BLASTX nr result

ID: Coptis25_contig00017840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017840
         (986 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26
ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244...   108   2e-21
ref|XP_002327066.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-19
emb|CAN64365.1| hypothetical protein VITISV_031302 [Vitis vinifera]    98   4e-18
ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206...    92   1e-16

>ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|222842947|gb|EEE80494.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  124 bits (310), Expect = 5e-26
 Identities = 108/315 (34%), Positives = 133/315 (42%), Gaps = 39/315 (12%)
 Frame = -2

Query: 853 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 674
           MRC +H  DLSS VGVCA+    +                                   P
Sbjct: 1   MRCKKHPGDLSSGVGVCASYESRK----------------------SDSNSQYLQQPPPP 38

Query: 673 LVFPRSVSPYICRRSDD--SSW--HNQVHDRRF---------YSTPQVGPT---FSKN-- 548
           L+FPRSVSPY+ RR  D  SSW  HN  H+ RF         Y+TP    T   + K   
Sbjct: 39  LIFPRSVSPYVARRKSDDSSSWSNHNHHHNLRFYSTPQLGPAYTTPSSTTTTAAYKKQSQ 98

Query: 547 ----YDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKNSR-----FDQR 395
               + N                                      R+K SR     +   
Sbjct: 99  KFSLFSNLFRSRSDKFKTDSTGRRDSIEPPSSSSPSWFSMVFSGRRRKQSRQLPMEYSGT 158

Query: 394 ANVFPRCRRDRGMSPTN-VEEQRDFETED---------IETESGYSSVATATPARRKGSV 245
            +  PR R DRGMSP    +  +D E  D          E+  G+     A+   R+G  
Sbjct: 159 VSGEPRQRLDRGMSPARGADSDKDCENCDRSPSGSGCSSESSPGWKKTPVASGVMRRGKA 218

Query: 244 LHNRNVSGLAFCMSPLVRAS--PNNHRKDVNLPTSGFSGEISRKNVSGKCHLSTAASLCA 71
            H RNVSGLAFC+SPLVRAS  PN ++K    P  G+SGE+       + HLSTAAS CA
Sbjct: 219 GHPRNVSGLAFCLSPLVRASPKPNWNQKGGLPPELGYSGEV---RAPVRPHLSTAASFCA 275

Query: 70  NRSRKLADFGRYNYN 26
           NRSRKLADFGR N+N
Sbjct: 276 NRSRKLADFGRVNHN 290


>ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244411 [Vitis vinifera]
          Length = 303

 Score =  108 bits (271), Expect = 2e-21
 Identities = 70/143 (48%), Positives = 83/143 (58%), Gaps = 11/143 (7%)
 Frame = -2

Query: 421 KKNSRFDQRANVFPR--CRRDRGMSPTNVEEQRDFETEDIETESGYSSVATA-------- 272
           KK SR     N   R  CR +RGMSP   E++ D + +   + SGYSS + A        
Sbjct: 164 KKQSRLCDETNAGGRRVCRMNRGMSPARREDEED-DYDLSPSASGYSSESQAWRRTPTAT 222

Query: 271 TPARRKGSVLHNRNVSGLAFCMSPLVRASPNNHRKDVNLPTS-GFSGEISRKNVSGKCHL 95
            PA R+      RNVSGLAFCMSPLVRASPN       +P   G  GEI    V  K +L
Sbjct: 223 APATRRARPTLGRNVSGLAFCMSPLVRASPNRQWNQKGMPPEIGLPGEI---RVQTKPNL 279

Query: 94  STAASLCANRSRKLADFGRYNYN 26
           STAA+ CANRSRKLADFGR+N+N
Sbjct: 280 STAAAFCANRSRKLADFGRFNHN 302



 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 57/105 (54%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -2

Query: 853 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 674
           MRC +H +DLSS VGVCA+CLRERLF+LIAAQ                           P
Sbjct: 1   MRCKKHPTDLSSGVGVCASCLRERLFSLIAAQA--EAQARAQAQGRLAEDRRKSDTHPPP 58

Query: 673 LVFPRSVSPYICRR-SDDSSWHNQVHD----RRFYSTPQVGPTFS 554
           LVFPRSVSPY+CRR SDD +  +Q++D    RRFYSTPQVGPT+S
Sbjct: 59  LVFPRSVSPYVCRRKSDDVACGHQLYDTVSQRRFYSTPQVGPTYS 103


>ref|XP_002327066.1| predicted protein [Populus trichocarpa] gi|222835381|gb|EEE73816.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 65/131 (49%), Positives = 76/131 (58%), Gaps = 12/131 (9%)
 Frame = -2

Query: 382 PRCRRDRGMSPTNVE-EQRDFETEDI---------ETESGYSSVATATPARRKGSVLHNR 233
           PR R DRGMSP      + D E  D          E+  G+     +  + R+G   H R
Sbjct: 167 PRQRLDRGMSPARGSVSEEDCENCDRSPSGSGFSPESSPGWKKTPVSQASMRRGKAGHTR 226

Query: 232 NVSGLAFCMSPLVRASPNNH--RKDVNLPTSGFSGEISRKNVSGKCHLSTAASLCANRSR 59
           NVSGL FC+SPLVRASPN +  +K    P  G SGE +R  V  K HLSTAAS CANRSR
Sbjct: 227 NVSGLTFCLSPLVRASPNRNWSQKGGLPPELGLSGE-TRAPV--KPHLSTAASFCANRSR 283

Query: 58  KLADFGRYNYN 26
           KLADFGR N+N
Sbjct: 284 KLADFGRVNHN 294



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
 Frame = -2

Query: 853 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 674
           MRCN+H  DLS SVGVCA+CLRER                                   P
Sbjct: 1   MRCNKHPCDLSCSVGVCASCLRERF--------------RKSDSNSQHHQQQQQQQQPPP 46

Query: 673 LVFPRSVSPYICRRSDD--SSW--HNQVHDRRFYSTPQVGPTFS 554
           L+FP SVSPY+ RR  D  SSW  HNQ H+ RFYSTPQVGPT++
Sbjct: 47  LIFPLSVSPYVSRRKSDDHSSWYAHNQHHNLRFYSTPQVGPTYT 90


>emb|CAN64365.1| hypothetical protein VITISV_031302 [Vitis vinifera]
          Length = 252

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 57/105 (54%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -2

Query: 853 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 674
           MRC +H +DLSS VGVCA+CLRERLF+LIAAQ                           P
Sbjct: 1   MRCKKHPTDLSSGVGVCASCLRERLFSLIAAQA--EAQARAQAQGRLAEDRRKSDTHPPP 58

Query: 673 LVFPRSVSPYICRR-SDDSSWHNQVHD----RRFYSTPQVGPTFS 554
           LVFPRSVSPY+CRR SDD +  +Q++D    RRFYSTPQVGPT+S
Sbjct: 59  LVFPRSVSPYVCRRKSDDVACGHQLYDTVSQRRFYSTPQVGPTYS 103


>ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206256 [Cucumis sativus]
           gi|449499030|ref|XP_004160701.1| PREDICTED:
           uncharacterized protein LOC101229830 [Cucumis sativus]
          Length = 335

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 68/154 (44%), Positives = 83/154 (53%), Gaps = 22/154 (14%)
 Frame = -2

Query: 421 KKNSRF-------DQRANVFPRCRRDRGMSPTNVEEQRDFETEDIE----TESGYSSVAT 275
           KK S+F       DQR    P     RGMSP     + D + +D      + SGYSS ++
Sbjct: 184 KKQSKFCSIEEQMDQRKKPPPSRFFSRGMSPAGGASEADGDCDDRRDGSPSASGYSSESS 243

Query: 274 A---TPARRKGSVLH------NRNVSGLAFCMSPLVRASPNN-HRKDVNLPTSG-FSGEI 128
               +PA   GS         +RNVS LAFC+SPLVRASPN+ H     LP    +SG++
Sbjct: 244 KWKPSPAASHGSTARRGRQGLSRNVSSLAFCLSPLVRASPNHRHWNQKGLPPEFVYSGDV 303

Query: 127 SRKNVSGKCHLSTAASLCANRSRKLADFGRYNYN 26
               V  K H+S AAS CANRSRKLADFGR N N
Sbjct: 304 ---RVPNKPHISEAASFCANRSRKLADFGRVNAN 334



 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 53/115 (46%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
 Frame = -2

Query: 853 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQV------XXXXXXXXXXXXXXXGXXXXX 692
           MRC +H+SD++S+VGVCATCLRERL +L+AAQ                            
Sbjct: 1   MRCKKHLSDVTSAVGVCATCLRERLLSLMAAQARAEAHQLQLSRLRSSTAAAEDLPRKSD 60

Query: 691 XXXXXPLVFPRSVSPYICRRS-DDSSW---------HNQVHDRRFYSTPQVGPTF 557
                PLVFPRSVSPY+ RR  +DSSW         H + H  RFYSTPQVGPT+
Sbjct: 61  PLPPPPLVFPRSVSPYVSRRKVEDSSWSFQSPLDDRHRRFH-HRFYSTPQVGPTY 114


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