BLASTX nr result

ID: Coptis25_contig00017833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017833
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631949.1| PREDICTED: uncharacterized protein LOC100251...    96   3e-18
emb|CBI22888.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_003528621.1| PREDICTED: uncharacterized protein LOC100793...    91   8e-17
ref|XP_002523650.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002885184.1| hypothetical protein ARALYDRAFT_479171 [Arab...    90   2e-16

>ref|XP_003631949.1| PREDICTED: uncharacterized protein LOC100251734 [Vitis vinifera]
          Length = 653

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 10/84 (11%)
 Frame = -1

Query: 222 ENDAFLKFVAYAHSILSPEEP----------ETGPSWNWILTKILKTCSAYSSGVTAAIL 73
           E D FL F+ YA S+L PEE            TGP W+WI  +ILKTC AYSSGVT+AIL
Sbjct: 8   EEDPFLGFIDYARSVLLPEEEGCDSSGNKEETTGPGWSWIACRILKTCIAYSSGVTSAIL 67

Query: 72  LSDLAQAWSEQYKVGAPKRRNDCI 1
           LS+L+QAW+EQ++  AP++R +CI
Sbjct: 68  LSELSQAWNEQHRARAPRKRPECI 91


>emb|CBI22888.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 10/84 (11%)
 Frame = -1

Query: 222 ENDAFLKFVAYAHSILSPEEP----------ETGPSWNWILTKILKTCSAYSSGVTAAIL 73
           E D FL F+ YA S+L PEE            TGP W+WI  +ILKTC AYSSGVT+AIL
Sbjct: 27  EEDPFLGFIDYARSVLLPEEEGCDSSGNKEETTGPGWSWIACRILKTCIAYSSGVTSAIL 86

Query: 72  LSDLAQAWSEQYKVGAPKRRNDCI 1
           LS+L+QAW+EQ++  AP++R +CI
Sbjct: 87  LSELSQAWNEQHRARAPRKRPECI 110


>ref|XP_003528621.1| PREDICTED: uncharacterized protein LOC100793443 [Glycine max]
          Length = 677

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 8/84 (9%)
 Frame = -1

Query: 228 QSENDAFLKFVAYAHS-ILSPEEPETGPS-------WNWILTKILKTCSAYSSGVTAAIL 73
           + E D FLKFV YA S +LS E+ + G         W+WI+++ILKTC AYSSGVT AIL
Sbjct: 33  EQEEDPFLKFVDYARSELLSLEDDQNGDGEGSDGLGWSWIVSRILKTCVAYSSGVTPAIL 92

Query: 72  LSDLAQAWSEQYKVGAPKRRNDCI 1
           LS+L+QAWSEQ +VGAPK+R + I
Sbjct: 93  LSELSQAWSEQRRVGAPKKRLELI 116


>ref|XP_002523650.1| conserved hypothetical protein [Ricinus communis]
           gi|223537102|gb|EEF38736.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 9/81 (11%)
 Frame = -1

Query: 228 QSENDAFLKFVAYAHSILSPEEPET---------GPSWNWILTKILKTCSAYSSGVTAAI 76
           Q + D F+ FV YA S+LSP E E          GP W+WI ++ILKTC AYSSGVT AI
Sbjct: 27  QEQEDPFIAFVDYARSVLSPVEEEEEGEENIGNGGPGWSWIASRILKTCIAYSSGVTPAI 86

Query: 75  LLSDLAQAWSEQYKVGAPKRR 13
           LLSDL+QAW+E  + GA K+R
Sbjct: 87  LLSDLSQAWNEHNRTGAAKKR 107


>ref|XP_002885184.1| hypothetical protein ARALYDRAFT_479171 [Arabidopsis lyrata subsp.
           lyrata] gi|297331024|gb|EFH61443.1| hypothetical protein
           ARALYDRAFT_479171 [Arabidopsis lyrata subsp. lyrata]
          Length = 642

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 17/98 (17%)
 Frame = -1

Query: 243 DITTTQSENDAFLKFVAYAHSILSPEEPET-----------------GPSWNWILTKILK 115
           +I   +   D FL F+ YA +I+SPEE E                  GP W W+ ++ILK
Sbjct: 11  EIDDQEEVEDPFLAFIDYARTIISPEEDEDEKDESKRDPSEAMTEAGGPGWGWVASRILK 70

Query: 114 TCSAYSSGVTAAILLSDLAQAWSEQYKVGAPKRRNDCI 1
           TC+AYSSGVTAAILLSDL+QAW EQ K G  K++ + I
Sbjct: 71  TCTAYSSGVTAAILLSDLSQAWHEQNKPGMSKKKPELI 108


Top