BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017829
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]                          120   4e-36
gb|ACF81664.1| unknown [Zea mays] gi|414886465|tpg|DAA62479.1| T...   123   4e-26
gb|ABR16853.1| unknown [Picea sitchensis]                             122   7e-26
ref|XP_002534470.1| transcription initiation factor iib, putativ...   122   1e-25
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   121   2e-25

>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
          Length = 312

 Score =  120 bits (302), Expect(2) = 4e-36
 Identities = 61/89 (68%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
 Frame = -1

Query: 810 NEIYKKVVDHKSMRGRNLDAFLVACLFVVCHQEHKPRTVKEIHSIANGATKKEIGMNKFF 631
           NEIYKKV D KS RGRN DA L ACL++ C QE KPRTVKEI S+ANGATKKEIG  K +
Sbjct: 130 NEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEY 189

Query: 630 MEKQL-KEIGESMETGATYAGDFMRRFCS 547
           + KQL  E G+S+E G  +AGDFMRRFCS
Sbjct: 190 IVKQLGLETGQSVEMGTIHAGDFMRRFCS 218



 Score = 57.4 bits (137), Expect(2) = 4e-36
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -3

Query: 568 FYEALLFRLGMNHQAIKAAQEAVQNSKELDIRRNPTSVAVAVIYM 434
           F       LGMN+QA+KAAQEAVQ S+E DIRR+P S+A AVIY+
Sbjct: 212 FMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYI 256


>gb|ACF81664.1| unknown [Zea mays] gi|414886465|tpg|DAA62479.1| TPA: hypothetical
           protein ZEAMMB73_928076 [Zea mays]
           gi|414886466|tpg|DAA62480.1| TPA: hypothetical protein
           ZEAMMB73_928076 [Zea mays]
          Length = 312

 Score =  123 bits (309), Expect = 4e-26
 Identities = 72/140 (51%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
 Frame = -1

Query: 810 NEIYKKVVDHKSMRGRNLDAFLVACLFVVCHQEHKPRTVKEIHSIANGATKKEIGMNKFF 631
           NEIYKKV D KS+RGRN DA L ACL++ C QE +PRTVKEI S+ANGATKKEIG  K F
Sbjct: 130 NEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATKKEIGRAKEF 189

Query: 630 MEKQLK-EIGESMETGATYAGDFMRRFCSV*A*ITKLLKLHKKQSRTLKSLI*GGTPPQW 454
           + KQL+ E+G+SME G  +AG+F+RRFCS      + ++  +   +  + L    +P   
Sbjct: 190 IVKQLEVEMGQSMEMGTIHAGNFLRRFCSTLGMNNQAVRAAQDAVKHSEELDIRRSPISI 249

Query: 453 Q*LLSTCMITQLSDDRKFLK 394
                  MITQLS+D+K LK
Sbjct: 250 A-AAVIYMITQLSEDKKPLK 268


>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score =  122 bits (307), Expect = 7e-26
 Identities = 70/140 (50%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
 Frame = -1

Query: 810 NEIYKKVVDHKSMRGRNLDAFLVACLFVVCHQEHKPRTVKEIHSIANGATKKEIGMNKFF 631
           NEIYKKV D KS+RGRN DA L ACL++ C QE KPRTVKEI S+ANGA+KKE+G  K F
Sbjct: 131 NEIYKKVEDSKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASKKEVGRAKEF 190

Query: 630 MEKQL-KEIGESMETGATYAGDFMRRFCSV*A*ITKLLKLHKKQSRTLKSLI*GGTPPQW 454
           + KQL +E+G+SME G  +AGDF+RRFCS      + +K   +  +  + L    +P   
Sbjct: 191 IVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGHQAVKAATEAVKKSEELDIRRSPISI 250

Query: 453 Q*LLSTCMITQLSDDRKFLK 394
               +  MI+QLS+++K L+
Sbjct: 251 A-AAAIYMISQLSEEKKLLR 269


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223525233|gb|EEF27913.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  122 bits (305), Expect = 1e-25
 Identities = 71/140 (50%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = -1

Query: 810 NEIYKKVVDHKSMRGRNLDAFLVACLFVVCHQEHKPRTVKEIHSIANGATKKEIGMNKFF 631
           NEIYKKV D KS RGRN DA L ACL++ C QE KPRTVKEI S+ANGATKKEIG  K +
Sbjct: 130 NEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEY 189

Query: 630 MEKQL-KEIGESMETGATYAGDFMRRFCSV*A*ITKLLKLHKKQSRTLKSLI*GGTPPQW 454
           + KQL  E G+S+E G  +AGDFMRRFCS      + +K  ++  +  +      +P   
Sbjct: 190 IVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEFDIRRSPISI 249

Query: 453 Q*LLSTCMITQLSDDRKFLK 394
                  +I+QLSDD+K L+
Sbjct: 250 A-AAVIYIISQLSDDKKLLR 268


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  121 bits (304), Expect = 2e-25
 Identities = 72/140 (51%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = -1

Query: 810 NEIYKKVVDHKSMRGRNLDAFLVACLFVVCHQEHKPRTVKEIHSIANGATKKEIGMNKFF 631
           NEIYK+V D KS RGRN DA L ACL++ C QE KPRTVKEI S+ANGATKKEIG  K +
Sbjct: 130 NEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEY 189

Query: 630 MEKQL-KEIGESMETGATYAGDFMRRFCSV*A*ITKLLKLHKKQSRTLKSLI*GGTPPQW 454
           + KQL  E G+S+E G  +AGDFMRRFCS      + +K  ++  +  +      +P   
Sbjct: 190 IVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRSPISI 249

Query: 453 Q*LLSTCMITQLSDDRKFLK 394
                  +ITQLSDD+K LK
Sbjct: 250 A-AAVIYIITQLSDDKKPLK 268