+RID               P+S   E  I + PP KR RVPSAYN
Sbjct: 59  LSWQDVQAPNYTSPDYRIDLGSSSKCNTKMAMRAPASNISEERIVNRPPEKRQRVPSAYN 118

Query: 787 QFIKEEIQRIKANHPDISHRQAFSAAAKNWAHFPHIQFGLMLEANNKAEMNEGPAKHLMT 966
           QFIKEEIQRIKAN+PDISHR+AFS AAKNWAHFPHI FGLMLE NN+ +++EG  KHLM+
Sbjct: 119 QFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQPKLDEGSEKHLMS 178

Query: 967 TAALFN 984
            AAL N
Sbjct: 179 KAALRN 184


>ref|XP_003542627.1| PREDICTED: axial regulator YABBY 5-like [Glycine max]
          Length = 186

 Score =  243 bits (620), Expect = 7e-62
 Identities = 122/186 (65%), Positives = 139/186 (74%), Gaps = 14/186 (7%)
 Frame = +1

Query: 469 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQS 648
           MSSCS DV A EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA QS
Sbjct: 1   MSSCSIDV-APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQS 59

Query: 649 FSWQELQRQSFPVLDHRIDQ--------------PSSTAKETSITSCPPGKRPRVPSAYN 786
            SWQ++Q       ++RID               P++   E  + + PP KR RVPSAYN
Sbjct: 60  LSWQDVQGSGHCNPEYRIDTGSTSKCNNRIAMRAPTTHVTEERVVNRPPEKRQRVPSAYN 119

Query: 787 QFIKEEIQRIKANHPDISHRQAFSAAAKNWAHFPHIQFGLMLEANNKAEMNEGPAKHLMT 966
           QFIKEEIQRIKAN+PDISHR+AFS AAKNWAHFPHI FGLMLE+NN+ +M     KHLM+
Sbjct: 120 QFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQVKMENVSEKHLMS 179

Query: 967 TAALFN 984
            AAL N
Sbjct: 180 RAALLN 185


>ref|NP_001238347.1| uncharacterized protein LOC100499942 [Glycine max]
           gi|255627893|gb|ACU14291.1| unknown [Glycine max]
          Length = 186

 Score =  243 bits (620), Expect = 7e-62
 Identities = 123/186 (66%), Positives = 140/186 (75%), Gaps = 14/186 (7%)
 Frame = +1

Query: 469 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQS 648
           MSSCS DV A EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA QS
Sbjct: 1   MSSCSIDV-APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQS 59

Query: 649 FSWQELQRQSFPVLDHRIDQ--------------PSSTAKETSITSCPPGKRPRVPSAYN 786
            SWQ++Q       ++RID               P++   E  + + PP KR RVPSAYN
Sbjct: 60  LSWQDVQGPGQCNPEYRIDTGSTSKCNNRIAMRAPTTHVTEERVVNRPPEKRQRVPSAYN 119

Query: 787 QFIKEEIQRIKANHPDISHRQAFSAAAKNWAHFPHIQFGLMLEANNKAEMNEGPAKHLMT 966
           QFIKEEIQRIKAN+PDISHR+AFS AAKNWAHFPHI FGLMLE+NN+A+M+    KHLM 
Sbjct: 120 QFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQAKMDNVSEKHLMP 179

Query: 967 TAALFN 984
            AAL N
Sbjct: 180 RAALLN 185


>gb|ACU19358.1| unknown [Glycine max]
          Length = 186

 Score =  242 bits (617), Expect = 1e-61
 Identities = 122/186 (65%), Positives = 139/186 (74%), Gaps = 14/186 (7%)
 Frame = +1

Query: 469 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQS 648
           MSSCS DV A EQ+CYIPCNFCNI+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA QS
Sbjct: 1   MSSCSIDV-APEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQS 59

Query: 649 FSWQELQRQSFPVLDHRIDQ--------------PSSTAKETSITSCPPGKRPRVPSAYN 786
            SWQ++Q       ++RID               P++   E  + + PP KR RVPSAYN
Sbjct: 60  LSWQDVQGSGHCNPEYRIDTGSTSKCNNRIAMRAPTTHVTEERVVNRPPEKRQRVPSAYN 119

Query: 787 QFIKEEIQRIKANHPDISHRQAFSAAAKNWAHFPHIQFGLMLEANNKAEMNEGPAKHLMT 966
           QFIKEEIQRIKAN+PDISHR+AFS AAKNWAHFPHI FGLMLE+NN+ +M     KHLM+
Sbjct: 120 QFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQVKMENVFEKHLMS 179

Query: 967 TAALFN 984
            AAL N
Sbjct: 180 RAALLN 185


>gb|ADL36869.1| YABBY domain class transcription factor [Malus x domestica]
          Length = 188

 Score =  238 bits (608), Expect = 2e-60
 Identities = 124/190 (65%), Positives = 145/190 (76%), Gaps = 17/190 (8%)
 Frame = +1

Query: 469 MSSCSTDVSASEQVCYIPCNFCNIMLAVSVPCSSLYDTVTVRCGHCTNLWSVNMAAALQS 648
           M+SC  DV A+EQ+CYIPCNFC+I+LAVSVPCSSL+D VTVRCGHCTNLWSVNMAAA QS
Sbjct: 1   MTSC-VDV-ATEQLCYIPCNFCSIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQS 58

Query: 649 FSWQELQRQSFPV--LDHRIDQPSST---------------AKETSITSCPPGKRPRVPS 777
            SWQ++Q Q++     ++RID  SS+                 E    + PP KR RVPS
Sbjct: 59  PSWQDVQAQNYNYNSQNYRIDLGSSSKCNKKNATRDPTSDHVTEERGVNRPPEKRQRVPS 118

Query: 778 AYNQFIKEEIQRIKANHPDISHRQAFSAAAKNWAHFPHIQFGLMLEANNKAEMNEGPAKH 957
           AYNQFIKEEIQRIKAN+PDISHR+AFS AAKNWAHFPHI FGLMLEANN+A+++  P KH
Sbjct: 119 AYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQAKLDNDPEKH 178

Query: 958 LMTTAALFNN 987
           LM+ AAL NN
Sbjct: 179 LMSRAALLNN 188


Top