BLASTX nr result

ID: Coptis25_contig00017912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017912
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27710.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002270002.1| PREDICTED: uncharacterized protein LOC100242...    62   5e-08
ref|XP_003556412.1| PREDICTED: uncharacterized protein LOC100777...    59   5e-07
ref|XP_003535405.1| PREDICTED: uncharacterized protein LOC100818...    57   2e-06

>emb|CBI27710.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   SSRSGVDVNL--DSNKRKPVTQTNPRTRRKSNNEFDDXXXXXXXXXXXXSKLRANASIQC 175
           SS SG DVN+    NKR+ VTQ++   R++S     D            SK+RA A ++ 
Sbjct: 75  SSGSGDDVNMLDGHNKRQSVTQSSAGRRKRSRKATGDAIVDAMLEIAAASKMRATAIMKS 134

Query: 176 LDQFSITKCVQVLDEISNVDESLYY 250
            D+FSI+KC++VLDE+  VD+ +Y+
Sbjct: 135 EDRFSISKCIKVLDEMQGVDQHVYF 159


>ref|XP_002270002.1| PREDICTED: uncharacterized protein LOC100242635 [Vitis vinifera]
          Length = 145

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   SSRSGVDVNL--DSNKRKPVTQTNPRTRRKSNNEFDDXXXXXXXXXXXXSKLRANASIQC 175
           SS SG DVN+    NKR+ VTQ++   R++S     D            SK+RA A ++ 
Sbjct: 19  SSGSGDDVNMLDGHNKRQSVTQSSAGRRKRSRKATGDAIVDAMLEIAAASKMRATAIMKS 78

Query: 176 LDQFSITKCVQVLDEISNVDESLYY 250
            D+FSI+KC++VLDE+  VD+ +Y+
Sbjct: 79  EDRFSISKCIKVLDEMQGVDQHVYF 103


>ref|XP_003556412.1| PREDICTED: uncharacterized protein LOC100777086 [Glycine max]
          Length = 130

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   SSRSGVDVN-LDSNKRKPVT-QTNPRTRRKSNNEFDDXXXXXXXXXXXXSKLRANASIQC 175
           +S SG DV+ LD +KR PV   +  R R++S     D            SK+RA A ++ 
Sbjct: 9   TSGSGEDVHMLDGHKRHPVVVPSGSRGRKQSRKANGDAIVDAMLEIAAASKMRATAILKN 68

Query: 176 LDQFSITKCVQVLDEISNVDESLYY 250
            D+FSI+KC++VLDE+  VDE LY+
Sbjct: 69  EDRFSISKCIKVLDELQGVDERLYF 93


>ref|XP_003535405.1| PREDICTED: uncharacterized protein LOC100818885 [Glycine max]
          Length = 130

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   SSRSGVDVN-LDSNKRKPVT-QTNPRTRRKSNNEFDDXXXXXXXXXXXXSKLRANASIQC 175
           +S SG DV+ L+ +KR PV   +    R++S     D            SK+RANA ++ 
Sbjct: 9   TSGSGEDVHTLEGHKRHPVVVPSGSGGRKRSRKANGDAIVDAMLEIAAASKMRANAILKN 68

Query: 176 LDQFSITKCVQVLDEISNVDESLYY 250
            D+FSI+KC++VLDE+  VDE LY+
Sbjct: 69  EDRFSISKCIKVLDELQGVDERLYF 93


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