BLASTX nr result
ID: Coptis25_contig00017793
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00017793 (499 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004140874.1| PREDICTED: biotin synthase-like [Cucumis sat... 140 3e-54 ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|2... 139 5e-54 ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|2... 138 5e-54 ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera] ... 137 2e-53 ref|XP_003537735.1| PREDICTED: biotin synthase-like [Glycine max] 137 2e-53 >ref|XP_004140874.1| PREDICTED: biotin synthase-like [Cucumis sativus] Length = 385 Score = 140 bits (352), Expect(2) = 3e-54 Identities = 63/68 (92%), Positives = 68/68 (100%) Frame = +1 Query: 1 WRDTVGRKTNFNQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSRE 180 WRDT+GRKTNFNQILDYVKEIREMGMEVCCTLGM+EKQQA++LKKAGLTAYNHNLDTSRE Sbjct: 148 WRDTIGRKTNFNQILDYVKEIREMGMEVCCTLGMIEKQQAIDLKKAGLTAYNHNLDTSRE 207 Query: 181 YYPNVITT 204 YYPN+ITT Sbjct: 208 YYPNIITT 215 Score = 97.1 bits (240), Expect(2) = 3e-54 Identities = 49/69 (71%), Positives = 55/69 (79%) Frame = +2 Query: 293 RSYDERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPV 472 RSYDERL+TL FVR+AGI+VCSGGIIGLGEAE+DRVG ESVPINALV V Sbjct: 216 RSYDERLKTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAV 275 Query: 473 KGTPLENQK 499 KGTPL++QK Sbjct: 276 KGTPLQDQK 284 >ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|222837263|gb|EEE75642.1| predicted protein [Populus trichocarpa] Length = 391 Score = 139 bits (351), Expect(2) = 5e-54 Identities = 63/68 (92%), Positives = 68/68 (100%) Frame = +1 Query: 1 WRDTVGRKTNFNQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSRE 180 WRDT+GRKTNFNQILDYVK+IR+MGMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSRE Sbjct: 141 WRDTIGRKTNFNQILDYVKDIRDMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSRE 200 Query: 181 YYPNVITT 204 YYPN+ITT Sbjct: 201 YYPNIITT 208 Score = 96.7 bits (239), Expect(2) = 5e-54 Identities = 50/69 (72%), Positives = 53/69 (76%) Frame = +2 Query: 293 RSYDERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPV 472 RSYDERLETL VREAGI+VCSGGIIGLGEAE+DRVG ESVPINALV V Sbjct: 209 RSYDERLETLQHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVSV 268 Query: 473 KGTPLENQK 499 KGTPL+ QK Sbjct: 269 KGTPLQEQK 277 >ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|222853348|gb|EEE90895.1| predicted protein [Populus trichocarpa] Length = 382 Score = 138 bits (348), Expect(2) = 5e-54 Identities = 64/68 (94%), Positives = 66/68 (97%) Frame = +1 Query: 1 WRDTVGRKTNFNQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSRE 180 WRDT+GRKTNFNQILDYVKEIR MGMEVCCTLGMLEKQQA ELKKAGLTAYNHNLDTSRE Sbjct: 141 WRDTIGRKTNFNQILDYVKEIRGMGMEVCCTLGMLEKQQAAELKKAGLTAYNHNLDTSRE 200 Query: 181 YYPNVITT 204 YYPN+ITT Sbjct: 201 YYPNIITT 208 Score = 97.8 bits (242), Expect(2) = 5e-54 Identities = 51/69 (73%), Positives = 53/69 (76%) Frame = +2 Query: 293 RSYDERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPV 472 RSYDERLETL VREAGISVCSGGIIGLGEAE+DRVG ESVPINALV V Sbjct: 209 RSYDERLETLEHVREAGISVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAV 268 Query: 473 KGTPLENQK 499 KGTPL+ QK Sbjct: 269 KGTPLQEQK 277 >ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera] gi|297743757|emb|CBI36640.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 137 bits (345), Expect(2) = 2e-53 Identities = 63/68 (92%), Positives = 67/68 (98%) Frame = +1 Query: 1 WRDTVGRKTNFNQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSRE 180 WRDTVGRKTNFNQIL+YVKEIR+MGMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSRE Sbjct: 143 WRDTVGRKTNFNQILEYVKEIRDMGMEVCCTLGMLEKQQAIELKKAGLTAYNHNLDTSRE 202 Query: 181 YYPNVITT 204 YYPN+I T Sbjct: 203 YYPNIIRT 210 Score = 97.4 bits (241), Expect(2) = 2e-53 Identities = 50/69 (72%), Positives = 54/69 (78%) Frame = +2 Query: 293 RSYDERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPV 472 RSYDERLETL VREAGI+VCSGGIIGLGEAE+DRVG ESVPINAL+ V Sbjct: 211 RSYDERLETLQLVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 270 Query: 473 KGTPLENQK 499 KGTPLE+QK Sbjct: 271 KGTPLEDQK 279 >ref|XP_003537735.1| PREDICTED: biotin synthase-like [Glycine max] Length = 374 Score = 137 bits (345), Expect(2) = 2e-53 Identities = 62/68 (91%), Positives = 68/68 (100%) Frame = +1 Query: 1 WRDTVGRKTNFNQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSRE 180 WRDT+GRKTNFNQIL+YVK+IR+MGMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSRE Sbjct: 139 WRDTLGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSRE 198 Query: 181 YYPNVITT 204 YYPN+ITT Sbjct: 199 YYPNIITT 206 Score = 97.4 bits (241), Expect(2) = 2e-53 Identities = 49/69 (71%), Positives = 55/69 (79%) Frame = +2 Query: 293 RSYDERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPV 472 R+YDERL+TL FVR+AGI+VCSGGIIGLGEAE+DRVG ESVPINALV V Sbjct: 207 RTYDERLQTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALVAV 266 Query: 473 KGTPLENQK 499 KGTPLE+QK Sbjct: 267 KGTPLEDQK 275