BLASTX nr result

ID: Coptis25_contig00017888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017888
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512752.1| conserved hypothetical protein [Ricinus comm...    97   1e-18
ref|XP_002303864.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002297677.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002272318.1| PREDICTED: uncharacterized protein LOC100246...    92   3e-17
ref|XP_003531751.1| PREDICTED: uncharacterized protein LOC100807...    92   4e-17

>ref|XP_002512752.1| conserved hypothetical protein [Ricinus communis]
           gi|223547763|gb|EEF49255.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/66 (74%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -3

Query: 420 DREINGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV- 244
           DREI+GLNEQLE+DAR + HLQ+QLLQERSKRA+VERENT+LQ+QV+MLMNMLQ+ E + 
Sbjct: 159 DREIDGLNEQLEEDARCLEHLQVQLLQERSKRAEVERENTMLQDQVTMLMNMLQDNEPMG 218

Query: 243 DEGTDD 226
           DEG  D
Sbjct: 219 DEGAGD 224


>ref|XP_002303864.1| predicted protein [Populus trichocarpa] gi|222841296|gb|EEE78843.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/66 (71%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 420 DREINGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV- 244
           DREI+GLNEQLE+DAR + HLQLQLLQE+SKR +VEREN +LQ+Q+SMLMNMLQE E++ 
Sbjct: 149 DREIDGLNEQLEEDARCLEHLQLQLLQEKSKRTEVERENAMLQDQISMLMNMLQENEQLG 208

Query: 243 DEGTDD 226
           DE   D
Sbjct: 209 DEDVGD 214


>ref|XP_002297677.1| predicted protein [Populus trichocarpa] gi|222844935|gb|EEE82482.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/71 (66%), Positives = 59/71 (83%), Gaps = 6/71 (8%)
 Frame = -3

Query: 420 DREINGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV- 244
           DREI+GLNEQLE+DAR + HLQLQLLQE+SKRA+VEREN +LQ+Q+SMLMN+LQE E + 
Sbjct: 150 DREIDGLNEQLEEDARCLEHLQLQLLQEKSKRAEVERENAMLQDQISMLMNVLQENEPMG 209

Query: 243 -----DEGTDD 226
                +EG D+
Sbjct: 210 DEDLGNEGPDE 220


>ref|XP_002272318.1| PREDICTED: uncharacterized protein LOC100246715 [Vitis vinifera]
           gi|147792903|emb|CAN68795.1| hypothetical protein
           VITISV_016175 [Vitis vinifera]
           gi|298204768|emb|CBI25266.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/66 (71%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
 Frame = -3

Query: 420 DREINGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEVD 241
           DREINGLN QLEDDAR + HLQ+QLLQERSKRA+VEREN +L++Q+SMLMNMLQE E ++
Sbjct: 135 DREINGLNGQLEDDARCLEHLQVQLLQERSKRAEVERENLMLKDQLSMLMNMLQEQEAME 194

Query: 240 -EGTDD 226
            E T++
Sbjct: 195 NESTEE 200


>ref|XP_003531751.1| PREDICTED: uncharacterized protein LOC100807988 [Glycine max]
          Length = 210

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/66 (69%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 420 DREINGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV- 244
           DREI+GLNEQLE+D+R + HLQLQL+ E+SKRA VEREN +LQ QV+MLMNMLQE E++ 
Sbjct: 144 DREIDGLNEQLEEDSRCLEHLQLQLVDEKSKRARVERENAMLQEQVNMLMNMLQEAEQMG 203

Query: 243 DEGTDD 226
           DEG D+
Sbjct: 204 DEGPDE 209


Top