BLASTX nr result

ID: Coptis25_contig00017877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017877
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284121.1| PREDICTED: auxin-induced protein 22D [Vitis ...   259   1e-72
ref|XP_002279955.1| PREDICTED: auxin-induced protein 22D [Vitis ...   251   2e-70
ref|XP_002517024.1| Auxin-responsive protein IAA4, putative [Ric...   245   6e-69
emb|CAN74317.1| hypothetical protein VITISV_013837 [Vitis vinifera]   245   2e-68
gb|AFZ78615.1| hypothetical protein [Populus tomentosa]               238   7e-66

>ref|XP_002284121.1| PREDICTED: auxin-induced protein 22D [Vitis vinifera]
           gi|297737155|emb|CBI26356.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score =  259 bits (661), Expect(2) = 1e-72
 Identities = 126/175 (72%), Positives = 140/175 (80%)
 Frame = +2

Query: 212 METVAKYEGDLNLKATELRLGLPGVEDFEKQKTPIVRNNKRALVETGDDCGSNNNSDISD 391
           ME    YE DLNLKATELRLGLPG ++ EK+    VRNNKRA  +T D+CGS  +S+   
Sbjct: 1   MEGAVAYESDLNLKATELRLGLPGRDEAEKEALSGVRNNKRASPDTSDECGSKGSSN--- 57

Query: 392 ARDRDLETAPAAKQQVVGWPPVRSYRKNSFQSKKTEVETSGMYVKVSMDGAPYLRKIDLK 571
               D E APA K QVVGWPP+RS+RKNSFQ KKTE E +GM+VKVSMDGAPYLRKIDLK
Sbjct: 58  ---GDRENAPATKAQVVGWPPIRSFRKNSFQPKKTEAEAAGMFVKVSMDGAPYLRKIDLK 114

Query: 572 IYKGYPELLKALMAMFKFTIGQYSESEGYNGSEYVPTYEDKDGDWMLVGDVPWEM 736
           +YKGYPELL+AL  MFKFTIG YSE EGY GSEYVPTYEDKDGDWMLVGDVPW+M
Sbjct: 115 VYKGYPELLQALQNMFKFTIGDYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWDM 169



 Score = 42.0 bits (97), Expect(2) = 1e-72
 Identities = 18/24 (75%), Positives = 22/24 (91%)
 Frame = +1

Query: 802 EMFISSCKRLRIMKGSEAKGLALG 873
           +MF+SSCKRLRIMKGS+A+GL  G
Sbjct: 168 DMFMSSCKRLRIMKGSDARGLGCG 191


>ref|XP_002279955.1| PREDICTED: auxin-induced protein 22D [Vitis vinifera]
           gi|298204847|emb|CBI34154.3| unnamed protein product
           [Vitis vinifera]
          Length = 199

 Score =  251 bits (642), Expect(2) = 2e-70
 Identities = 124/176 (70%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
 Frame = +2

Query: 212 METVAKYEGDLNLKATELRLGLPGVEDFEKQKTPIVR-NNKRALVETGDDCGSNNNSDIS 388
           ME    YE DLNL+ATELRLGLPG +  EKQ  P ++ +NKRAL +  ++ GS NNS +S
Sbjct: 1   MENKVIYEKDLNLEATELRLGLPGTKKPEKQAPPSLKTSNKRALPDMNEESGSGNNSSVS 60

Query: 389 DARDRDLETAPAAKQQVVGWPPVRSYRKNSFQSKKTEVETSGMYVKVSMDGAPYLRKIDL 568
           D      ETAPA K QVVGWPPVRSYRK+ FQ KKTE E    Y+KVSMDGAPYLRKIDL
Sbjct: 61  DDGKSHRETAPAPKAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAPYLRKIDL 120

Query: 569 KIYKGYPELLKALMAMFKFTIGQYSESEGYNGSEYVPTYEDKDGDWMLVGDVPWEM 736
           K+YKGYPELLKAL  MFKF++GQYSE EGYNGSEY PTYEDKDGDWMLVGDVPW M
Sbjct: 121 KVYKGYPELLKALEEMFKFSVGQYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNM 176



 Score = 41.6 bits (96), Expect(2) = 2e-70
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +1

Query: 805 MFISSCKRLRIMKGSEAKGL 864
           MFISSCKRLRIMKGSEA+GL
Sbjct: 176 MFISSCKRLRIMKGSEARGL 195


>ref|XP_002517024.1| Auxin-responsive protein IAA4, putative [Ricinus communis]
           gi|223543659|gb|EEF45187.1| Auxin-responsive protein
           IAA4, putative [Ricinus communis]
          Length = 191

 Score =  245 bits (625), Expect(2) = 6e-69
 Identities = 124/176 (70%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
 Frame = +2

Query: 212 METVAKYEGDLNLKATELRLGLPGVEDFEKQKT-PIVRNNKRALVETGDDCGSNNNSDIS 388
           ME    YE DLNLKATELRLGLPG E  E+Q      RNNKR L ET D+CG    SD +
Sbjct: 1   MEGAVAYENDLNLKATELRLGLPGTERNEEQAALSCTRNNKRPLPETRDECGEKA-SDYT 59

Query: 389 DARDRDLETAPAAKQQVVGWPPVRSYRKNSFQSKKTEVETSGMYVKVSMDGAPYLRKIDL 568
                  ETAP  K Q+VGWPPVRSYRKN+ Q+K+TE E+SG YVKVSMDGAPYLRKIDL
Sbjct: 60  -------ETAPPPKAQIVGWPPVRSYRKNNLQTKQTEAESSGRYVKVSMDGAPYLRKIDL 112

Query: 569 KIYKGYPELLKALMAMFKFTIGQYSESEGYNGSEYVPTYEDKDGDWMLVGDVPWEM 736
           K+YKGY ELLKAL +MFKFTIG+YSE EGY GSEY PTYEDKDGDWMLVGDVPW+M
Sbjct: 113 KVYKGYKELLKALQSMFKFTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDM 168



 Score = 43.5 bits (101), Expect(2) = 6e-69
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +1

Query: 802 EMFISSCKRLRIMKGSEAKGLALGL 876
           +MF+SSCKRLRIMKGSEA+GL  G+
Sbjct: 167 DMFMSSCKRLRIMKGSEARGLGCGV 191


>emb|CAN74317.1| hypothetical protein VITISV_013837 [Vitis vinifera]
          Length = 206

 Score =  245 bits (625), Expect(2) = 2e-68
 Identities = 124/183 (67%), Positives = 138/183 (75%), Gaps = 8/183 (4%)
 Frame = +2

Query: 212 METVAKYEGDLNLKATELRLGLPGVEDFEKQKTPIVR-NNKRALVETGDDCGSNNNSDIS 388
           ME    YE DLNL+ATELRLGLPG +  EKQ  P ++ +NKRAL +  ++ GS NNS +S
Sbjct: 1   MENKVIYEKDLNLEATELRLGLPGTKKPEKQAPPSLKTSNKRALPDMNEESGSGNNSSVS 60

Query: 389 DARDRDLETAPAAKQ-------QVVGWPPVRSYRKNSFQSKKTEVETSGMYVKVSMDGAP 547
           D      ETAPA K        QVVGWPPVRSYRK+ FQ KKTE E    Y+KVSMDGAP
Sbjct: 61  DDGKSHRETAPAPKNAVYNYRAQVVGWPPVRSYRKSCFQPKKTEAEEGRTYLKVSMDGAP 120

Query: 548 YLRKIDLKIYKGYPELLKALMAMFKFTIGQYSESEGYNGSEYVPTYEDKDGDWMLVGDVP 727
           YLRKIDLK+YKGYPELLKAL  MFKF++GQYSE EGYNGSEY PTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLKVYKGYPELLKALEEMFKFSVGQYSEREGYNGSEYAPTYEDKDGDWMLVGDVP 180

Query: 728 WEM 736
           W M
Sbjct: 181 WNM 183



 Score = 41.6 bits (96), Expect(2) = 2e-68
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +1

Query: 805 MFISSCKRLRIMKGSEAKGL 864
           MFISSCKRLRIMKGSEA+GL
Sbjct: 183 MFISSCKRLRIMKGSEARGL 202


>gb|AFZ78615.1| hypothetical protein [Populus tomentosa]
          Length = 196

 Score =  238 bits (606), Expect(2) = 7e-66
 Identities = 121/176 (68%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
 Frame = +2

Query: 212 METVAKYEGDLNLKATELRLGLPGVEDFEKQKTPIVRNNKRALVETGDDCGSNNNSDISD 391
           ME    YE DLNLKATELRLGLPG     ++     R NKR   ET ++ G+N  SD   
Sbjct: 1   MEVGVAYENDLNLKATELRLGLPGTGCTNEKGVSGARTNKRPFPETREEGGANGKSD--- 57

Query: 392 ARDRDLETAPAAKQQVVGWPPVRSYRKNSFQSKKTEVETS-GMYVKVSMDGAPYLRKIDL 568
           A+  D ETA A K Q+VGWPP+RSYRKNSFQ KK E E + GMYVKVSMDGAPYLRKIDL
Sbjct: 58  AQHDDQETASAPKVQIVGWPPIRSYRKNSFQPKKAEDEAAAGMYVKVSMDGAPYLRKIDL 117

Query: 569 KIYKGYPELLKALMAMFKFTIGQYSESEGYNGSEYVPTYEDKDGDWMLVGDVPWEM 736
           K+YKGYPELLKAL  MFK TIG+YSE EGY GSEY PTYEDKDGDWMLVGDVPW+M
Sbjct: 118 KVYKGYPELLKALENMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDM 173



 Score = 40.4 bits (93), Expect(2) = 7e-66
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 802 EMFISSCKRLRIMKGSEAKGLALG 873
           +MF+SSCK+LRIMKGSEA GL  G
Sbjct: 172 DMFLSSCKKLRIMKGSEAIGLGCG 195


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