BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017831
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   121   7e-26
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   115   5e-24
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22

>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/84 (66%), Positives = 69/84 (82%)
 Frame = -2

Query: 305 ISMDWNTYATIAHIYMKVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVT 126
           I MDWNTYA  A+ Y+K GL DKA+  LKKSE+RL K+DG+GYN+LISL+AS+GNK EV 
Sbjct: 242 IVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVL 301

Query: 125 RLWELKKTACKKIINMDYMTMLGS 54
           RLW L+K+ACK+ IN DY+TML S
Sbjct: 302 RLWSLEKSACKRNINRDYITMLES 325


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/84 (66%), Positives = 69/84 (82%)
 Frame = -2

Query: 305 ISMDWNTYATIAHIYMKVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVT 126
           I MDWNTYA  A+ Y+K GL DKA+  LKKSE+RL K+DG+GYN+LISL+AS+GNK EV 
Sbjct: 242 IVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVL 301

Query: 125 RLWELKKTACKKIINMDYMTMLGS 54
           RLW L+K+ACK+ IN DY+TML S
Sbjct: 302 RLWSLEKSACKRNINRDYITMLES 325


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  115 bits (287), Expect = 5e-24
 Identities = 50/83 (60%), Positives = 70/83 (84%)
 Frame = -2

Query: 302 SMDWNTYATIAHIYMKVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVTR 123
           +MDWNTYA +A+ Y+K GL DKAV  L+KSE++L KKDG+GYN+LISL+A++G K+EV R
Sbjct: 218 AMDWNTYAVVANFYIKAGLADKAVDALRKSEEKLDKKDGIGYNHLISLYATLGIKSEVLR 277

Query: 122 LWELKKTACKKIINMDYMTMLGS 54
           +W+L+K+ CK+ IN D++TML S
Sbjct: 278 IWDLQKSVCKRRINRDFVTMLES 300


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/84 (64%), Positives = 67/84 (79%)
 Frame = -2

Query: 305 ISMDWNTYATIAHIYMKVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVT 126
           I MDWNTYA  A+ Y+   LTDKA+ TLKKSE RL KKDG GYN+LISL+A +GNKTEV 
Sbjct: 232 IVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVL 291

Query: 125 RLWELKKTACKKIINMDYMTMLGS 54
           RLW+L+K+AC++ IN DY+ M+ S
Sbjct: 292 RLWDLEKSACERHINKDYIIMMES 315


>ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|222870880|gb|EEF08011.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/84 (59%), Positives = 67/84 (79%)
 Frame = -2

Query: 305 ISMDWNTYATIAHIYMKVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVT 126
           I +DWN+YA  A  Y+K GLTDKA+ +LKKSE RL KKDG GYN+LISL+A++G KTEV 
Sbjct: 232 IVVDWNSYAVAASSYIKGGLTDKAIDSLKKSETRLDKKDGTGYNHLISLYATLGEKTEVL 291

Query: 125 RLWELKKTACKKIINMDYMTMLGS 54
           RLW+L+K+ C++ IN DY+ ++ S
Sbjct: 292 RLWDLEKSTCERPINKDYINIMAS 315