BLASTX nr result

ID: Coptis25_contig00017819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017819
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48881.1| unknown [Medicago truncatula]                           63   3e-08
ref|NP_174536.1| putative plastid developmental protein DAG [Ara...    62   4e-08
ref|NP_001056622.1| Os06g0116600 [Oryza sativa Japonica Group] g...    62   4e-08
dbj|BAC22214.1| putative plastid protein [Oryza sativa Japonica ...    62   4e-08
gb|AFW75308.1| hypothetical protein ZEAMMB73_861231 [Zea mays]         62   4e-08

>gb|AFK48881.1| unknown [Medicago truncatula]
          Length = 217

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -2

Query: 152 ILNIFFSREEAKKKIYRIVCENHFVGFGAEIEAEISNKLKGMPGVLAVLP 3
           +  +  S EEAKKKIY + CE +F GFG EI+ E SNKL+G+PGVL VLP
Sbjct: 110 LAKVLGSEEEAKKKIYNVSCERYF-GFGCEIDGETSNKLEGLPGVLFVLP 158


>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -2

Query: 152 ILNIFFSREEAKKKIYRIVCENHFVGFGAEIEAEISNKLKGMPGVLAVLP 3
           +  I  S EEAKKKIY + CE +F GFG EI+ E SNKL+G+PGVL +LP
Sbjct: 121 LAKIIGSEEEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFILP 169


>ref|NP_001056622.1| Os06g0116600 [Oryza sativa Japonica Group]
           gi|55296199|dbj|BAD67917.1| putative DAL1 protein [Oryza
           sativa Japonica Group] gi|113594662|dbj|BAF18536.1|
           Os06g0116600 [Oryza sativa Japonica Group]
           gi|218197457|gb|EEC79884.1| hypothetical protein
           OsI_21391 [Oryza sativa Indica Group]
           gi|222634859|gb|EEE64991.1| hypothetical protein
           OsJ_19911 [Oryza sativa Japonica Group]
          Length = 165

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -2

Query: 152 ILNIFFSREEAKKKIYRIVCENHFVGFGAEIEAEISNKLKGMPGVLAVLP 3
           +  +  S EEAKKKIY + CE +F GFG EI+ E SNKL+G+PGVL VLP
Sbjct: 58  LAKVLGSEEEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFVLP 106


>dbj|BAC22214.1| putative plastid protein [Oryza sativa Japonica Group]
          Length = 227

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -2

Query: 152 ILNIFFSREEAKKKIYRIVCENHFVGFGAEIEAEISNKLKGMPGVLAVLP 3
           +  +  S EEAKKKIY + CE +F GFG EI+ E SNKL+G+PGVL VLP
Sbjct: 120 LAKVLGSEEEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFVLP 168


>gb|AFW75308.1| hypothetical protein ZEAMMB73_861231 [Zea mays]
          Length = 217

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -2

Query: 152 ILNIFFSREEAKKKIYRIVCENHFVGFGAEIEAEISNKLKGMPGVLAVLP 3
           +  +  S EEAKKKIY + CE +F GFG EI+ E SNKL+G+PGVL VLP
Sbjct: 110 LAKVLGSEEEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFVLP 158


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