BLASTX nr result

ID: Coptis25_contig00017834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017834
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258...   340   6e-91
emb|CBI26931.3| unnamed protein product [Vitis vinifera]              321   4e-85
ref|XP_002305850.1| predicted protein [Populus trichocarpa] gi|2...   318   3e-84
ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|2...   316   1e-83
ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259...   313   1e-82

>ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258737 [Vitis vinifera]
            gi|296087202|emb|CBI33576.3| unnamed protein product
            [Vitis vinifera]
          Length = 262

 Score =  340 bits (872), Expect = 6e-91
 Identities = 169/267 (63%), Positives = 196/267 (73%), Gaps = 2/267 (0%)
 Frame = -3

Query: 1243 MGDHFVLLVDRLLTESTLEATIE-RSRSQHVTPSAVEADKTQFFSHKMDFGDGSPVK-MV 1070
            MGDHFVLLVDRLLTESTLEA IE +++ QH TP   E   T F +H+MD   G   + +V
Sbjct: 1    MGDHFVLLVDRLLTESTLEAAIESKNQWQHTTPCGSEDMMTNFSAHRMDVDIGPSQRILV 60

Query: 1069 ECRICQDEDEDFKMETPCSCCGSLKYAHRRCVQKWCNEKGDTICEICHQQFKPGYTAPPK 890
            +CRIC DEDED  ME PCSC GSLKYAHR CVQ+WCNEKG+T CEICHQQF+P YTAPP 
Sbjct: 61   QCRICHDEDEDSNMEVPCSCAGSLKYAHRGCVQRWCNEKGNTTCEICHQQFRPNYTAPPP 120

Query: 889  LFHYGGVPMNFRGNWEISRRDLHNPRFIAMVSTDRNFLDPDYDEYSMHTTRSLLCCRTVA 710
            LFHYGG+PMNFRGNWE+SRRD ++PRFIAMV++DRNFLD D DEY    +RS++CCR VA
Sbjct: 121  LFHYGGIPMNFRGNWEVSRRDANHPRFIAMVASDRNFLDTDIDEYPAPNSRSVICCRIVA 180

Query: 709  IIFMVLLILRHTLPIIISGPEEYSXXXXXXXXLRTAGILLPVYIMVRAVTAIQHRRSQQX 530
            IIFM+LL+LRHTLPIIISG  EYS        LR  GILLPVYIMV+A TA Q RR QQ 
Sbjct: 181  IIFMILLVLRHTLPIIISGAGEYSFTLFTLLMLRAIGILLPVYIMVKACTAFQRRRHQQ- 239

Query: 529  XXXXXXXXXXXXXXXXXLQPQPHVIRV 449
                             +QPQP +I++
Sbjct: 240  -----DARNLPSDEENEMQPQPRIIQI 261


>emb|CBI26931.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  321 bits (822), Expect = 4e-85
 Identities = 160/248 (64%), Positives = 188/248 (75%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1186 ATIE-RSRSQHVTPSAVEADKTQFFSHKMDFGDGS-PVKMVECRICQDEDEDFKMETPCS 1013
            A IE R+R    + SA+   K    SHKMDF  GS P K+VECRICQDEDED  METPCS
Sbjct: 30   AAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLVECRICQDEDEDSNMETPCS 89

Query: 1012 CCGSLKYAHRRCVQKWCNEKGDTICEICHQQFKPGYTAPPKLFHYGGVPMNFRGNWEISR 833
            CCGSLKYAHR CVQ+WCNEKG+T+CEIC QQFKPGYTAPP LF + G+P+N RGNWEISR
Sbjct: 90   CCGSLKYAHRSCVQRWCNEKGNTMCEICQQQFKPGYTAPPPLFQFRGIPINLRGNWEISR 149

Query: 832  RDLHNPRFIAMVSTDRNFLDPDYDEYSMHTTRSLLCCRTVAIIFMVLLILRHTLPIIISG 653
             +L+NPRFIAMVSTDRNFLDPDY+E++  T+RS++CCR+VAIIFMVLLILRHTLP++I+G
Sbjct: 150  GELNNPRFIAMVSTDRNFLDPDYNEFTTSTSRSMMCCRSVAIIFMVLLILRHTLPVMING 209

Query: 652  PEEYSXXXXXXXXLRTAGILLPVYIMVRAVTAIQHRRSQQXXXXXXXXXXXXXXXXXXLQ 473
             EEY+        LRTAGI+LP+YIM+RAVTAIQ RR +Q                  LQ
Sbjct: 210  AEEYTFPLFMLVLLRTAGIILPIYIMLRAVTAIQ-RRPRQQDPPTPYASTDEETEQPALQ 268

Query: 472  PQPHVIRV 449
            PQ H+I V
Sbjct: 269  PQTHIIHV 276


>ref|XP_002305850.1| predicted protein [Populus trichocarpa] gi|222848814|gb|EEE86361.1|
            predicted protein [Populus trichocarpa]
          Length = 237

 Score =  318 bits (815), Expect = 3e-84
 Identities = 157/235 (66%), Positives = 181/235 (77%), Gaps = 2/235 (0%)
 Frame = -3

Query: 1243 MGDHFVLLVDRLLTESTLEATIE-RSRSQHVTPSAVEADKTQFFSHKMDFGDGSPV-KMV 1070
            MGDHFV LVDRLLTESTLEA IE ++R +    SA + +  +F  H MD    S   K V
Sbjct: 1    MGDHFVFLVDRLLTESTLEAAIESQNRLRQTMASASKENTKEFSPHWMDLELTSLAGKSV 60

Query: 1069 ECRICQDEDEDFKMETPCSCCGSLKYAHRRCVQKWCNEKGDTICEICHQQFKPGYTAPPK 890
            ECRIC +E++D  ME PCSC GSLKYAHR+CVQ+WCNEKG+TICEICHQQF+PGYTAPP 
Sbjct: 61   ECRICHEEEDDMNMEMPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQQFEPGYTAPPP 120

Query: 889  LFHYGGVPMNFRGNWEISRRDLHNPRFIAMVSTDRNFLDPDYDEYSMHTTRSLLCCRTVA 710
            LF YG +PMNFRGNWEI RRDLHNP  IAMV+TD  FLD D+DEYS  + RS++CCR +A
Sbjct: 121  LFCYGAIPMNFRGNWEIPRRDLHNPPSIAMVTTDHEFLDSDFDEYSAPSPRSVMCCRIIA 180

Query: 709  IIFMVLLILRHTLPIIISGPEEYSXXXXXXXXLRTAGILLPVYIMVRAVTAIQHR 545
            IIFMVLL+LRHTL I+ISG  +YS        LRT GILLPVY+MVRA TAIQHR
Sbjct: 181  IIFMVLLVLRHTLAILISGAGDYSMTLFMLLILRTVGILLPVYVMVRAFTAIQHR 235


>ref|XP_002312427.1| predicted protein [Populus trichocarpa] gi|222852247|gb|EEE89794.1|
            predicted protein [Populus trichocarpa]
          Length = 233

 Score =  316 bits (810), Expect = 1e-83
 Identities = 153/233 (65%), Positives = 184/233 (78%), Gaps = 2/233 (0%)
 Frame = -3

Query: 1243 MGDHFVLLVDRLLTESTLEATIE-RSRSQHVTPSAVEADKTQFFSHKMDFGD-GSPVKMV 1070
            MGDHFVLLV+RLLTESTLEA IE R+ S   T S V+  K      KMDFGD  +P K+V
Sbjct: 1    MGDHFVLLVNRLLTESTLEAAIESRNLSMQATASTVDDTKIDKSFQKMDFGDISTPRKLV 60

Query: 1069 ECRICQDEDEDFKMETPCSCCGSLKYAHRRCVQKWCNEKGDTICEICHQQFKPGYTAPPK 890
            ECRICQDED+D  METPCSCCGSLKY HRRCVQ+WCNEKG+TICEICHQ+FKPGYTAPP 
Sbjct: 61   ECRICQDEDDDSNMETPCSCCGSLKYVHRRCVQRWCNEKGNTICEICHQEFKPGYTAPPP 120

Query: 889  LFHYGGVPMNFRGNWEISRRDLHNPRFIAMVSTDRNFLDPDYDEYSMHTTRSLLCCRTVA 710
            LF   G P+NFRGNWE SRR+L+ P FIA+VST+RNFL+ DYDEY+  TTR+ + CR +A
Sbjct: 121  LFQI-GFPVNFRGNWETSRRELNGPHFIAVVSTERNFLNNDYDEYAASTTRNAIYCRLIA 179

Query: 709  IIFMVLLILRHTLPIIISGPEEYSXXXXXXXXLRTAGILLPVYIMVRAVTAIQ 551
            ++FMVLLILRH+LP++++G    S        LRTAGI+L +Y+M++AVTAIQ
Sbjct: 180  VVFMVLLILRHSLPLVLNGTNNISFPVFMSLFLRTAGIILSIYVMLKAVTAIQ 232


>ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera]
          Length = 240

 Score =  313 bits (801), Expect = 1e-82
 Identities = 162/267 (60%), Positives = 188/267 (70%), Gaps = 2/267 (0%)
 Frame = -3

Query: 1243 MGDHFVLLVDRLLTESTLEATIE-RSRSQHVTPSAVEADKTQFFSHKMDFGDGS-PVKMV 1070
            MGDHFVLLVDRLLTESTLEA IE R+R    + SA+   K    SHKMDF  GS P K+V
Sbjct: 1    MGDHFVLLVDRLLTESTLEAAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLV 60

Query: 1069 ECRICQDEDEDFKMETPCSCCGSLKYAHRRCVQKWCNEKGDTICEICHQQFKPGYTAPPK 890
            ECRICQDEDED  METPCSCCGSLKYAHR CVQ+WCNEKG+T+CEIC QQFKPGYTAPP 
Sbjct: 61   ECRICQDEDEDSNMETPCSCCGSLKYAHRSCVQRWCNEKGNTMCEICQQQFKPGYTAPPP 120

Query: 889  LFHYGGVPMNFRGNWEISRRDLHNPRFIAMVSTDRNFLDPDYDEYSMHTTRSLLCCRTVA 710
            LF + G+P+N RGNWEISR +L+NPRFIAMVSTDRNFLDPDY+E++  T+RS++CCR+VA
Sbjct: 121  LFQFRGIPINLRGNWEISRGELNNPRFIAMVSTDRNFLDPDYNEFTTSTSRSMMCCRSVA 180

Query: 709  IIFMVLLILRHTLPIIISGPEEYSXXXXXXXXLRTAGILLPVYIMVRAVTAIQHRRSQQX 530
            II ++L                           RTAGI+LP+YIM+RAVTAIQ RR +Q 
Sbjct: 181  IILVLL---------------------------RTAGIILPIYIMLRAVTAIQ-RRPRQQ 212

Query: 529  XXXXXXXXXXXXXXXXXLQPQPHVIRV 449
                             LQPQ H+I V
Sbjct: 213  DPPTPYASTDEETEQPALQPQTHIIHV 239


Top