BLASTX nr result

ID: Coptis25_contig00017801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017801
         (1455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301149.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002320031.1| f-box family protein [Populus trichocarpa] g...   375   e-101
ref|XP_002285319.1| PREDICTED: F-box/kelch-repeat protein At5g43...   370   e-100
emb|CBI19402.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_003557010.1| PREDICTED: F-box/kelch-repeat protein At5g43...   358   1e-96

>ref|XP_002301149.1| predicted protein [Populus trichocarpa] gi|222842875|gb|EEE80422.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  376 bits (965), Expect = e-102
 Identities = 195/387 (50%), Positives = 233/387 (60%), Gaps = 5/387 (1%)
 Frame = +1

Query: 130  SSSPLMDSQIWRQLPQELIEHILVFLPLKTFFNLRSTCKRFYSLLFSPSFISKHSSLYSL 309
            S  P MD  IW +LP+EL+EH+L  LPLKT  NLRSTCKRF SL+FSPSF+SKH++  + 
Sbjct: 10   SRLPEMDPAIWSRLPEELLEHVLSCLPLKTLLNLRSTCKRFKSLMFSPSFMSKHTTRGTA 69

Query: 310  TNNTENTXXXXXXXXXXXXXXXXXXXXXXXHFPLYDSIHNHWR-----MXXXXXXXXXXX 474
             ++                            FPLYDSI   WR     +           
Sbjct: 70   FSS----------------FLLLSHPQFYQQFPLYDSIIGSWRHLALSLSFLLPVTGSNG 113

Query: 475  XXXXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSRIISYPILPFAFESVTLIPTSNGYKI 654
                      NG             VCN LA+SSRI+ +P  PFAFES+  +    GYKI
Sbjct: 114  SPSCSLLSSSNGLFCFSLPSSNSFLVCNFLAKSSRIVEFPSYPFAFESLAFVSMPFGYKI 173

Query: 655  FVLSSGSSLNSAYVYDSRGTSWARFPGFNPILRLNLNQEGVLCNGHLFFSTPEAFSIVGF 834
            FVL S  S NS +VYDS+  SW +F  F PIL  N  QEGV  NG L+F+T E FSIV F
Sbjct: 174  FVLCSKFSSNSVFVYDSKVHSWQKFDRFEPILGDNYRQEGVFFNGSLYFTTSEPFSIVCF 233

Query: 835  DLESGNWRDSTEELPGNGELTFARLVSNACEGKLYMXXXXXXXXXXXXMKLWGLRGGETG 1014
            DLESG W     ELPG  +LTF RLVS+  E KLY+            MKLW L  G   
Sbjct: 234  DLESGRWERLDNELPG--DLTFVRLVSDG-ENKLYLIGGVGRNGISRSMKLWELGDG--- 287

Query: 1015 REWMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEGAICVCCYTWPEVLCYKISRQTWHWL 1194
            R W+E+ SLPEMMCKKF+S+CYHNY+ VYCF+H+G IC+CCYTWPE+L  K+SR+TWHWL
Sbjct: 288  RNWIEVESLPEMMCKKFVSVCYHNYERVYCFWHQGMICICCYTWPEILYCKVSRRTWHWL 347

Query: 1195 PKCPSLPDKWSCGFKWFSFVPNLYALV 1275
            PKCPSLP+KWSCGF+WFSFVP LYA V
Sbjct: 348  PKCPSLPEKWSCGFRWFSFVPELYATV 374


>ref|XP_002320031.1| f-box family protein [Populus trichocarpa]
            gi|222860804|gb|EEE98346.1| f-box family protein [Populus
            trichocarpa]
          Length = 373

 Score =  375 bits (963), Expect = e-101
 Identities = 197/387 (50%), Positives = 232/387 (59%), Gaps = 5/387 (1%)
 Frame = +1

Query: 130  SSSPLMDSQIWRQLPQELIEHILVFLPLKTFFNLRSTCKRFYSLLFSPSFISKHSSLYSL 309
            S  P MD  IW +LP+EL+EH+L FLPLK F NLRST K F SLLFSPSF+SKH++  S 
Sbjct: 9    SRLPEMDPAIWSRLPEELLEHVLSFLPLKMFLNLRSTSKHFKSLLFSPSFMSKHTASGSP 68

Query: 310  TNNTENTXXXXXXXXXXXXXXXXXXXXXXXHFPLYDSIHNHWR-----MXXXXXXXXXXX 474
             ++                            FPLYDSI   WR     +           
Sbjct: 69   FSS----------------FLLLSHPQFFQQFPLYDSIVGSWRNLALSLSLLLPGTGSNA 112

Query: 475  XXXXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSRIISYPILPFAFESVTLIPTSNGYKI 654
                      NG             VCN +A+SSRI+ +P  PF FES   +  S GYKI
Sbjct: 113  SPSCTLLSSSNGLICFSLPSSCSLLVCNFMAKSSRIVEFPSHPFTFESFVFVSMSFGYKI 172

Query: 655  FVLSSGSSLNSAYVYDSRGTSWARFPGFNPILRLNLNQEGVLCNGHLFFSTPEAFSIVGF 834
            FVL S  S NS +VYDS+  SW +F  F PIL  N  QEGV  NG L+F+T E FSIV F
Sbjct: 173  FVLCSKFSSNSVFVYDSKVHSWQKFDRFEPILGDNYRQEGVFFNGSLYFTTSEPFSIVCF 232

Query: 835  DLESGNWRDSTEELPGNGELTFARLVSNACEGKLYMXXXXXXXXXXXXMKLWGLRGGETG 1014
            DLESG W     ELPG  ++TF RLVS+  E KLY+            MKLW L G    
Sbjct: 233  DLESGRWGRLDNELPG--DVTFVRLVSDG-EKKLYLIGGVGRNGISRSMKLWELDGE--- 286

Query: 1015 REWMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEGAICVCCYTWPEVLCYKISRQTWHWL 1194
            R W+E+ SLPEMMCKKF+S+CYHNY+ VYCF HEG IC+CCYTWPE+L YK+SR+TWHWL
Sbjct: 287  RNWIEVESLPEMMCKKFLSVCYHNYERVYCFLHEGMICICCYTWPEILYYKVSRRTWHWL 346

Query: 1195 PKCPSLPDKWSCGFKWFSFVPNLYALV 1275
            PKCPSLP+KWSCGF+WFSFVP LYALV
Sbjct: 347  PKCPSLPEKWSCGFRWFSFVPELYALV 373


>ref|XP_002285319.1| PREDICTED: F-box/kelch-repeat protein At5g43190-like [Vitis vinifera]
          Length = 372

 Score =  370 bits (950), Expect = e-100
 Identities = 192/385 (49%), Positives = 235/385 (61%), Gaps = 2/385 (0%)
 Frame = +1

Query: 127  ASSSPLMDSQIWRQLPQELIEHILVFLPLKTFFNLRSTCKRFYSLLFSPSFISKHSSLYS 306
            A  S  MD  IW  LP EL+EH+L FLPLK+FFNL  TCKRF SL++SPSF++K+S   S
Sbjct: 5    AGKSQEMDPGIWGHLPVELLEHVLSFLPLKSFFNLLCTCKRFKSLIYSPSFLAKYSPSSS 64

Query: 307  LTNNTENTXXXXXXXXXXXXXXXXXXXXXXXHFPLYDSIHNHWR--MXXXXXXXXXXXXX 480
             ++++                            PLYDS   +WR                
Sbjct: 65   SSSSSP---------ALSSFLLLSHPQFYRHRLPLYDSAIGNWRNLSLTCSILLPYAATT 115

Query: 481  XXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSRIISYPILPFAFESVTLIPTSNGYKIFV 660
                    NG             VCNLL  SSR++ +P  PFAFE +TL+P  +GYKIF+
Sbjct: 116  AITLLSAANGLLCFSLPNSSSFLVCNLLVGSSRVLQFPGYPFAFEMLTLVPAPDGYKIFM 175

Query: 661  LSSGSSLNSAYVYDSRGTSWARFPGFNPILRLNLNQEGVLCNGHLFFSTPEAFSIVGFDL 840
            ++SGSS N+A+VYDS   SW  F GF+P L  N +Q GV CNG L+F T E FSIV FDL
Sbjct: 176  IASGSSSNNAWVYDSGVHSWREFQGFDPTLSDNCHQ-GVYCNGVLYFCTSEPFSIVCFDL 234

Query: 841  ESGNWRDSTEELPGNGELTFARLVSNACEGKLYMXXXXXXXXXXXXMKLWGLRGGETGRE 1020
            ESG W  S  ELPG  ELTF +LVS+  EGKLY+            MKLW L G      
Sbjct: 235  ESGVWDRSVVELPG--ELTFVKLVSDG-EGKLYLVGGIGRNGISKSMKLWELEG----EN 287

Query: 1021 WMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEGAICVCCYTWPEVLCYKISRQTWHWLPK 1200
            W+ + SLPE MC+K +S+CYHNY+HVYCF+H+  ICVCCYTWPE+L YK++R+TWHWLPK
Sbjct: 288  WVLVESLPEFMCQKLVSVCYHNYEHVYCFWHQETICVCCYTWPEILYYKVARRTWHWLPK 347

Query: 1201 CPSLPDKWSCGFKWFSFVPNLYALV 1275
            CPSLPDKWSCGF+WFSFVP LYA V
Sbjct: 348  CPSLPDKWSCGFRWFSFVPELYAQV 372


>emb|CBI19402.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  370 bits (949), Expect = e-100
 Identities = 195/400 (48%), Positives = 240/400 (60%), Gaps = 6/400 (1%)
 Frame = +1

Query: 88   FSACSMVR----PLRTCASSSPLMDSQIWRQLPQELIEHILVFLPLKTFFNLRSTCKRFY 255
            FS C+ V      +   A  S  MD  IW  LP EL+EH+L FLPLK+FFNL  TCKRF 
Sbjct: 124  FSWCNRVSIYLTDMAARAGKSQEMDPGIWGHLPVELLEHVLSFLPLKSFFNLLCTCKRFK 183

Query: 256  SLLFSPSFISKHSSLYSLTNNTENTXXXXXXXXXXXXXXXXXXXXXXXHFPLYDSIHNHW 435
            SL++SPSF++K+S   S ++++                            PLYDS   +W
Sbjct: 184  SLIYSPSFLAKYSPSSSSSSSSP---------ALSSFLLLSHPQFYRHRLPLYDSAIGNW 234

Query: 436  R--MXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSRIISYPILPFA 609
            R                        NG             VCNLL  SSR++ +P  PFA
Sbjct: 235  RNLSLTCSILLPYAATTAITLLSAANGLLCFSLPNSSSFLVCNLLVGSSRVLQFPGYPFA 294

Query: 610  FESVTLIPTSNGYKIFVLSSGSSLNSAYVYDSRGTSWARFPGFNPILRLNLNQEGVLCNG 789
            FE +TL+P  +GYKIF+++SGSS N+A+VYDS   SW  F GF+P L  N +Q GV CNG
Sbjct: 295  FEMLTLVPAPDGYKIFMIASGSSSNNAWVYDSGVHSWREFQGFDPTLSDNCHQ-GVYCNG 353

Query: 790  HLFFSTPEAFSIVGFDLESGNWRDSTEELPGNGELTFARLVSNACEGKLYMXXXXXXXXX 969
             L+F T E FSIV FDLESG W  S  ELPG  ELTF +LVS+  EGKLY+         
Sbjct: 354  VLYFCTSEPFSIVCFDLESGVWDRSVVELPG--ELTFVKLVSDG-EGKLYLVGGIGRNGI 410

Query: 970  XXXMKLWGLRGGETGREWMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEGAICVCCYTWP 1149
               MKLW L G      W+ + SLPE MC+K +S+CYHNY+HVYCF+H+  ICVCCYTWP
Sbjct: 411  SKSMKLWELEG----ENWVLVESLPEFMCQKLVSVCYHNYEHVYCFWHQETICVCCYTWP 466

Query: 1150 EVLCYKISRQTWHWLPKCPSLPDKWSCGFKWFSFVPNLYA 1269
            E+L YK++R+TWHWLPKCPSLPDKWSCGF+WFSFVP LYA
Sbjct: 467  EILYYKVARRTWHWLPKCPSLPDKWSCGFRWFSFVPELYA 506


>ref|XP_003557010.1| PREDICTED: F-box/kelch-repeat protein At5g43190-like [Glycine max]
          Length = 359

 Score =  358 bits (920), Expect = 1e-96
 Identities = 185/377 (49%), Positives = 226/377 (59%)
 Frame = +1

Query: 145  MDSQIWRQLPQELIEHILVFLPLKTFFNLRSTCKRFYSLLFSPSFISKHSSLYSLTNNTE 324
            MD  IW +LP E++E+IL FLPLKTF NLRSTCK F+SL+FSP FISKH S  + +  + 
Sbjct: 1    MDPIIWSKLPPEILEYILSFLPLKTFLNLRSTCKGFWSLIFSPPFISKHCSPTASSPFSS 60

Query: 325  NTXXXXXXXXXXXXXXXXXXXXXXXHFPLYDSIHNHWRMXXXXXXXXXXXXXXXXXXXXX 504
                                     HFPLYD     WR                      
Sbjct: 61   --------------FLLLSHPQFHRHFPLYDCTLGTWRNFSLSLSDSFHSFPSFSTLISS 106

Query: 505  NGXXXXXXXXXXXXXVCNLLARSSRIISYPILPFAFESVTLIPTSNGYKIFVLSSGSSLN 684
             G             VCNLLA+SSR I YP      E +T + T  GY IFVL S ++ N
Sbjct: 107  GGLFCLSDSTSCSLLVCNLLAKSSRKIQYPSFSLHLEHLTFVTTPTGYTIFVLFSEAASN 166

Query: 685  SAYVYDSRGTSWARFPGFNPILRLNLNQEGVLCNGHLFFSTPEAFSIVGFDLESGNWRDS 864
             A+VYDS+  +W RF GF P+L  N  Q+GVL NG L+F+TPE FS+V FDL+SG W   
Sbjct: 167  CAFVYDSKVQTWKRFRGFAPVLGDNHQQQGVLFNGGLYFATPEPFSVVMFDLKSGRWERP 226

Query: 865  TEELPGNGELTFARLVSNACEGKLYMXXXXXXXXXXXXMKLWGLRGGETGREWMEIGSLP 1044
              ELP +  LTF RLVS+   GKLY+            +KLW L G   G  W+E+ SLP
Sbjct: 227  VWELPSH-HLTFVRLVSDG-GGKLYLVGGVGSNGISRSIKLWELGGD--GNYWVEVQSLP 282

Query: 1045 EMMCKKFMSICYHNYQHVYCFYHEGAICVCCYTWPEVLCYKISRQTWHWLPKCPSLPDKW 1224
            ++MC+KF+S+CYHNY+HVYCF+HEG IC+CCYTWPE+L Y +SR+TWHWLP+CPSLP K 
Sbjct: 283  DLMCRKFVSVCYHNYEHVYCFWHEGMICICCYTWPEILYYLLSRRTWHWLPRCPSLPLKC 342

Query: 1225 SCGFKWFSFVPNLYALV 1275
            SCGFKWFSFVPNLYA V
Sbjct: 343  SCGFKWFSFVPNLYASV 359


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