BLASTX nr result
ID: Coptis25_contig00017859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00017859
(1957 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 171 9e-40
emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera] 171 9e-40
ref|XP_002514013.1| transcription factor, putative [Ricinus comm... 165 5e-38
ref|XP_002306548.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-30
ref|XP_002302331.1| predicted protein [Populus trichocarpa] gi|2... 136 2e-29
>ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
[Vitis vinifera]
Length = 421
Score = 171 bits (432), Expect = 9e-40
Identities = 127/350 (36%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Frame = -2
Query: 1764 PGVAVPVLPTLKSQ-GNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRID 1588
PG P L TL + G E Q+ + NP +V T+ SL+ LP+ + SQ +
Sbjct: 71 PGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNE 130
Query: 1587 ERKWFYCVPHHCKTGNPAALNTVVQEKLSTPC--NSGVNATSNMVPGSVQKEFFVLDQSG 1414
WFYC+P + A+ N++++EKL NS V N++ QK F V DQSG
Sbjct: 131 PHGWFYCLPRFRQAFTHAS-NSILKEKLPAGPYGNSRVVNAPNVISECAQKRFLVFDQSG 189
Query: 1413 NRGNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDL-NHPWPVIYDELDENGKA 1237
++ L+ S+IG+ Q L A L E KRDL H P++ DE +ENG
Sbjct: 190 DQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGT 249
Query: 1236 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTVFYNKREEMEGSTDEVTS 1066
+ T HSPS +TV Y+++E +EG +EV S
Sbjct: 250 DVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTV-YDRQEWLEGEAEEVAS 308
Query: 1065 SFCATKRKRLADEE---SLLGDTASSFT-----KCEDDAQSSCFSGKTE--GEPYCLEAN 916
S + KR++L + + L DTASS + EDDA+SSC G GE N
Sbjct: 309 SDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 368
Query: 915 KHLRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 766
K R++RI +T+NILQ++IPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 369 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALGL 418
>emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
Length = 402
Score = 171 bits (432), Expect = 9e-40
Identities = 127/350 (36%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Frame = -2
Query: 1764 PGVAVPVLPTLKSQ-GNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRID 1588
PG P L TL + G E Q+ + NP +V T+ SL+ LP+ + SQ +
Sbjct: 52 PGWLSPDLNTLSAPLGLELEQQNIISAYMNPCPNLVPTSGSLTAHTFSVLPHSRPSQPNE 111
Query: 1587 ERKWFYCVPHHCKTGNPAALNTVVQEKLSTPC--NSGVNATSNMVPGSVQKEFFVLDQSG 1414
WFYC+P + A+ N++++EKL NS V N++ QK F V DQSG
Sbjct: 112 PHGWFYCLPRFRQAFTHAS-NSILKEKLPAGPYGNSRVVNAPNVISECAQKRFLVFDQSG 170
Query: 1413 NRGNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDL-NHPWPVIYDELDENGKA 1237
++ L+ S+IG+ Q L A L E KRDL H P++ DE +ENG
Sbjct: 171 DQTTLVFSSVIGTPGQCLTSWSPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGT 230
Query: 1236 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTVFYNKREEMEGSTDEVTS 1066
+ T HSPS +TV Y+++E +EG +EV S
Sbjct: 231 DVQSEMHEDTEELNALLYSDDEYSYSEDDEETSTGHSPSTMTV-YDRQEWLEGEAEEVAS 289
Query: 1065 SFCATKRKRLADEE---SLLGDTASSFT-----KCEDDAQSSCFSGKTE--GEPYCLEAN 916
S + KR++L + + L DTASS + EDDA+SSC G GE N
Sbjct: 290 SDGSNKRRKLFNGDFNVPSLMDTASSAKPDNSLEYEDDAESSCADGNNPEPGEIQSFSGN 349
Query: 915 KHLRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 766
K R++RI +T+NILQ++IPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 350 KRSRKDRIRETVNILQSLIPGGKGKDAIVVLDEAIHYLKSLKLKAKALGL 399
>ref|XP_002514013.1| transcription factor, putative [Ricinus communis]
gi|223547099|gb|EEF48596.1| transcription factor,
putative [Ricinus communis]
Length = 424
Score = 165 bits (417), Expect = 5e-38
Identities = 133/409 (32%), Positives = 187/409 (45%), Gaps = 17/409 (4%)
Frame = -2
Query: 1941 IGDCFDWMEKDSRSRLHQQSTLWQSPNLDYTSTLSYLGQGKPFLALNPSASMTYANGSLP 1762
+GDCF WM +D S +Q WQS NL+Y G PF
Sbjct: 55 LGDCFGWMGEDWGSCYPRQQFDWQSSNLNYL--------GAPF----------------- 89
Query: 1761 GVAVPVLPTLKSQGNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRIDER 1582
N E R + NP +VS +L S PY ++Q +
Sbjct: 90 --------------NVEHH-RTIPSVMNPGSDMVSIKGTLPAYPSFDPPYSFVAQANEPH 134
Query: 1581 KWFYCVPHHCKTGNPAALNTVVQEKLSTPCNSGVNA--TSNMVPGSVQKEFFVLDQSGNR 1408
WFYC+P P+ LN+ +E+L N T + G QK F V DQSG++
Sbjct: 135 GWFYCLPRFRHAFAPS-LNSGFKERLPAAANGNNKEVFTPKVESGCSQKRFLVFDQSGDQ 193
Query: 1407 GNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDLN-HPWPVIYDELDENGKANX 1231
LI S IG+ AC L++++ K +LN H + D+L EN A+
Sbjct: 194 TTLIFSSGIGTPVPGFTSWGRKPTGACNLKREDPGTKENLNIHLRAIAPDQLGENDGADL 253
Query: 1230 XXXXXXXXXXXXXXXXXXXXXXXXXXXS---TAHSPSELTVFYNKREEMEGSTDEVTSSF 1060
T HSPS +T +N ++ +GST+EV SS
Sbjct: 254 QSEMHEDTDELNALLYSDDDSDYTEDDEVTSTGHSPSTMTA-HNNQDWFKGSTEEVASSG 312
Query: 1059 CATKRKRLAD----EESLLGDTASSFT-----KCEDDAQSSCFSGK--TEGEPYCLEANK 913
+TK+++L D + L DTA+S + E+DA+S C G E +NK
Sbjct: 313 GSTKKRKLFDGGFSDVPALMDTANSVKPVISFEYENDAESRCDDGLYWASSEMGSESSNK 372
Query: 912 HLRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 766
+R+E+I DT+NILQNIIPGGKGKDA+V+LDEA+ YL+ LK KA++LG+
Sbjct: 373 KMRKEKIRDTVNILQNIIPGGKGKDAIVVLDEAIGYLKSLKVKAKALGL 421
>ref|XP_002306548.1| predicted protein [Populus trichocarpa] gi|222855997|gb|EEE93544.1|
predicted protein [Populus trichocarpa]
Length = 365
Score = 139 bits (350), Expect = 3e-30
Identities = 122/408 (29%), Positives = 182/408 (44%), Gaps = 23/408 (5%)
Frame = -2
Query: 1920 MEKDSRSRLHQQSTLWQSPNLDYTSTLSYLGQGKPF-LALNPSASMTYANGSLPGVAVPV 1744
M +D S QQ WQSPN +Y GQ L ++P+ +M + NG + P
Sbjct: 1 MGEDWGSLFPQQRFNWQSPNSNYLDASLAFGQQNTLPLLMDPNTNMVFTNG----IGYPF 56
Query: 1743 LPTLKSQGNEERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRIDERKWFYCV 1564
L SQ ++E + R WF+ +
Sbjct: 57 TELLPSQASQEN---------------------------------------EPRGWFHGL 77
Query: 1563 PHHCKTGNPAA----------LNTVVQEKLST-PCNSGVNATSNMVPGSVQKEFFVLDQS 1417
PH + P + L+TV++EKL T P ++ + V G QK V DQS
Sbjct: 78 PHFRQALMPPSNSVHKERRPRLDTVLKEKLPTAPHDNKEDNMPKAVSGCDQKRLLVFDQS 137
Query: 1416 GNRGNLILHSLIGSSSQNLNLARATDINACGLRQKELEAKRDLNHPWPVIYDELDENGKA 1237
G++ LI S +G+ Q L L ++ AK H P+ DE E+
Sbjct: 138 GDQTTLIFSSGVGTPVQCLKSWIPKPTVGFDLNREIPGAKGQNFHLGPIANDEFVEDDGI 197
Query: 1236 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAHSPSELTVFYNKREEMEGSTDEVTSSFC 1057
+ T HSPS +T +++R+ +GS +EV SS
Sbjct: 198 DMHEDTEELNALLYSDDGSVCSEDEVTS--TGHSPSTMTT-HDRRDWFDGSAEEVASSNG 254
Query: 1056 ATKRKRLAD----EESLLGDTASSF--TKC---EDDAQSSCFSGKTE--GEPYCLEANKH 910
+ K+++L D + L DTA+S T+C E+D +S C +G E NK
Sbjct: 255 SNKKRKLFDGGYTDAPSLKDTATSVKPTRCFGHEEDVESRCDNGTNSLSHEMGSESGNKR 314
Query: 909 LRRERICDTMNILQNIIPGGKGKDAVVILDEAVQYLRFLKHKAESLGV 766
+R+E I +TM+ILQN+IPGGKGKDA+V+L+EA+QYL+ LK KA++LG+
Sbjct: 315 MRKENIRETMSILQNLIPGGKGKDAIVVLEEAIQYLKSLKFKAKALGL 362
>ref|XP_002302331.1| predicted protein [Populus trichocarpa] gi|222844057|gb|EEE81604.1|
predicted protein [Populus trichocarpa]
Length = 368
Score = 136 bits (342), Expect = 2e-29
Identities = 124/391 (31%), Positives = 180/391 (46%), Gaps = 16/391 (4%)
Frame = -2
Query: 1890 QQSTLWQSPNLDYTSTLSYLGQ-GKPFLALNPSASMTYANGSLPGVAVPVLPTLKSQGNE 1714
QQ WQSP+ +Y GQ P L ++P+ +M NG LP P L+SQ +
Sbjct: 8 QQQFNWQSPDTNYLGASFSSGQQNNPPLLMDPNVNMISTNG-LP--EYPFAELLRSQVGQ 64
Query: 1713 ERQKRLFQPLTNPYGCVVSTNESLSVMESLGLPYFKISQRIDERKWFYCVPHHCKTGNPA 1534
E + R + GLP F R+ F H
Sbjct: 65 ENEPRGW---------------------FYGLPRF--------RQAFMPPFHSVLKEKRP 95
Query: 1533 ALNTVVQEKLSTPCNSGVNATSNMVPGSVQKEFFVLDQSGNRGNLILHSLIGSSSQNLNL 1354
L+TV++EKL T + G QK F V DQSG++ LI S IG+ +Q L
Sbjct: 96 LLDTVLKEKLPTAPREIKDIVPQSDSGRAQKRFLVFDQSGDQTTLIFSSGIGTPAQCLKS 155
Query: 1353 ARATDINACGLRQKELEAKRDLN-HPWPVIYDELDENG---KANXXXXXXXXXXXXXXXX 1186
A L ++ AK + + H P+ DE E+
Sbjct: 156 WIPKPTIAFDLNKEVTGAKENQSFHLGPISTDEFVEDDGIEMQTDVHEDIEELNALLYSD 215
Query: 1185 XXXXXXXXXXXXSTAHSPSELTVFYNKREEMEGSTDEVTSSFCATKRKRLADEESLLG-- 1012
ST HSP+ +T ++KR+ +GST++V SS + K+++L D + G
Sbjct: 216 DDSDYTEDEEVTSTGHSPNTMTT-HDKRDWFDGSTEDVASSDGSNKKRKLFDGGYIDGPS 274
Query: 1011 --DTASSFT-----KCEDDAQSSCFSGKT--EGEPYCLEANKHLRRERICDTMNILQNII 859
DTA S + EDDA+S C +G E NK +R+ERI +T++ILQN+I
Sbjct: 275 LMDTARSVKPTRDFEYEDDAESRCDNGTNLMSEEMGSESVNKRMRKERIRETVSILQNLI 334
Query: 858 PGGKGKDAVVILDEAVQYLRFLKHKAESLGV 766
PGGKGKDAV++L+EA+QYL+ LK +A++LG+
Sbjct: 335 PGGKGKDAVIVLEEAIQYLKSLKFEAKALGL 365