BLASTX nr result

ID: Coptis25_contig00017767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017767
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycin...   174   9e-42
ref|XP_003525244.1| PREDICTED: dynein light chain LC6, flagellar...   172   3e-41
ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-l...   172   3e-41
emb|CBI26852.3| unnamed protein product [Vitis vinifera]              172   3e-41
gb|ACU17238.1| unknown [Glycine max]                                  170   1e-40

>ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycine max]
           gi|255625837|gb|ACU13263.1| unknown [Glycine max]
          Length = 133

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/95 (87%), Positives = 88/95 (92%)
 Frame = -2

Query: 324 NVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLALALKKEFDSSYGPAWHCIVGT 145
           NVRVRA DM L LQN+AF+CARD LDSMP+KKLDSKRLAL LKKEFD+SYGPAWHCIVGT
Sbjct: 38  NVRVRACDMPLPLQNRAFRCARDLLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVGT 97

Query: 144 SFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 40
           SFGSYVTHS GGF+YFSIDKVYVLLFKT VEPLDH
Sbjct: 98  SFGSYVTHSFGGFVYFSIDKVYVLLFKTAVEPLDH 132


>ref|XP_003525244.1| PREDICTED: dynein light chain LC6, flagellar outer arm-like
           [Glycine max]
          Length = 133

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/95 (87%), Positives = 87/95 (91%)
 Frame = -2

Query: 324 NVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLALALKKEFDSSYGPAWHCIVGT 145
           NVRVRA DM L LQ++AF+CARD LDSMP KKLDSKRLAL LKKEFDSSYGPAWHCIVGT
Sbjct: 38  NVRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGT 97

Query: 144 SFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 40
           SFGSYVTHS GGF+YFSIDKVYVLLFKT VEPLDH
Sbjct: 98  SFGSYVTHSLGGFVYFSIDKVYVLLFKTAVEPLDH 132


>ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-like [Vitis vinifera]
          Length = 127

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/96 (87%), Positives = 90/96 (93%)
 Frame = -2

Query: 327 LNVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLALALKKEFDSSYGPAWHCIVG 148
           LNVRVRASDM L+LQ++AFKCARD+LD+MP K LDSKRLALALKKEFDS YGPAWHCIVG
Sbjct: 33  LNVRVRASDMPLALQSRAFKCARDNLDAMPGK-LDSKRLALALKKEFDSLYGPAWHCIVG 91

Query: 147 TSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 40
           TSFGSYVTHS GGFLYFSIDKVY+LLFKT VEPLDH
Sbjct: 92  TSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDH 127


>emb|CBI26852.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/96 (87%), Positives = 90/96 (93%)
 Frame = -2

Query: 327 LNVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLALALKKEFDSSYGPAWHCIVG 148
           LNVRVRASDM L+LQ++AFKCARD+LD+MP K LDSKRLALALKKEFDS YGPAWHCIVG
Sbjct: 31  LNVRVRASDMPLALQSRAFKCARDNLDAMPGK-LDSKRLALALKKEFDSLYGPAWHCIVG 89

Query: 147 TSFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 40
           TSFGSYVTHS GGFLYFSIDKVY+LLFKT VEPLDH
Sbjct: 90  TSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDH 125


>gb|ACU17238.1| unknown [Glycine max]
          Length = 133

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/95 (86%), Positives = 87/95 (91%)
 Frame = -2

Query: 324 NVRVRASDMSLSLQNQAFKCARDSLDSMPNKKLDSKRLALALKKEFDSSYGPAWHCIVGT 145
           NVRVRA DM L LQ++AF+CARD LDSMP KKLDSKRLAL LKKEFDSSYGPAWHCIVGT
Sbjct: 38  NVRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGT 97

Query: 144 SFGSYVTHSAGGFLYFSIDKVYVLLFKTTVEPLDH 40
           SFGSYVTHS GGF+YFSIDKVYVLLFKT VEPL+H
Sbjct: 98  SFGSYVTHSLGGFVYFSIDKVYVLLFKTAVEPLNH 132


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