BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017856
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21383.3| unnamed protein product [Vitis vinifera]              303   5e-80
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247...   303   5e-80
ref|XP_003611682.1| RNA-binding protein with multiple splicing [...   270   9e-70
ref|XP_002310126.1| predicted protein [Populus trichocarpa] gi|2...   263   6e-68
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]                          261   3e-67

>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  303 bits (777), Expect = 5e-80
 Identities = 163/279 (58%), Positives = 192/279 (68%), Gaps = 5/279 (1%)
 Frame = -3

Query: 1319 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 1140
            P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 56   PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 115

Query: 1139 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSD 960
            ++P+ FAVFLDQ SA+AAM ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 116  SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 174

Query: 959  KKFRGSAAYSNFHDTXXXXXXXXXXXXXXXXXXXXXXXXSHG-YDSGVAEGAESRRMKSS 783
            KK +GSA +S   D+                        SHG +D        ++   SS
Sbjct: 175  KKVKGSAGFSRPPDSGVGSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNSS 234

Query: 782  TPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIA 603
             PY PQN+TPCPTLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQD  
Sbjct: 235  APYFPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTP 294

Query: 602  CSTAALNSVQDMILYTS-NGEGMRLEYAKSRMG---KPK 498
            CST ALN +Q  +LY+S  GEGMR+EYAKSRMG   KPK
Sbjct: 295  CSTGALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRKPK 333


>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
          Length = 336

 Score =  303 bits (777), Expect = 5e-80
 Identities = 163/279 (58%), Positives = 192/279 (68%), Gaps = 5/279 (1%)
 Frame = -3

Query: 1319 PQNAPIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEH 1140
            P   P  S+    Y     D++RTLF+AGLPEDV+ REIYNLFREFPGYESS LR  +++
Sbjct: 59   PPPPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQN 118

Query: 1139 NKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSD 960
            ++P+ FAVFLDQ SA+AAM ALNG+VFDLEK STLYI LAKSNS+SKRSR DD   G  D
Sbjct: 119  SQPFAFAVFLDQQSAIAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRADDERPG-LD 177

Query: 959  KKFRGSAAYSNFHDTXXXXXXXXXXXXXXXXXXXXXXXXSHG-YDSGVAEGAESRRMKSS 783
            KK +GSA +S   D+                        SHG +D        ++   SS
Sbjct: 178  KKVKGSAGFSRPPDSGVGSVHMPGMGNSAYSMIGYPSTQSHGNFDGRALNETPAKLNNSS 237

Query: 782  TPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIA 603
             PY PQN+TPCPTLFVANLGPTC+EQELI++FSRC GFLKLKMQ+  G PVAFVDFQD  
Sbjct: 238  APYFPQNATPCPTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTP 297

Query: 602  CSTAALNSVQDMILYTS-NGEGMRLEYAKSRMG---KPK 498
            CST ALN +Q  +LY+S  GEGMR+EYAKSRMG   KPK
Sbjct: 298  CSTGALNHLQGTVLYSSPAGEGMRIEYAKSRMGLRRKPK 336


>ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
            gi|355513017|gb|AES94640.1| RNA-binding protein with
            multiple splicing [Medicago truncatula]
          Length = 340

 Score =  270 bits (689), Expect = 9e-70
 Identities = 159/298 (53%), Positives = 191/298 (64%), Gaps = 23/298 (7%)
 Frame = -3

Query: 1319 PQNAPIPSHHNQYYGDQF-------YD-----------DLRTLFVAGLPEDVETREIYNL 1194
            P  AP+P  H+ +   Q+       YD           D+RTLF+AGLPEDV+ REIYNL
Sbjct: 42   PPGAPLPPPHHPHPHPQYIPQQQQVYDSYVPSPLASTNDVRTLFIAGLPEDVKPREIYNL 101

Query: 1193 FREFPGYESSKLRRATEHNKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKS 1014
            FREFPGYESS LR     ++ + FAVF +Q SA+ A+ ALNG++FDLEK STLYI LAKS
Sbjct: 102  FREFPGYESSHLRSPNNSSQAFAFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKS 161

Query: 1013 NSKSKRSRTDDGASGSSDKKFRGSAAYSNFHDTXXXXXXXXXXXXXXXXXXXXXXXX--S 840
            NS++KR+R DD  + SSDKK RGSA+     D+                          S
Sbjct: 162  NSRAKRARIDDDRA-SSDKKARGSASSWPTPDSGVSSIHMPGMGNPAFNTNMIGYPPAQS 220

Query: 839  HGYDSGVA--EGAESRRMKSSTPYIPQNSTPCPTLFVANLGPTCAEQELIEVFSRCTGFL 666
            HG   G A  +G      K S PYIP N+TPC TLFVANLGP+C EQELI+VFSR  GFL
Sbjct: 221  HGIADGNAMHDGLFLNLKKCSNPYIPTNTTPCATLFVANLGPSCNEQELIQVFSRFPGFL 280

Query: 665  KLKMQNKNGAPVAFVDFQDIACSTAALNSVQDMILYTS-NGEGMRLEYAKSRMGKPKK 495
            KLKMQ+  GAPV+FVDF+DI  +T ALNS+Q  ILY+S  GEGMRLEYAKSRMG  +K
Sbjct: 281  KLKMQSTYGAPVSFVDFKDIPSATVALNSLQGTILYSSPAGEGMRLEYAKSRMGMRRK 338


>ref|XP_002310126.1| predicted protein [Populus trichocarpa] gi|222853029|gb|EEE90576.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  263 bits (673), Expect = 6e-68
 Identities = 152/282 (53%), Positives = 185/282 (65%), Gaps = 7/282 (2%)
 Frame = -3

Query: 1319 PQNAPIPSHHNQYYGDQFY---DDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRA 1149
            P   P P+    Y     Y   D +RTLFVAGLP+D++ RE+YNLFREFPGYESS LR  
Sbjct: 48   PHPQPPPAPFVSYVSVPAYVPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTP 107

Query: 1148 TEHNKPYGFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASG 969
            +++++P+ FA F DQPSAVAAM ALNG+VFDLEK STLYI LAKSNS+SKRSRTDD  S 
Sbjct: 108  SQNSQPFAFATFTDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWS- 166

Query: 968  SSDKKFRGSAAYSNFHDTXXXXXXXXXXXXXXXXXXXXXXXXSHGYDSGVAEGAESRRMK 789
            S DKK R S+ +S                             + G+ S  + G+   R +
Sbjct: 167  SLDKKARVSSGFS-------MGTPDSGFGSVHLPGMANSAFNTIGFPSAQSPGSIDDRSR 219

Query: 788  SSTPYIPQNST---PCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVD 618
            + +     N++   PCPTLFVANLG  C E+ELI+VFSRC GFLKLKMQ+  GAPVAFVD
Sbjct: 220  NESKAGRMNNSSAPPCPTLFVANLGQNCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVD 279

Query: 617  FQDIACSTAALNSVQDMILYTS-NGEGMRLEYAKSRMGKPKK 495
            FQD A ST ALN +Q  +LY+S  GEG+RLEYAKSRMG  +K
Sbjct: 280  FQDTASSTGALNHLQGTVLYSSVAGEGLRLEYAKSRMGMRRK 321


>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
          Length = 316

 Score =  261 bits (667), Expect = 3e-67
 Identities = 149/264 (56%), Positives = 172/264 (65%), Gaps = 3/264 (1%)
 Frame = -3

Query: 1307 PIPSHHNQYYGDQFYDDLRTLFVAGLPEDVETREIYNLFREFPGYESSKLRRATEHNKPY 1128
            P  S+   Y     +D +RTLFVAGLP+DV+ REIYNLFREFPGYESS LR  T+ ++P+
Sbjct: 58   PFTSYPPSYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPF 117

Query: 1127 GFAVFLDQPSAVAAMQALNGLVFDLEKKSTLYISLAKSNSKSKRSRTDDGASGSSDKKFR 948
             FA F+DQPSAVAAM ALNG+VFDLEK STLYI LAKSNS+SKRSR+DD  SG   +   
Sbjct: 118  AFATFIDQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRSDDEWSGLDKRVKA 177

Query: 947  GSAAYSNFHDTXXXXXXXXXXXXXXXXXXXXXXXXSHG-YDSGVA-EGAESRRMKSSTPY 774
              A      D+                        SHG +DS  A E   +    SS P 
Sbjct: 178  SPATPGGSLDSGFGSVHLPGMSNSAYNMIGYTSPQSHGIFDSRAASEPTGANSSNSSAP- 236

Query: 773  IPQNSTPCPTLFVANLGPTCAEQELIEVFSRCTGFLKLKMQNKNGAPVAFVDFQDIACST 594
                  PCPTLFVANLGP C EQELI+VFSRC GFLKLKMQ+  GAPVAFVDFQD +CST
Sbjct: 237  ------PCPTLFVANLGPNCMEQELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTSCST 290

Query: 593  AALNSVQDMILYTS-NGEGMRLEY 525
             ALN +Q  ILY+S  G+GMRLEY
Sbjct: 291  GALNHLQGTILYSSPAGDGMRLEY 314